| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669124
Identifier: 15669124
GI number: 15669124
Start: 864213
End: 864842
Strand: Direct
Name: 15669124
Synonym: MJ0934
Alternate gene names: NA
Gene position: 864213-864842 (Clockwise)
Preceding gene: 15669123
Following gene: 15669125
Centisome position: 51.91
GC content: 31.59
Gene sequence:
>630_bases GTGAGGTTTATGGAAGAAGAATTTTACAAAATTTTTAAAGGGGCAGGATTGATAAAAACCTTAATAAGAAGCATTTTTTT AACAAATAGGAATAAGTTTTCAAAACCTTCAAAAACTAAGCCTATACAATTAACTGAGTGCATTGGTTGTGGTTTATGTG TAGATGTATGCCCTACAAATGCAATAAAAATATTTAGCTTTAGAGAAACCATATGCTCTGTTTGTGGAACTTGTGTTGAT GTATGCCCAAACAACGCAATAATAAAAGATAGATTTACCATAGATGCTGATAAATGCACAAAATGTGGAGTTTGTGTTTT ATTTTGTCCAATACCTATAATAAAAAAAGAAATTCCTAAGCCAAAAACACCCGTTATTTTAAAAGATAGATGTAACAGTT GTGGGTTGTGTGAATGTGAAGCTATCGATATAATAAATAAAGAAATTAACCCGGAGAAATGCAAGCTCTGCCTAAGTTGT ATTGAAAAATGTCCATTACAAGCTATTTTGACACCCGATGAATACATAAACTCCTTAATTGTTAAAGTAGATATAGACAG CTGTATATTTTGTAGGGAATGTGAAGAAATCTGTCCCATAAGGGGAAATTATGAGCATAGAGAAAGCTAA
Upstream 100 bases:
>100_bases CTCGGGTTCAAATCCCGGCCAGGGCGCCATTTGCCGGGCTTCTTTTTATTTTAGAACAATTAATCGATAAATTTAAATAT TTTTAAAATATCTTAAGTAA
Downstream 100 bases:
>100_bases AGAAGATTTTAAATATTTGATAAATAGGGGCTATAAAAAGGATGTTGCTTTAAATTTTGTAGCAAATCATTATAAGTTAA GTAAAGAGGATAGGCTTAAA
Product: polyferredoxin MvhB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MRFMEEEFYKIFKGAGLIKTLIRSIFLTNRNKFSKPSKTKPIQLTECIGCGLCVDVCPTNAIKIFSFRETICSVCGTCVD VCPNNAIIKDRFTIDADKCTKCGVCVLFCPIPIIKKEIPKPKTPVILKDRCNSCGLCECEAIDIINKEINPEKCKLCLSC IEKCPLQAILTPDEYINSLIVKVDIDSCIFCRECEEICPIRGNYEHRES
Sequences:
>Translated_209_residues MRFMEEEFYKIFKGAGLIKTLIRSIFLTNRNKFSKPSKTKPIQLTECIGCGLCVDVCPTNAIKIFSFRETICSVCGTCVD VCPNNAIIKDRFTIDADKCTKCGVCVLFCPIPIIKKEIPKPKTPVILKDRCNSCGLCECEAIDIINKEINPEKCKLCLSC IEKCPLQAILTPDEYINSLIVKVDIDSCIFCRECEEICPIRGNYEHRES >Mature_209_residues MRFMEEEFYKIFKGAGLIKTLIRSIFLTNRNKFSKPSKTKPIQLTECIGCGLCVDVCPTNAIKIFSFRETICSVCGTCVD VCPNNAIIKDRFTIDADKCTKCGVCVLFCPIPIIKKEIPKPKTPVILKDRCNSCGLCECEAIDIINKEINPEKCKLCLSC IEKCPLQAILTPDEYINSLIVKVDIDSCIFCRECEEICPIRGNYEHRES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 6 4Fe-4S ferredoxin-type domains
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y934_METJA (Q58344)
Other databases:
- EMBL: L77117 - PIR: F64416 - RefSeq: NP_247929.1 - ProteinModelPortal: Q58344 - SMR: Q58344 - GeneID: 1451830 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0934 - NMPDR: fig|243232.1.peg.966 - TIGR: MJ0934 - HOGENOM: HBG539151 - OMA: FCKDCEE - ProtClustDB: CLSK876394 - BioCyc: MJAN243232:MJ_0934-MONOMER - GO: GO:0006810 - InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014406 - PANTHER: PTHR11995
Pfam domain/function: PF00037 Fer4
EC number: NA
Molecular weight: Translated: 23567; Mature: 23567
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 12.4 %Cys+Met (Translated Protein) 11.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 12.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFMEEEFYKIFKGAGLIKTLIRSIFLTNRNKFSKPSKTKPIQLTECIGCGLCVDVCPTN CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHCCCCEEECCCCC AIKIFSFRETICSVCGTCVDVCPNNAIIKDRFTIDADKCTKCGVCVLFCPIPIIKKEIPK CEEEHHHHHHHHHHHHHHHHHCCCCCEEECEEEECHHHCCCCCEEEEECCCHHHHHHCCC PKTPVILKDRCNSCGLCECEAIDIINKEINPEKCKLCLSCIEKCPLQAILTPDEYINSLI CCCCEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHEE VKVDIDSCIFCRECEEICPIRGNYEHRES EEECCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRFMEEEFYKIFKGAGLIKTLIRSIFLTNRNKFSKPSKTKPIQLTECIGCGLCVDVCPTN CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHCCCCEEECCCCC AIKIFSFRETICSVCGTCVDVCPNNAIIKDRFTIDADKCTKCGVCVLFCPIPIIKKEIPK CEEEHHHHHHHHHHHHHHHHHCCCCCEEECEEEECHHHCCCCCEEEEECCCHHHHHHCCC PKTPVILKDRCNSCGLCECEAIDIINKEINPEKCKLCLSCIEKCPLQAILTPDEYINSLI CCCCEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHEE VKVDIDSCIFCRECEEICPIRGNYEHRES EEECCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087