| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669187
Identifier: 15669187
GI number: 15669187
Start: 926008
End: 926733
Strand: Reverse
Name: 15669187
Synonym: MJ0998
Alternate gene names: NA
Gene position: 926733-926008 (Counterclockwise)
Preceding gene: 15669188
Following gene: 15669185
Centisome position: 55.66
GC content: 27.41
Gene sequence:
>726_bases TTGAAGTCCCTATATGCCCTTATTTTCTTGTTATTTGTTATTGTCGTTTCATATATTTTTAATGGATTGTGGTCTGTATT TAATATAAAGCACGTCTTTTGGGTTAATCTTTTTTTATTGATAGCTTTTCATCCACAACATTTAGATGGTTTAATTATTC TTCTCTTAATTCCATTAAAAATTTTCAGTAATTTTAAATTAAAACTTCAATGTATTATAGCACTGGTTGGAATACTATTA ACAATAATTAAAGGAGTAATAAAATCAGGTTTTGGATGGATTTTGAGGATTCTATTCTTTTTTGTCAGAATGATGACAGT TTCCTTTATTAATTTAGTTGTGTTTTCGATTTTACTTACAAGTGTTTATGTACTGGGTTATGTTGCATTTTTAAAACCAG ATGATATTCAATTTGGAACGTTATATACTGCATTTGGAGGTCTTGCACTTTTAGGAGCAGGAATAAAAATCATACAACAC TTTATTAAACAGTCGGAGGAAATTGCACAAGAAGAATTTAAAAAGTGGTATGAAACTGAAGTTAAGAATTTTATGTATTC GTTATTTATAACTGCAAAAAATGCTTTTCCAAAATTTTTAGATGATTTGTTAGCTAAGGGAGTGGTTTCACAGGAGGAAT ATCAAAATTTAATAAAATTATATTCCCACATTTTAGCTAGAATTTTGAAAAATGATGAAGAGAAAATGAAAATTCCAACG TTTTAG
Upstream 100 bases:
>100_bases TTAATGTATTTTTATATATAGTGGTGTCTAAATGGGAAAAATAGATACTGACACCCCTATAGAGATTGTTAAGGAGAGTA TATGATTCTACTTTGATATA
Downstream 100 bases:
>100_bases AAGTAAAACGAATTAATTATGTGAAATATGTAATAATTATTGCATCATTTTTTAAAGAACTATTAGATGAAATATTCTCA GAAAATGAACCAAAACTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MKSLYALIFLLFVIVVSYIFNGLWSVFNIKHVFWVNLFLLIAFHPQHLDGLIILLLIPLKIFSNFKLKLQCIIALVGILL TIIKGVIKSGFGWILRILFFFVRMMTVSFINLVVFSILLTSVYVLGYVAFLKPDDIQFGTLYTAFGGLALLGAGIKIIQH FIKQSEEIAQEEFKKWYETEVKNFMYSLFITAKNAFPKFLDDLLAKGVVSQEEYQNLIKLYSHILARILKNDEEKMKIPT F
Sequences:
>Translated_241_residues MKSLYALIFLLFVIVVSYIFNGLWSVFNIKHVFWVNLFLLIAFHPQHLDGLIILLLIPLKIFSNFKLKLQCIIALVGILL TIIKGVIKSGFGWILRILFFFVRMMTVSFINLVVFSILLTSVYVLGYVAFLKPDDIQFGTLYTAFGGLALLGAGIKIIQH FIKQSEEIAQEEFKKWYETEVKNFMYSLFITAKNAFPKFLDDLLAKGVVSQEEYQNLIKLYSHILARILKNDEEKMKIPT F >Mature_241_residues MKSLYALIFLLFVIVVSYIFNGLWSVFNIKHVFWVNLFLLIAFHPQHLDGLIILLLIPLKIFSNFKLKLQCIIALVGILL TIIKGVIKSGFGWILRILFFFVRMMTVSFINLVVFSILLTSVYVLGYVAFLKPDDIQFGTLYTAFGGLALLGAGIKIIQH FIKQSEEIAQEEFKKWYETEVKNFMYSLFITAKNAFPKFLDDLLAKGVVSQEEYQNLIKLYSHILARILKNDEEKMKIPT F
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y998_METJA (Q58404)
Other databases:
- EMBL: L77117 - PIR: E64424 - RefSeq: NP_247992.1 - GeneID: 1451895 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0998 - NMPDR: fig|243232.1.peg.1029 - TIGR: MJ0998 - BioCyc: MJAN243232:MJ_0998-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27835; Mature: 27835
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd28ca38)-; HASH(0xde552a8)-; HASH(0xbe52854)-; HASH(0xde4bdac)-; HASH(0xdb4e0f8)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLYALIFLLFVIVVSYIFNGLWSVFNIKHVFWVNLFLLIAFHPQHLDGLIILLLIPLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH IFSNFKLKLQCIIALVGILLTIIKGVIKSGFGWILRILFFFVRMMTVSFINLVVFSILLT HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVYVLGYVAFLKPDDIQFGTLYTAFGGLALLGAGIKIIQHFIKQSEEIAQEEFKKWYETE HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKNFMYSLFITAKNAFPKFLDDLLAKGVVSQEEYQNLIKLYSHILARILKNDEEKMKIPT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC F H >Mature Secondary Structure MKSLYALIFLLFVIVVSYIFNGLWSVFNIKHVFWVNLFLLIAFHPQHLDGLIILLLIPLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH IFSNFKLKLQCIIALVGILLTIIKGVIKSGFGWILRILFFFVRMMTVSFINLVVFSILLT HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVYVLGYVAFLKPDDIQFGTLYTAFGGLALLGAGIKIIQHFIKQSEEIAQEEFKKWYETE HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKNFMYSLFITAKNAFPKFLDDLLAKGVVSQEEYQNLIKLYSHILARILKNDEEKMKIPT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC F H
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087