Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669133

Identifier: 15669133

GI number: 15669133

Start: 873866

End: 875119

Strand: Reverse

Name: 15669133

Synonym: MJ0943

Alternate gene names: NA

Gene position: 875119-873866 (Counterclockwise)

Preceding gene: 15669135

Following gene: 15669128

Centisome position: 52.56

GC content: 30.3

Gene sequence:

>1254_bases
GTGATAACAATGGACACGATAAGAAAAGCTTTAGTTTGTTTTAGCATACTCTCTATTTTGGTTTTAGCTTGTGGGTGTGT
GAATACTCCAGAAAAGATAGATATAAATATTAATTCAAATACGAATAATGGAGAAAATACTGAAAAACCTATAAATCAAG
AAAATCAAAATGTTAATAATGTAGAAAATAAAAAAGAAAGTCAATCAACACAGAATATTCAAAGTTATGAAAATAAAGAA
ATTAAAAATCAAGAAAATCATCCTTTACAAAGTAATCAAAATTATGAACAGACCAATGGTAATTTTAATGAAGAGAATGA
AAATGCCATGACTAATGTTGGAGAGTCAGAAGTAAATTATAATAATGAACCAGCATATAATTATTATATCGAAATAACTT
ATCCAGATGGCACTATTCCTGATAAAATAGAAGAACAAATGTTGTATTATATTAAAGTCATTGACCCAATAGTTGGAGGG
TTAGCAGGAATTGACATATATGTTGATGGCAACTACATTGGAACATTAGATGATGTATACGGGATTGTAGAGTGTGTATT
CTATGAGCCAGGTTATCACACAATAACAGCAGAAGATAATGGAAAAATTTTAGCATCTAAAACTGTATATGTTGAGGAAG
GGACTGCATACAACAGTGGAGAATCCGAAAATTATGATGAGTATGATAATAATTATGAAAGCAATGACTTACAACAAACA
CAAACTCAGTTTTCAGAAATAGAAGTATATGTGGATGATATAAAACCCAGTAATAGTATTATAATTACAAAATTAGCTAT
GAATCCAGGTTTTTTAGCATCAATAAATGGAATCTCTCCAGACATTGGTGTAAATATAGAAATGGAAAATGGAGAAAAAA
TAAATTTAAAATATGTTTCTATGGATGTAGATTTAATAATAGATAATCCAAATTCAGAGAGTATAACAATCGATAAAATA
ATCTTAAATATGTTTGATGATGAAGGTCATAGTTTAGGACGAGGAGAGGTATCAAATATAGTAATAACACCAGGAGAAAA
TCCAGTAACTGTTAAAGTAAATATACCGATTAATAAGATGGGATATGAAATCCTTAGAAAATTAAGTGGAGAAGAAGTTT
TTGCTGAAATATCTGGAAGTGCATATATTGAAGGCAGTGGGGAAGTCCCATTTAGTGGAGAGGCGGATTTATTGCCACCA
TTACCTACACCACCATTCCCACTACCTCCATTGCCACCATTTCCAACTGAATAA

Upstream 100 bases:

>100_bases
ATTTCACAAAAAAGAGAAAAGTTTATATTTGTGTATAGTTATATCTATGTTAGTAAATATGCTAAATTTAACAAAAATGT
TAAAAGTGGAATTTAATTAG

Downstream 100 bases:

>100_bases
CAAAATTTTAAATCTTTTACATTTTTATATCTCCAAATTTACCAATAACCGAAAAGTATATATACTACTTATTATTATTT
AATTTTTGCTTCTGGTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MITMDTIRKALVCFSILSILVLACGCVNTPEKIDININSNTNNGENTEKPINQENQNVNNVENKKESQSTQNIQSYENKE
IKNQENHPLQSNQNYEQTNGNFNEENENAMTNVGESEVNYNNEPAYNYYIEITYPDGTIPDKIEEQMLYYIKVIDPIVGG
LAGIDIYVDGNYIGTLDDVYGIVECVFYEPGYHTITAEDNGKILASKTVYVEEGTAYNSGESENYDEYDNNYESNDLQQT
QTQFSEIEVYVDDIKPSNSIIITKLAMNPGFLASINGISPDIGVNIEMENGEKINLKYVSMDVDLIIDNPNSESITIDKI
ILNMFDDEGHSLGRGEVSNIVITPGENPVTVKVNIPINKMGYEILRKLSGEEVFAEISGSAYIEGSGEVPFSGEADLLPP
LPTPPFPLPPLPPFPTE

Sequences:

>Translated_417_residues
MITMDTIRKALVCFSILSILVLACGCVNTPEKIDININSNTNNGENTEKPINQENQNVNNVENKKESQSTQNIQSYENKE
IKNQENHPLQSNQNYEQTNGNFNEENENAMTNVGESEVNYNNEPAYNYYIEITYPDGTIPDKIEEQMLYYIKVIDPIVGG
LAGIDIYVDGNYIGTLDDVYGIVECVFYEPGYHTITAEDNGKILASKTVYVEEGTAYNSGESENYDEYDNNYESNDLQQT
QTQFSEIEVYVDDIKPSNSIIITKLAMNPGFLASINGISPDIGVNIEMENGEKINLKYVSMDVDLIIDNPNSESITIDKI
ILNMFDDEGHSLGRGEVSNIVITPGENPVTVKVNIPINKMGYEILRKLSGEEVFAEISGSAYIEGSGEVPFSGEADLLPP
LPTPPFPLPPLPPFPTE
>Mature_417_residues
MITMDTIRKALVCFSILSILVLACGCVNTPEKIDININSNTNNGENTEKPINQENQNVNNVENKKESQSTQNIQSYENKE
IKNQENHPLQSNQNYEQTNGNFNEENENAMTNVGESEVNYNNEPAYNYYIEITYPDGTIPDKIEEQMLYYIKVIDPIVGG
LAGIDIYVDGNYIGTLDDVYGIVECVFYEPGYHTITAEDNGKILASKTVYVEEGTAYNSGESENYDEYDNNYESNDLQQT
QTQFSEIEVYVDDIKPSNSIIITKLAMNPGFLASINGISPDIGVNIEMENGEKINLKYVSMDVDLIIDNPNSESITIDKI
ILNMFDDEGHSLGRGEVSNIVITPGENPVTVKVNIPINKMGYEILRKLSGEEVFAEISGSAYIEGSGEVPFSGEADLLPP
LPTPPFPLPPLPPFPTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y943_METJA (Q58353)

Other databases:

- EMBL:   L77117
- PIR:   G64417
- RefSeq:   NP_247938.1
- ProteinModelPortal:   Q58353
- GeneID:   1451840
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0943
- NMPDR:   fig|243232.1.peg.975
- TIGR:   MJ0943
- ProtClustDB:   CLSK2749935
- BioCyc:   MJAN243232:MJ_0943-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46356; Mature: 46356

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xafa0dc4)-; HASH(0xd5f7b18)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITMDTIRKALVCFSILSILVLACGCVNTPEKIDININSNTNNGENTEKPINQENQNVNN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH
VENKKESQSTQNIQSYENKEIKNQENHPLQSNQNYEQTNGNFNEENENAMTNVGESEVNY
HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCCC
NNEPAYNYYIEITYPDGTIPDKIEEQMLYYIKVIDPIVGGLAGIDIYVDGNYIGTLDDVY
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECHHHHH
GIVECVFYEPGYHTITAEDNGKILASKTVYVEEGTAYNSGESENYDEYDNNYESNDLQQT
HEEEEEEECCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCHHHHH
QTQFSEIEVYVDDIKPSNSIIITKLAMNPGFLASINGISPDIGVNIEMENGEKINLKYVS
HHHHHEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCEEEEEEEE
MDVDLIIDNPNSESITIDKIILNMFDDEGHSLGRGEVSNIVITPGENPVTVKVNIPINKM
EEEEEEEECCCCCCEEHHEEEEEHHCCCCCCCCCCCCCEEEEECCCCEEEEEEECCHHHH
GYEILRKLSGEEVFAEISGSAYIEGSGEVPFSGEADLLPPLPTPPFPLPPLPPFPTE
HHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MITMDTIRKALVCFSILSILVLACGCVNTPEKIDININSNTNNGENTEKPINQENQNVNN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH
VENKKESQSTQNIQSYENKEIKNQENHPLQSNQNYEQTNGNFNEENENAMTNVGESEVNY
HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCCC
NNEPAYNYYIEITYPDGTIPDKIEEQMLYYIKVIDPIVGGLAGIDIYVDGNYIGTLDDVY
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECHHHHH
GIVECVFYEPGYHTITAEDNGKILASKTVYVEEGTAYNSGESENYDEYDNNYESNDLQQT
HEEEEEEECCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCHHHHH
QTQFSEIEVYVDDIKPSNSIIITKLAMNPGFLASINGISPDIGVNIEMENGEKINLKYVS
HHHHHEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCEEEEEEEE
MDVDLIIDNPNSESITIDKIILNMFDDEGHSLGRGEVSNIVITPGENPVTVKVNIPINKM
EEEEEEEECCCCCCEEHHEEEEEHHCCCCCCCCCCCCCEEEEECCCCEEEEEEECCHHHH
GYEILRKLSGEEVFAEISGSAYIEGSGEVPFSGEADLLPPLPTPPFPLPPLPPFPTE
HHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087