| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669166
Identifier: 15669166
GI number: 15669166
Start: 908462
End: 909562
Strand: Direct
Name: 15669166
Synonym: MJ0976
Alternate gene names: NA
Gene position: 908462-909562 (Clockwise)
Preceding gene: 15669162
Following gene: 15669167
Centisome position: 54.56
GC content: 24.34
Gene sequence:
>1101_bases ATGAGTGAAGATTCAAATCCAAAAAATGACTTAAAACTAAAAATGTATGAGACATTCAGAAGCCATATTGAAAGGGCAGA GAACTCTTTTTGGACATATATGTTGTTTTATTTACAGTTTTTAGTAGGGATAAACGGTGCTGTTGGAATATTGTGTAGAT ATTTGAGTAATAACCTTCAGAACTTTCCTACTGAAATTATTATTGCTTTTCTGGCTTTGGTAAATATTTTACTTTCACTT ATTGGAATAATTGTTATAATTGAAAGAGGAAAATGGTTCTTTAGGAATATGATATTAACTGTTAATTTAGAAAGGTATAT TTTAAAAGAAGAGCATATAAAAATAATTCCCAAAAGATATTCTAAATTTGATAATTTTAATAAAGTTATTGACACTACTG GAAGAATATTTATTTCAATATTTATTGGAATTTACATGATTTCAGTGATTGCTCTTGGATATCTTGCTAATAGTTGTAAA ACAATTATTTTATTTGGGACAGGATTTTTTATAATAGTTGTGATTATCTATTTTTTAGATTTATTAGATTGGATATATAG AAGAATAGACTCAAACGAATATCGCAAAGTGATTGGTGTTGTATTATTTATATCATTTATACCACCATTGATGAATTATT TCATTTATGATATAATAAACCTAATATGTTCTTATATCCCAGAAAGTTTTATTGTAGCAATGATTGTTATACTTATATTT GTAATAATAGATGTCTATTATAATGCAAAAAAACATATTGAAAATACAATAATAATGTTGAGTTTAGAGAGAACTGTTAA TGATATCGATGATATCATAAAAATATTGAAAAACATTAGATTAGATGATACAAAAAAAGAAGAATTAAAGAAAAAACTTA GAAAAATAAAAAAACTCATTGAAAATGTTATAAAATTACTCGGAGGGACTTCAGAAAATGGAACTCAAAATAACAATTTA GAAGAAGCAAAAAGTAAAATTACTGAAGCATGTAGGAAGATTTCCGGAAATAACATTTTTGAAGCAATAAATGAACTAAA TGAAGCAAAGTATATTATAAACAATAAAATTAATGAATTAACTCAATCAGATAGTTCTTAA
Upstream 100 bases:
>100_bases CATTTAAAATTTCATGCTATTAAAATTATTTATAAGTTTGGAATTTTATTATTTGATTATTTAGTTAGGTTATGAACTTG AAAATATAGGTGGGGGATTT
Downstream 100 bases:
>100_bases ATAATTTAAAGAAATAAACACAGTGAAACTATGGAAAATTGGGTAGAATTGAAAAAAGGAGCTAAGGTATTGCAAAACAA CAAAAACAACAAAATTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MSEDSNPKNDLKLKMYETFRSHIERAENSFWTYMLFYLQFLVGINGAVGILCRYLSNNLQNFPTEIIIAFLALVNILLSL IGIIVIIERGKWFFRNMILTVNLERYILKEEHIKIIPKRYSKFDNFNKVIDTTGRIFISIFIGIYMISVIALGYLANSCK TIILFGTGFFIIVVIIYFLDLLDWIYRRIDSNEYRKVIGVVLFISFIPPLMNYFIYDIINLICSYIPESFIVAMIVILIF VIIDVYYNAKKHIENTIIMLSLERTVNDIDDIIKILKNIRLDDTKKEELKKKLRKIKKLIENVIKLLGGTSENGTQNNNL EEAKSKITEACRKISGNNIFEAINELNEAKYIINNKINELTQSDSS
Sequences:
>Translated_366_residues MSEDSNPKNDLKLKMYETFRSHIERAENSFWTYMLFYLQFLVGINGAVGILCRYLSNNLQNFPTEIIIAFLALVNILLSL IGIIVIIERGKWFFRNMILTVNLERYILKEEHIKIIPKRYSKFDNFNKVIDTTGRIFISIFIGIYMISVIALGYLANSCK TIILFGTGFFIIVVIIYFLDLLDWIYRRIDSNEYRKVIGVVLFISFIPPLMNYFIYDIINLICSYIPESFIVAMIVILIF VIIDVYYNAKKHIENTIIMLSLERTVNDIDDIIKILKNIRLDDTKKEELKKKLRKIKKLIENVIKLLGGTSENGTQNNNL EEAKSKITEACRKISGNNIFEAINELNEAKYIINNKINELTQSDSS >Mature_365_residues SEDSNPKNDLKLKMYETFRSHIERAENSFWTYMLFYLQFLVGINGAVGILCRYLSNNLQNFPTEIIIAFLALVNILLSLI GIIVIIERGKWFFRNMILTVNLERYILKEEHIKIIPKRYSKFDNFNKVIDTTGRIFISIFIGIYMISVIALGYLANSCKT IILFGTGFFIIVVIIYFLDLLDWIYRRIDSNEYRKVIGVVLFISFIPPLMNYFIYDIINLICSYIPESFIVAMIVILIFV IIDVYYNAKKHIENTIIMLSLERTVNDIDDIIKILKNIRLDDTKKEELKKKLRKIKKLIENVIKLLGGTSENGTQNNNLE EAKSKITEACRKISGNNIFEAINELNEAKYIINNKINELTQSDSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y976_METJA (Q58386)
Other databases:
- EMBL: L77117 - PIR: H64421 - RefSeq: NP_247971.1 - GeneID: 1451874 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0976 - NMPDR: fig|243232.1.peg.1008 - TIGR: MJ0976 - BioCyc: MJAN243232:MJ_0976-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42588; Mature: 42457
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd26d0b8)-; HASH(0xd3cf784)-; HASH(0xd8814cc)-; HASH(0xb26afbc)-; HASH(0xd15b758)-; HASH(0xd926e2c)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDSNPKNDLKLKMYETFRSHIERAENSFWTYMLFYLQFLVGINGAVGILCRYLSNNLQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH NFPTEIIIAFLALVNILLSLIGIIVIIERGKWFFRNMILTVNLERYILKEEHIKIIPKRY HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHH SKFDNFNKVIDTTGRIFISIFIGIYMISVIALGYLANSCKTIILFGTGFFIIVVIIYFLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH LLDWIYRRIDSNEYRKVIGVVLFISFIPPLMNYFIYDIINLICSYIPESFIVAMIVILIF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VIIDVYYNAKKHIENTIIMLSLERTVNDIDDIIKILKNIRLDDTKKEELKKKLRKIKKLI HHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ENVIKLLGGTSENGTQNNNLEEAKSKITEACRKISGNNIFEAINELNEAKYIINNKINEL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TQSDSS HCCCCH >Mature Secondary Structure SEDSNPKNDLKLKMYETFRSHIERAENSFWTYMLFYLQFLVGINGAVGILCRYLSNNLQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH NFPTEIIIAFLALVNILLSLIGIIVIIERGKWFFRNMILTVNLERYILKEEHIKIIPKRY HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHH SKFDNFNKVIDTTGRIFISIFIGIYMISVIALGYLANSCKTIILFGTGFFIIVVIIYFLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH LLDWIYRRIDSNEYRKVIGVVLFISFIPPLMNYFIYDIINLICSYIPESFIVAMIVILIF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VIIDVYYNAKKHIENTIIMLSLERTVNDIDDIIKILKNIRLDDTKKEELKKKLRKIKKLI HHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ENVIKLLGGTSENGTQNNNLEEAKSKITEACRKISGNNIFEAINELNEAKYIINNKINEL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TQSDSS HCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087