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The map label for this gene is ychE [C]

Identifier: 15669162

GI number: 15669162

Start: 905804

End: 906490

Strand: Direct

Name: ychE [C]

Synonym: MJ0972

Alternate gene names: 15669162

Gene position: 905804-906490 (Clockwise)

Preceding gene: 15669161

Following gene: 15669166

Centisome position: 54.4

GC content: 32.75

Gene sequence:

>687_bases
TTGGTGGGTTATTCTGGGGAGCATTTTATATTCAATGTGGTGAAATATATGGATATTCTTAACTTCTACATCTATGGATT
TGTTTCTCTTTTTATTACAATAGACCCAATTGGCTTAATTCCAATAGTGCATTCTCTAACCTATCCCTATCCAAAAGAAC
AGAGAATTAGAATTATCAAAAAGGCTATAATCTCATCAACGGTAGTTTTATTGTTATTTGCTTTATTTGGGAATTATATT
TTTGGCTATTTTGGGATTACAATAGATGCGTTTAGAGTAGCTGGGGGAATTTTGCTCTTTAAAATAGCTTGGGACATGCT
TCACGCAGAAATTCCAAAAACAAAGCACAAACCAGATGAAAGATTAGACCTTGAAGATATTGATAGTATAGTTTATGTCC
CATTGGCTATTCCTTTAATCTCTGGCCCTGGAGCTATAACAACAACCATGATTTTGATTAGCAAAACCCAGAGTATCTTA
GAGAAAGGGGTTGTTGTTCTCTCTATATTATCAGCTATGTTAGTTTCTGGAATCATTTTATCATTAACTGACTTTATAAT
TAGAAGAGTTAATATTTATGGCATTAACGCCTTTGTAAGAATTATGGGATTGCTATTAGTAGCTATCTCAGTGCAAATAA
TATTTACTGGAATAGTTGGGCTATATAATAGCATTAGCGTTCAATAA

Upstream 100 bases:

>100_bases
AATTATTAAAAGAGAGAAAAAATAGATTCATTTCTAAAGTAGGTCAAATACTGGAATTATTTATAAATGAAAAAACTTTA
GGATCAATAACACTATTAGT

Downstream 100 bases:

>100_bases
ATTACTTTTTTTCTTTATTTTCTAATATTTTCTTTAATTCTTTCATTTTTGGTGGTAATTCTTTCCATCTCCAAAATCCT
CTTAAAATCTCATCCTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVGYSGEHFIFNVVKYMDILNFYIYGFVSLFITIDPIGLIPIVHSLTYPYPKEQRIRIIKKAIISSTVVLLLFALFGNYI
FGYFGITIDAFRVAGGILLFKIAWDMLHAEIPKTKHKPDERLDLEDIDSIVYVPLAIPLISGPGAITTTMILISKTQSIL
EKGVVVLSILSAMLVSGIILSLTDFIIRRVNIYGINAFVRIMGLLLVAISVQIIFTGIVGLYNSISVQ

Sequences:

>Translated_228_residues
MVGYSGEHFIFNVVKYMDILNFYIYGFVSLFITIDPIGLIPIVHSLTYPYPKEQRIRIIKKAIISSTVVLLLFALFGNYI
FGYFGITIDAFRVAGGILLFKIAWDMLHAEIPKTKHKPDERLDLEDIDSIVYVPLAIPLISGPGAITTTMILISKTQSIL
EKGVVVLSILSAMLVSGIILSLTDFIIRRVNIYGINAFVRIMGLLLVAISVQIIFTGIVGLYNSISVQ
>Mature_228_residues
MVGYSGEHFIFNVVKYMDILNFYIYGFVSLFITIDPIGLIPIVHSLTYPYPKEQRIRIIKKAIISSTVVLLLFALFGNYI
FGYFGITIDAFRVAGGILLFKIAWDMLHAEIPKTKHKPDERLDLEDIDSIVYVPLAIPLISGPGAITTTMILISKTQSIL
EKGVVVLSILSAMLVSGIILSLTDFIIRRVNIYGINAFVRIMGLLLVAISVQIIFTGIVGLYNSISVQ

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family

Homologues:

Organism=Escherichia coli, GI1787494, Length=201, Percent_Identity=35.3233830845771, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1789842, Length=200, Percent_Identity=30.5, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787809, Length=157, Percent_Identity=34.3949044585987, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y972_METJA (Q58382)

Other databases:

- EMBL:   L77117
- PIR:   D64421
- RefSeq:   NP_247967.1
- ProteinModelPortal:   Q58382
- GeneID:   1451870
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0972
- NMPDR:   fig|243232.1.peg.1004
- TIGR:   MJ0972
- HOGENOM:   HBG731519
- OMA:   NAFVRIM
- ProtClustDB:   CLSK796676
- BioCyc:   MJAN243232:MJ_0972-MONOMER
- InterPro:   IPR002771
- TIGRFAMs:   TIGR00427

Pfam domain/function: PF01914 MarC

EC number: NA

Molecular weight: Translated: 25361; Mature: 25361

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdb2882c)-; HASH(0xd04d1e0)-; HASH(0xdd77820)-; HASH(0xdd737d8)-; HASH(0xdd77814)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGYSGEHFIFNVVKYMDILNFYIYGFVSLFITIDPIGLIPIVHSLTYPYPKEQRIRIIK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH
KAIISSTVVLLLFALFGNYIFGYFGITIDAFRVAGGILLFKIAWDMLHAEIPKTKHKPDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RLDLEDIDSIVYVPLAIPLISGPGAITTTMILISKTQSILEKGVVVLSILSAMLVSGIIL
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLTDFIIRRVNIYGINAFVRIMGLLLVAISVQIIFTGIVGLYNSISVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MVGYSGEHFIFNVVKYMDILNFYIYGFVSLFITIDPIGLIPIVHSLTYPYPKEQRIRIIK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH
KAIISSTVVLLLFALFGNYIFGYFGITIDAFRVAGGILLFKIAWDMLHAEIPKTKHKPDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RLDLEDIDSIVYVPLAIPLISGPGAITTTMILISKTQSILEKGVVVLSILSAMLVSGIIL
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLTDFIIRRVNIYGINAFVRIMGLLLVAISVQIIFTGIVGLYNSISVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087