Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669124

Identifier: 15669124

GI number: 15669124

Start: 864213

End: 864842

Strand: Direct

Name: 15669124

Synonym: MJ0934

Alternate gene names: NA

Gene position: 864213-864842 (Clockwise)

Preceding gene: 15669123

Following gene: 15669125

Centisome position: 51.91

GC content: 31.59

Gene sequence:

>630_bases
GTGAGGTTTATGGAAGAAGAATTTTACAAAATTTTTAAAGGGGCAGGATTGATAAAAACCTTAATAAGAAGCATTTTTTT
AACAAATAGGAATAAGTTTTCAAAACCTTCAAAAACTAAGCCTATACAATTAACTGAGTGCATTGGTTGTGGTTTATGTG
TAGATGTATGCCCTACAAATGCAATAAAAATATTTAGCTTTAGAGAAACCATATGCTCTGTTTGTGGAACTTGTGTTGAT
GTATGCCCAAACAACGCAATAATAAAAGATAGATTTACCATAGATGCTGATAAATGCACAAAATGTGGAGTTTGTGTTTT
ATTTTGTCCAATACCTATAATAAAAAAAGAAATTCCTAAGCCAAAAACACCCGTTATTTTAAAAGATAGATGTAACAGTT
GTGGGTTGTGTGAATGTGAAGCTATCGATATAATAAATAAAGAAATTAACCCGGAGAAATGCAAGCTCTGCCTAAGTTGT
ATTGAAAAATGTCCATTACAAGCTATTTTGACACCCGATGAATACATAAACTCCTTAATTGTTAAAGTAGATATAGACAG
CTGTATATTTTGTAGGGAATGTGAAGAAATCTGTCCCATAAGGGGAAATTATGAGCATAGAGAAAGCTAA

Upstream 100 bases:

>100_bases
CTCGGGTTCAAATCCCGGCCAGGGCGCCATTTGCCGGGCTTCTTTTTATTTTAGAACAATTAATCGATAAATTTAAATAT
TTTTAAAATATCTTAAGTAA

Downstream 100 bases:

>100_bases
AGAAGATTTTAAATATTTGATAAATAGGGGCTATAAAAAGGATGTTGCTTTAAATTTTGTAGCAAATCATTATAAGTTAA
GTAAAGAGGATAGGCTTAAA

Product: polyferredoxin MvhB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRFMEEEFYKIFKGAGLIKTLIRSIFLTNRNKFSKPSKTKPIQLTECIGCGLCVDVCPTNAIKIFSFRETICSVCGTCVD
VCPNNAIIKDRFTIDADKCTKCGVCVLFCPIPIIKKEIPKPKTPVILKDRCNSCGLCECEAIDIINKEINPEKCKLCLSC
IEKCPLQAILTPDEYINSLIVKVDIDSCIFCRECEEICPIRGNYEHRES

Sequences:

>Translated_209_residues
MRFMEEEFYKIFKGAGLIKTLIRSIFLTNRNKFSKPSKTKPIQLTECIGCGLCVDVCPTNAIKIFSFRETICSVCGTCVD
VCPNNAIIKDRFTIDADKCTKCGVCVLFCPIPIIKKEIPKPKTPVILKDRCNSCGLCECEAIDIINKEINPEKCKLCLSC
IEKCPLQAILTPDEYINSLIVKVDIDSCIFCRECEEICPIRGNYEHRES
>Mature_209_residues
MRFMEEEFYKIFKGAGLIKTLIRSIFLTNRNKFSKPSKTKPIQLTECIGCGLCVDVCPTNAIKIFSFRETICSVCGTCVD
VCPNNAIIKDRFTIDADKCTKCGVCVLFCPIPIIKKEIPKPKTPVILKDRCNSCGLCECEAIDIINKEINPEKCKLCLSC
IEKCPLQAILTPDEYINSLIVKVDIDSCIFCRECEEICPIRGNYEHRES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 4Fe-4S ferredoxin-type domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y934_METJA (Q58344)

Other databases:

- EMBL:   L77117
- PIR:   F64416
- RefSeq:   NP_247929.1
- ProteinModelPortal:   Q58344
- SMR:   Q58344
- GeneID:   1451830
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0934
- NMPDR:   fig|243232.1.peg.966
- TIGR:   MJ0934
- HOGENOM:   HBG539151
- OMA:   FCKDCEE
- ProtClustDB:   CLSK876394
- BioCyc:   MJAN243232:MJ_0934-MONOMER
- GO:   GO:0006810
- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014406
- PANTHER:   PTHR11995

Pfam domain/function: PF00037 Fer4

EC number: NA

Molecular weight: Translated: 23567; Mature: 23567

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
12.4 %Cys+Met (Translated Protein)
11.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
12.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFMEEEFYKIFKGAGLIKTLIRSIFLTNRNKFSKPSKTKPIQLTECIGCGLCVDVCPTN
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHCCCCEEECCCCC
AIKIFSFRETICSVCGTCVDVCPNNAIIKDRFTIDADKCTKCGVCVLFCPIPIIKKEIPK
CEEEHHHHHHHHHHHHHHHHHCCCCCEEECEEEECHHHCCCCCEEEEECCCHHHHHHCCC
PKTPVILKDRCNSCGLCECEAIDIINKEINPEKCKLCLSCIEKCPLQAILTPDEYINSLI
CCCCEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHEE
VKVDIDSCIFCRECEEICPIRGNYEHRES
EEECCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRFMEEEFYKIFKGAGLIKTLIRSIFLTNRNKFSKPSKTKPIQLTECIGCGLCVDVCPTN
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHCCCCEEECCCCC
AIKIFSFRETICSVCGTCVDVCPNNAIIKDRFTIDADKCTKCGVCVLFCPIPIIKKEIPK
CEEEHHHHHHHHHHHHHHHHHCCCCCEEECEEEECHHHCCCCCEEEEECCCHHHHHHCCC
PKTPVILKDRCNSCGLCECEAIDIINKEINPEKCKLCLSCIEKCPLQAILTPDEYINSLI
CCCCEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHEE
VKVDIDSCIFCRECEEICPIRGNYEHRES
EEECCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087