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The map label for this gene is ybbM [C]

Identifier: 15669128

GI number: 15669128

Start: 867469

End: 868221

Strand: Reverse

Name: ybbM [C]

Synonym: MJ0938

Alternate gene names: 15669128

Gene position: 868221-867469 (Counterclockwise)

Preceding gene: 15669133

Following gene: 15669118

Centisome position: 52.15

GC content: 31.08

Gene sequence:

>753_bases
TTGATTATAAAAGTTATGGTGATGTTATTGATAGAGCTTACTTATGCCTTTATTTTTGTTATTATTGCAGTTCTTATTGC
ATATAGGGAAAAGTTGGGCATTGAGAAAAAAATCCTTTATGTGTCAATTTTAGCTTTAATCCAGCTGTTTATTTTAGGAT
TTGTTTTGCTCTATATATTTTCATTTGGAATGGTTGGGGCATTTTTAATGATTGGTGTGATGATTACCTTAGCATCCTAT
CTTATAATGAGAGAAATTAACTTAAAAAATAAAACAAAACTCTTTATTTGTCTATTTATTACGTTTTTAACAACTACAAT
AGTTTCATTGGCAGTATTAACAATTCCAAAGGTTGTCAAATTTGAGCCGATATATGTAATTCCACTAATGGGAATGGTCA
TTGGAAATACAATGAACACCATCCATTTAGCATTAGATAAAATAATAGACATGGTTAAATCAGAGAGGGATATTTTGTGG
GGATATTTAGCTTTAGGAGCTACTGAAATAGAAGCATTAAGACCATTTATAAAAAATGCTGTAAAGTCAGCAGTAATACC
TCAAATGAATAGAACAAAGTCAGTTGGGGTTATATTTATCCCAGGGGCTATGGTAGGGATGTTGTTGAGTGGAGCAAATC
CCATATATGCTGCAGAGATTCAAATTATCATTATGTGGATGATTCTAAGCTCTGCAGTAATTTCTGGGATTTTGATATGC
TACCTAATGTATAAAGAGATTATTAGAGCATAA

Upstream 100 bases:

>100_bases
TTCATAGGTTATTCCCTTAAAGGTTATCTCCCAATCCATGGGCATCACTTTAAATATAATTTTTATGATATTATTTTATA
TTTGACAGAATTCAATAAAA

Downstream 100 bases:

>100_bases
AAAAGGTTTTAAAATTTAATTAAATTTTATCTTCTTAATTCGTTCATCTTCTCTATTCTCTTTTTAATTAACTCTTTTTT
ACCAATATCACTTCTGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIIKVMVMLLIELTYAFIFVIIAVLIAYREKLGIEKKILYVSILALIQLFILGFVLLYIFSFGMVGAFLMIGVMITLASY
LIMREINLKNKTKLFICLFITFLTTTIVSLAVLTIPKVVKFEPIYVIPLMGMVIGNTMNTIHLALDKIIDMVKSERDILW
GYLALGATEIEALRPFIKNAVKSAVIPQMNRTKSVGVIFIPGAMVGMLLSGANPIYAAEIQIIIMWMILSSAVISGILIC
YLMYKEIIRA

Sequences:

>Translated_250_residues
MIIKVMVMLLIELTYAFIFVIIAVLIAYREKLGIEKKILYVSILALIQLFILGFVLLYIFSFGMVGAFLMIGVMITLASY
LIMREINLKNKTKLFICLFITFLTTTIVSLAVLTIPKVVKFEPIYVIPLMGMVIGNTMNTIHLALDKIIDMVKSERDILW
GYLALGATEIEALRPFIKNAVKSAVIPQMNRTKSVGVIFIPGAMVGMLLSGANPIYAAEIQIIIMWMILSSAVISGILIC
YLMYKEIIRA
>Mature_250_residues
MIIKVMVMLLIELTYAFIFVIIAVLIAYREKLGIEKKILYVSILALIQLFILGFVLLYIFSFGMVGAFLMIGVMITLASY
LIMREINLKNKTKLFICLFITFLTTTIVSLAVLTIPKVVKFEPIYVIPLMGMVIGNTMNTIHLALDKIIDMVKSERDILW
GYLALGATEIEALRPFIKNAVKSAVIPQMNRTKSVGVIFIPGAMVGMLLSGANPIYAAEIQIIIMWMILSSAVISGILIC
YLMYKEIIRA

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family

Homologues:

Organism=Escherichia coli, GI87081746, Length=235, Percent_Identity=35.3191489361702, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y938_METJA (Q58348)

Other databases:

- EMBL:   L77117
- PIR:   B64417
- RefSeq:   NP_247933.1
- ProteinModelPortal:   Q58348
- GeneID:   1451834
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0938
- NMPDR:   fig|243232.1.peg.970
- TIGR:   MJ0938
- HOGENOM:   HBG539152
- OMA:   AMNSASL
- ProtClustDB:   CLSK876397
- BioCyc:   MJAN243232:MJ_0938-MONOMER
- InterPro:   IPR005226
- TIGRFAMs:   TIGR00245

Pfam domain/function: PF03649 UPF0014

EC number: NA

Molecular weight: Translated: 27984; Mature: 27984

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdaf8fd0)-; HASH(0xdcb9358)-; HASH(0xd6affd8)-; HASH(0xda58fc4)-; HASH(0xd6a42fc)-; HASH(0xd5efa3c)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKVMVMLLIELTYAFIFVIIAVLIAYREKLGIEKKILYVSILALIQLFILGFVLLYIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SFGMVGAFLMIGVMITLASYLIMREINLKNKTKLFICLFITFLTTTIVSLAVLTIPKVVK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEPIYVIPLMGMVIGNTMNTIHLALDKIIDMVKSERDILWGYLALGATEIEALRPFIKNA
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKSAVIPQMNRTKSVGVIFIPGAMVGMLLSGANPIYAAEIQIIIMWMILSSAVISGILIC
HHHHHCCCCCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YLMYKEIIRA
HHHHHHHHCH
>Mature Secondary Structure
MIIKVMVMLLIELTYAFIFVIIAVLIAYREKLGIEKKILYVSILALIQLFILGFVLLYIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SFGMVGAFLMIGVMITLASYLIMREINLKNKTKLFICLFITFLTTTIVSLAVLTIPKVVK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEPIYVIPLMGMVIGNTMNTIHLALDKIIDMVKSERDILWGYLALGATEIEALRPFIKNA
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKSAVIPQMNRTKSVGVIFIPGAMVGMLLSGANPIYAAEIQIIIMWMILSSAVISGILIC
HHHHHCCCCCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YLMYKEIIRA
HHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087