| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669169
Identifier: 15669169
GI number: 15669169
Start: 911715
End: 912308
Strand: Reverse
Name: 15669169
Synonym: MJ0979
Alternate gene names: NA
Gene position: 912308-911715 (Counterclockwise)
Preceding gene: 15669170
Following gene: 15669165
Centisome position: 54.79
GC content: 34.51
Gene sequence:
>594_bases ATGTTACCAAAGAAAATTGACTATATAAAAATAGCCCTCATTGTTGTAGGGATTATTGCTTTGTTTCTCCCATGGCTCAC AATCTCTGCCTCTACGATAAACATAAAGACAGACGAAGGAATTCATTTATCTGTAAATCTCGCACCATTTAGAGTTTCAT CAGATATTAAATCTGATACAAACAACATATTTGTAGAAATGATGATGCCATATGTCAAACAATACTTTGACATGGCTGTT AAAGAAAAAATGTCAACATTTATGATGATATTTGGTATAATTCCAATAATCCTCTACATTGCCTCAATATTCGTTGATAA AAAAGCGGTTGTAGTTGGAGCTGGAATAGCAGGAATTACCTGTGCTTCAATATTTGTTGTGTTATTCACAGTAGGGCTGA ACTCATCAGATTCTGGATTAGCTCTTACAGGAGGTAAAGAAGTCACTCCAATAGATTTAATAACGGGAGTGGTCAATGAA AAATCCAGTTATCTCTCTAAGGATATTATAAAGATTCAGGTGGGGACAGGTTGGTATCTAACAATGATAATTGGCTTGGC GTTAATTGCATATCCTTTCATTAGGAAGGTTTAA
Upstream 100 bases:
>100_bases GTTCTACTTTACATTACTTAGATAAAGCATAAATTAATACATAAAAAGAGTATCATTTACCATATAATCTAAATTTAAAA AATTAAAGCGAGGTGAAAAA
Downstream 100 bases:
>100_bases TTTTTAAATTTCCTCTATTTTTACTTACTCTTCAACTCTTATAACACTCCCAAAACCCTTGGAAACCTTTCTTCCAATTC CTAAATAATTAGGAATGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MLPKKIDYIKIALIVVGIIALFLPWLTISASTINIKTDEGIHLSVNLAPFRVSSDIKSDTNNIFVEMMMPYVKQYFDMAV KEKMSTFMMIFGIIPIILYIASIFVDKKAVVVGAGIAGITCASIFVVLFTVGLNSSDSGLALTGGKEVTPIDLITGVVNE KSSYLSKDIIKIQVGTGWYLTMIIGLALIAYPFIRKV
Sequences:
>Translated_197_residues MLPKKIDYIKIALIVVGIIALFLPWLTISASTINIKTDEGIHLSVNLAPFRVSSDIKSDTNNIFVEMMMPYVKQYFDMAV KEKMSTFMMIFGIIPIILYIASIFVDKKAVVVGAGIAGITCASIFVVLFTVGLNSSDSGLALTGGKEVTPIDLITGVVNE KSSYLSKDIIKIQVGTGWYLTMIIGLALIAYPFIRKV >Mature_197_residues MLPKKIDYIKIALIVVGIIALFLPWLTISASTINIKTDEGIHLSVNLAPFRVSSDIKSDTNNIFVEMMMPYVKQYFDMAV KEKMSTFMMIFGIIPIILYIASIFVDKKAVVVGAGIAGITCASIFVVLFTVGLNSSDSGLALTGGKEVTPIDLITGVVNE KSSYLSKDIIKIQVGTGWYLTMIIGLALIAYPFIRKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y979_METJA (Q58389)
Other databases:
- EMBL: L77117 - PIR: C64422 - RefSeq: NP_247974.1 - GeneID: 1451877 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0979 - NMPDR: fig|243232.1.peg.1011 - TIGR: MJ0979 - ProtClustDB: CLSK2749944 - BioCyc: MJAN243232:MJ_0979-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21520; Mature: 21520
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd8f1528)-; HASH(0xdd4ccac)-; HASH(0xb964968)-; HASH(0xcb530e4)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPKKIDYIKIALIVVGIIALFLPWLTISASTINIKTDEGIHLSVNLAPFRVSSDIKSDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECEEECCCCCCCC NNIFVEMMMPYVKQYFDMAVKEKMSTFMMIFGIIPIILYIASIFVDKKAVVVGAGIAGIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHH CASIFVVLFTVGLNSSDSGLALTGGKEVTPIDLITGVVNEKSSYLSKDIIKIQVGTGWYL HHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHCCEEEEEECCCHHH TMIIGLALIAYPFIRKV HHHHHHHHHHHHHHHCH >Mature Secondary Structure MLPKKIDYIKIALIVVGIIALFLPWLTISASTINIKTDEGIHLSVNLAPFRVSSDIKSDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECEEECCCCCCCC NNIFVEMMMPYVKQYFDMAVKEKMSTFMMIFGIIPIILYIASIFVDKKAVVVGAGIAGIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHH CASIFVVLFTVGLNSSDSGLALTGGKEVTPIDLITGVVNEKSSYLSKDIIKIQVGTGWYL HHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHCCEEEEEECCCHHH TMIIGLALIAYPFIRKV HHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087