| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669213
Identifier: 15669213
GI number: 15669213
Start: 954535
End: 955746
Strand: Direct
Name: 15669213
Synonym: MJ1024
Alternate gene names: NA
Gene position: 954535-955746 (Clockwise)
Preceding gene: 15669212
Following gene: 15669216
Centisome position: 57.33
GC content: 27.23
Gene sequence:
>1212_bases ATGAATAGTGGTGATATAATGAAACTCAATATCAAAAAAATTTTAACTATTGGAAAAAGAGAAGTTCTCAGCAATATAAA AAGGAAACAGTTTTTAATAGCTACTATTATAGGGCCTTTAATTATAATTGCCTTAGCGATAATTGGAAGTTTTATGATGT TTGACATTAAGGAGATAAAAGTTGGCTATGTTGATGAATTTGGCTTAGGTATTCCAAATAAAGTTGTAGAAAATAACTTT GGAAAAAATACAACCATATATTTTATAAAATATGAAAACATTGAAAAAGGCAAAGAGGATGTTTTAAATAAAAGCATAGA TGCTTTAATAGTTATTCCAAAAGATTACTTAGATTCTGGAAAAATAATACTTTACTCAACAACAAAATCACCAAATCCTA TAATTACAGATACTCTAAATAAATTCCTATTAAAAAAGCTTTTAAAAGGTAAGGTTGATAATAAAACATACAATAGAGTT ATAAATCCTATGAATCTTGAAATTTATTCTGTATCTAAAAAAGGATTTGAAAAAGAGACGTTTTTATCTCAATTATTGCC AATTGGATTTGTTTTCTTGTTGTATATGGCTATCTCTTCACTATCAGGAATTATTGTCTCATCAATTATTGAAGAGAAGC AAAATAGAATTATGGAGCTTTTGCTTTGCTATTCATCAGCTGAAAATCTAATGTTTGGTAAAATACTGGGAATTTCGGCT GTTGGTTTATTGCAAATAGGAATTTGGGTGTTGTTTGCTTTACCTATAATAATAACTTATGCAGTTAAAGTCTCTCTGTA TTTAGCAATCTTTGCTTTGATTTATTTTGTATTAGGATACTTGTTTTATTCATCTCTACTATGCGGGTTGTCTTCCTTGT TTTCTCATCCAAAAGATGCATCTCAATTAATATCTCCAATAATAATCATCCAAATTATTCCAATAATGTTTATGAACACG ATAATGGTTAATCCAAATCACTATATGGCTAAAATTCTTTCTTATGTTCCATTTACTGCTCCTTATGCAGTTGTTTTGAG AGCGAGTGTAACTCAGCTACCTTTAATAGAAATTGTATTATCAACAGCAATTATGATTGTTAGTATAGTAATATCCTTTA TCTTATCAATTAAGCTGTTTAAAATTGGTGTTTTGCTGTATGAAGAAAATCTAACATTAAAAAGAGTTATAAAAATTATC TTTAAAAAATAA
Upstream 100 bases:
>100_bases AAAGAGATTCCTTATGAAGAGGCTGTTTTAATTTTAAAAGAAAAGGCAGAAGATGTAATTAAATTTGAGGTTAGATATTC ATTGGAAGATCTATTTTTAG
Downstream 100 bases:
>100_bases TTATTTCTTGTTTTTCAAAATCTCTATTATCTCATCATCTACTGGTTTCATTGCTTTCCCAATTTTTCCAATATTCTCTA TGCATTCTTTAAAGTCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MNSGDIMKLNIKKILTIGKREVLSNIKRKQFLIATIIGPLIIIALAIIGSFMMFDIKEIKVGYVDEFGLGIPNKVVENNF GKNTTIYFIKYENIEKGKEDVLNKSIDALIVIPKDYLDSGKIILYSTTKSPNPIITDTLNKFLLKKLLKGKVDNKTYNRV INPMNLEIYSVSKKGFEKETFLSQLLPIGFVFLLYMAISSLSGIIVSSIIEEKQNRIMELLLCYSSAENLMFGKILGISA VGLLQIGIWVLFALPIIITYAVKVSLYLAIFALIYFVLGYLFYSSLLCGLSSLFSHPKDASQLISPIIIIQIIPIMFMNT IMVNPNHYMAKILSYVPFTAPYAVVLRASVTQLPLIEIVLSTAIMIVSIVISFILSIKLFKIGVLLYEENLTLKRVIKII FKK
Sequences:
>Translated_403_residues MNSGDIMKLNIKKILTIGKREVLSNIKRKQFLIATIIGPLIIIALAIIGSFMMFDIKEIKVGYVDEFGLGIPNKVVENNF GKNTTIYFIKYENIEKGKEDVLNKSIDALIVIPKDYLDSGKIILYSTTKSPNPIITDTLNKFLLKKLLKGKVDNKTYNRV INPMNLEIYSVSKKGFEKETFLSQLLPIGFVFLLYMAISSLSGIIVSSIIEEKQNRIMELLLCYSSAENLMFGKILGISA VGLLQIGIWVLFALPIIITYAVKVSLYLAIFALIYFVLGYLFYSSLLCGLSSLFSHPKDASQLISPIIIIQIIPIMFMNT IMVNPNHYMAKILSYVPFTAPYAVVLRASVTQLPLIEIVLSTAIMIVSIVISFILSIKLFKIGVLLYEENLTLKRVIKII FKK >Mature_403_residues MNSGDIMKLNIKKILTIGKREVLSNIKRKQFLIATIIGPLIIIALAIIGSFMMFDIKEIKVGYVDEFGLGIPNKVVENNF GKNTTIYFIKYENIEKGKEDVLNKSIDALIVIPKDYLDSGKIILYSTTKSPNPIITDTLNKFLLKKLLKGKVDNKTYNRV INPMNLEIYSVSKKGFEKETFLSQLLPIGFVFLLYMAISSLSGIIVSSIIEEKQNRIMELLLCYSSAENLMFGKILGISA VGLLQIGIWVLFALPIIITYAVKVSLYLAIFALIYFVLGYLFYSSLLCGLSSLFSHPKDASQLISPIIIIQIIPIMFMNT IMVNPNHYMAKILSYVPFTAPYAVVLRASVTQLPLIEIVLSTAIMIVSIVISFILSIKLFKIGVLLYEENLTLKRVIKII FKK
Specific function: Unknown
COG id: COG1668
COG function: function code CP; ABC-type Na+ efflux pump, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yhaP
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1024_METJA (Q58430)
Other databases:
- EMBL: L77117 - PIR: G64427 - RefSeq: NP_248018.1 - GeneID: 1451921 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1024 - NMPDR: fig|243232.1.peg.1055 - TIGR: MJ1024 - HOGENOM: HBG541048 - OMA: ENRIMEV - ProtClustDB: CLSK876429 - BioCyc: MJAN243232:MJ_1024-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45295; Mature: 45295
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xdb48674)-; HASH(0xcd4a968)-; HASH(0xd386f18)-; HASH(0xb7f6e70)-; HASH(0xd4168f4)-; HASH(0xc6af098)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSGDIMKLNIKKILTIGKREVLSNIKRKQFLIATIIGPLIIIALAIIGSFMMFDIKEIK CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGYVDEFGLGIPNKVVENNFGKNTTIYFIKYENIEKGKEDVLNKSIDALIVIPKDYLDSG CCCCHHCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCHHHHHCCCCCEEEEEEHHHCCCC KIILYSTTKSPNPIITDTLNKFLLKKLLKGKVDNKTYNRVINPMNLEIYSVSKKGFEKET CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHH FLSQLLPIGFVFLLYMAISSLSGIIVSSIIEEKQNRIMELLLCYSSAENLMFGKILGISA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VGLLQIGIWVLFALPIIITYAVKVSLYLAIFALIYFVLGYLFYSSLLCGLSSLFSHPKDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH SQLISPIIIIQIIPIMFMNTIMVNPNHYMAKILSYVPFTAPYAVVLRASVTQLPLIEIVL HHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH STAIMIVSIVISFILSIKLFKIGVLLYEENLTLKRVIKIIFKK HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCH >Mature Secondary Structure MNSGDIMKLNIKKILTIGKREVLSNIKRKQFLIATIIGPLIIIALAIIGSFMMFDIKEIK CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGYVDEFGLGIPNKVVENNFGKNTTIYFIKYENIEKGKEDVLNKSIDALIVIPKDYLDSG CCCCHHCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCHHHHHCCCCCEEEEEEHHHCCCC KIILYSTTKSPNPIITDTLNKFLLKKLLKGKVDNKTYNRVINPMNLEIYSVSKKGFEKET CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHH FLSQLLPIGFVFLLYMAISSLSGIIVSSIIEEKQNRIMELLLCYSSAENLMFGKILGISA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VGLLQIGIWVLFALPIIITYAVKVSLYLAIFALIYFVLGYLFYSSLLCGLSSLFSHPKDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH SQLISPIIIIQIIPIMFMNTIMVNPNHYMAKILSYVPFTAPYAVVLRASVTQLPLIEIVL HHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH STAIMIVSIVISFILSIKLFKIGVLLYEENLTLKRVIKIIFKK HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087