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The map label for this gene is rps3Ae

Identifier: 15669170

GI number: 15669170

Start: 912931

End: 913599

Strand: Reverse

Name: rps3Ae

Synonym: MJ0980

Alternate gene names: 15669170

Gene position: 913599-912931 (Counterclockwise)

Preceding gene: 15669171

Following gene: 15669169

Centisome position: 54.87

GC content: 35.28

Gene sequence:

>669_bases
ATGGCTACTGCAAGAACTGCAAGGTCAAGAAGGAAAGTAAGAAAAGTGAGAGATAAATGGAAAGAGAAAGTATGGTATGA
AATTTATGCTACACCAGAATTTGGAGGAGTATTTATTGGCTACACCCCAGCAAATGACCCAAGCTTAGTTTTAGGAAGAG
TTGCTGAGACAAGCTTAAGAGATTTAACAGGAGACCCAACAAAACACATGCACAGAGTTTATTTCAAAATCTTTGGAGTT
ACAGGAAATAAGGCAATTGCTCAATATTATGGACATGATACAACAAGAGAATTTATGAAGTCACAAATCAGAAGAAGAAG
AAGTAGAATTGACGCTATCCTTGATGTTAAAACCCAAGACGGCCATAAGATAAGAACAAAGGCAATGGTCTTAACAGCTT
ACAGAGCAAACACAAAACAAAAATCAGACATTAGAAAGAAGATGGAAGAGATTATAAAGGCAATGGCTAAAGAAAAGACA
TTCCCACAGTATGTTCAGGCAATGTTGTTTGGAGAAATGGCTGAGAAGATAAAGAATGAATGTAAGAAGATATTCCCAAT
TAAAAACGTTATCATCTACAAATCAGAAGTTTTATCATTAGCTAAGAAAGAGGAAAATGAAGGATTTGTAAAAGAAGCTG
AAGAAGAAACTGCTGAAGCTCAAGAATAA

Upstream 100 bases:

>100_bases
GGGGATGTAACAAGACCTGTAAGAAACTATGTTGATTTATCTGAGTTCTATAAGGGTGAATAATTCCTAAAACCACAACT
AAATTTTTTAAGGTGAAAAG

Downstream 100 bases:

>100_bases
ATAATTTTTACTATTTTTTAGTTTTTTAATATTGATATTCGATTTTTTAATTTTGTTTTCTTGCTTCCTACGAGCGTAGC
GAGTAGGTTAAATAAACTCT

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MATARTARSRRKVRKVRDKWKEKVWYEIYATPEFGGVFIGYTPANDPSLVLGRVAETSLRDLTGDPTKHMHRVYFKIFGV
TGNKAIAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQDGHKIRTKAMVLTAYRANTKQKSDIRKKMEEIIKAMAKEKT
FPQYVQAMLFGEMAEKIKNECKKIFPIKNVIIYKSEVLSLAKKEENEGFVKEAEEETAEAQE

Sequences:

>Translated_222_residues
MATARTARSRRKVRKVRDKWKEKVWYEIYATPEFGGVFIGYTPANDPSLVLGRVAETSLRDLTGDPTKHMHRVYFKIFGV
TGNKAIAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQDGHKIRTKAMVLTAYRANTKQKSDIRKKMEEIIKAMAKEKT
FPQYVQAMLFGEMAEKIKNECKKIFPIKNVIIYKSEVLSLAKKEENEGFVKEAEEETAEAQE
>Mature_221_residues
ATARTARSRRKVRKVRDKWKEKVWYEIYATPEFGGVFIGYTPANDPSLVLGRVAETSLRDLTGDPTKHMHRVYFKIFGVT
GNKAIAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQDGHKIRTKAMVLTAYRANTKQKSDIRKKMEEIIKAMAKEKTF
PQYVQAMLFGEMAEKIKNECKKIFPIKNVIIYKSEVLSLAKKEENEGFVKEAEEETAEAQE

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family

Homologues:

Organism=Homo sapiens, GI4506723, Length=212, Percent_Identity=29.2452830188679, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323474, Length=201, Percent_Identity=25.8706467661692, Blast_Score=78, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6323577, Length=197, Percent_Identity=26.3959390862944, Blast_Score=78, Evalue=1e-15,
Organism=Drosophila melanogaster, GI17864162, Length=201, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24638499, Length=158, Percent_Identity=27.2151898734177, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS3A_METJA (P54059)

Other databases:

- EMBL:   L77117
- PIR:   D64422
- RefSeq:   NP_247975.1
- ProteinModelPortal:   P54059
- GeneID:   1451878
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0980
- NMPDR:   fig|243232.1.peg.1012
- TIGR:   MJ0980
- HOGENOM:   HBG402643
- OMA:   GHDTTRE
- ProtClustDB:   PRK04057
- BioCyc:   MJAN243232:MJ_0980-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00359
- InterPro:   IPR001593
- InterPro:   IPR018281
- PANTHER:   PTHR11830

Pfam domain/function: PF01015 Ribosomal_S3Ae

EC number: NA

Molecular weight: Translated: 25777; Mature: 25646

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS01191 RIBOSOMAL_S3AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATARTARSRRKVRKVRDKWKEKVWYEIYATPEFGGVFIGYTPANDPSLVLGRVAETSLR
CCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHH
DLTGDPTKHMHRVYFKIFGVTGNKAIAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQD
HCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GHKIRTKAMVLTAYRANTKQKSDIRKKMEEIIKAMAKEKTFPQYVQAMLFGEMAEKIKNE
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
CKKIFPIKNVIIYKSEVLSLAKKEENEGFVKEAEEETAEAQE
HHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATARTARSRRKVRKVRDKWKEKVWYEIYATPEFGGVFIGYTPANDPSLVLGRVAETSLR
CCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHH
DLTGDPTKHMHRVYFKIFGVTGNKAIAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQD
HCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GHKIRTKAMVLTAYRANTKQKSDIRKKMEEIIKAMAKEKTFPQYVQAMLFGEMAEKIKNE
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
CKKIFPIKNVIIYKSEVLSLAKKEENEGFVKEAEEETAEAQE
HHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087