Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669125

Identifier: 15669125

GI number: 15669125

Start: 864823

End: 865449

Strand: Direct

Name: 15669125

Synonym: MJ0935

Alternate gene names: NA

Gene position: 864823-865449 (Clockwise)

Preceding gene: 15669124

Following gene: 15669126

Centisome position: 51.94

GC content: 25.04

Gene sequence:

>627_bases
ATGAGCATAGAGAAAGCTAAAGAAGATTTTAAATATTTGATAAATAGGGGCTATAAAAAGGATGTTGCTTTAAATTTTGT
AGCAAATCATTATAAGTTAAGTAAAGAGGATAGGCTTAAAATTATTAGAACTACTCACAGCGATAAAGAAATTAAATTAA
CTAAAAGAAAGCTTAAAAAATTAAAAGATTTTAAAGGAAAAACCATATACATAGATGGTTTTAATGTTCTTATTAGTTTA
GAAGCTTTAATTAAAGGAAATAAAATTGTTTTATGTGATGACAATATTTACAGAGATTTTGAAAACGTTTATGGTAAATA
CAAGATAAATGAATACAGTGACAAAGCCATATCTCTTTTATTGGAGATTCTTAAGCATTACAATATTAAAGCTGTTATTT
ATTTAGATGCACAAGTATCAAAAAGTGGAATATTGGCTAAAAAGATTAGAGAAAAAATGAAAGCTTTTAGTATTGAAGGA
GAGGTTTTTTGTGTTAAAAATTGTGACTACGAGCTTAAAAATAAAGAAGTTGTTGCAACATCAGACAGTGTAATAATTAA
AAGTGAAAATGTAAAGTATGTGGTTGATTTAATAGCTGAAGCAATTGAATATTTAAAAAAGAAATAA

Upstream 100 bases:

>100_bases
ACACCCGATGAATACATAAACTCCTTAATTGTTAAAGTAGATATAGACAGCTGTATATTTTGTAGGGAATGTGAAGAAAT
CTGTCCCATAAGGGGAAATT

Downstream 100 bases:

>100_bases
TATTTCTCTCATTAAAAAATTGTTATATAAGAGATAATGACATAGATAGTGTTATAAAATATTCTCCATTATAAAATATC
TTCGAGGCGATAGAATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSIEKAKEDFKYLINRGYKKDVALNFVANHYKLSKEDRLKIIRTTHSDKEIKLTKRKLKKLKDFKGKTIYIDGFNVLISL
EALIKGNKIVLCDDNIYRDFENVYGKYKINEYSDKAISLLLEILKHYNIKAVIYLDAQVSKSGILAKKIREKMKAFSIEG
EVFCVKNCDYELKNKEVVATSDSVIIKSENVKYVVDLIAEAIEYLKKK

Sequences:

>Translated_208_residues
MSIEKAKEDFKYLINRGYKKDVALNFVANHYKLSKEDRLKIIRTTHSDKEIKLTKRKLKKLKDFKGKTIYIDGFNVLISL
EALIKGNKIVLCDDNIYRDFENVYGKYKINEYSDKAISLLLEILKHYNIKAVIYLDAQVSKSGILAKKIREKMKAFSIEG
EVFCVKNCDYELKNKEVVATSDSVIIKSENVKYVVDLIAEAIEYLKKK
>Mature_207_residues
SIEKAKEDFKYLINRGYKKDVALNFVANHYKLSKEDRLKIIRTTHSDKEIKLTKRKLKKLKDFKGKTIYIDGFNVLISLE
ALIKGNKIVLCDDNIYRDFENVYGKYKINEYSDKAISLLLEILKHYNIKAVIYLDAQVSKSGILAKKIREKMKAFSIEGE
VFCVKNCDYELKNKEVVATSDSVIIKSENVKYVVDLIAEAIEYLKKK

Specific function: Unknown

COG id: COG2454

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y935_METJA (Q58345)

Other databases:

- EMBL:   L77117
- PIR:   G64416
- RefSeq:   NP_247930.1
- ProteinModelPortal:   Q58345
- GeneID:   1451831
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0935
- NMPDR:   fig|243232.1.peg.967
- TIGR:   MJ0935
- HOGENOM:   HBG555072
- OMA:   ATSDFHI
- ProtClustDB:   CLSK2517671
- BioCyc:   MJAN243232:MJ_0935-MONOMER
- InterPro:   IPR007368
- ProDom:   PD019177

Pfam domain/function: PF04256 DUF434

EC number: NA

Molecular weight: Translated: 24163; Mature: 24031

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEKAKEDFKYLINRGYKKDVALNFVANHYKLSKEDRLKIIRTTHSDKEIKLTKRKLKK
CCCHHHHHHHHHHHHCCCCCHHHHEEHHHHEECCCCCCEEEEEECCCCCHHHHHHHHHHH
LKDFKGKTIYIDGFNVLISLEALIKGNKIVLCDDNIYRDFENVYGKYKINEYSDKAISLL
HHHCCCCEEEEECCEEEEEEEHHHCCCEEEEECCHHHHHHHHHCCEEEECCHHHHHHHHH
LEILKHYNIKAVIYLDAQVSKSGILAKKIREKMKAFSIEGEVFCVKNCDYELKNKEVVAT
HHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEE
SDSVIIKSENVKYVVDLIAEAIEYLKKK
CCCEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIEKAKEDFKYLINRGYKKDVALNFVANHYKLSKEDRLKIIRTTHSDKEIKLTKRKLKK
CCHHHHHHHHHHHHCCCCCHHHHEEHHHHEECCCCCCEEEEEECCCCCHHHHHHHHHHH
LKDFKGKTIYIDGFNVLISLEALIKGNKIVLCDDNIYRDFENVYGKYKINEYSDKAISLL
HHHCCCCEEEEECCEEEEEEEHHHCCCEEEEECCHHHHHHHHHCCEEEECCHHHHHHHHH
LEILKHYNIKAVIYLDAQVSKSGILAKKIREKMKAFSIEGEVFCVKNCDYELKNKEVVAT
HHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEE
SDSVIIKSENVKYVVDLIAEAIEYLKKK
CCCEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087