| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669125
Identifier: 15669125
GI number: 15669125
Start: 864823
End: 865449
Strand: Direct
Name: 15669125
Synonym: MJ0935
Alternate gene names: NA
Gene position: 864823-865449 (Clockwise)
Preceding gene: 15669124
Following gene: 15669126
Centisome position: 51.94
GC content: 25.04
Gene sequence:
>627_bases ATGAGCATAGAGAAAGCTAAAGAAGATTTTAAATATTTGATAAATAGGGGCTATAAAAAGGATGTTGCTTTAAATTTTGT AGCAAATCATTATAAGTTAAGTAAAGAGGATAGGCTTAAAATTATTAGAACTACTCACAGCGATAAAGAAATTAAATTAA CTAAAAGAAAGCTTAAAAAATTAAAAGATTTTAAAGGAAAAACCATATACATAGATGGTTTTAATGTTCTTATTAGTTTA GAAGCTTTAATTAAAGGAAATAAAATTGTTTTATGTGATGACAATATTTACAGAGATTTTGAAAACGTTTATGGTAAATA CAAGATAAATGAATACAGTGACAAAGCCATATCTCTTTTATTGGAGATTCTTAAGCATTACAATATTAAAGCTGTTATTT ATTTAGATGCACAAGTATCAAAAAGTGGAATATTGGCTAAAAAGATTAGAGAAAAAATGAAAGCTTTTAGTATTGAAGGA GAGGTTTTTTGTGTTAAAAATTGTGACTACGAGCTTAAAAATAAAGAAGTTGTTGCAACATCAGACAGTGTAATAATTAA AAGTGAAAATGTAAAGTATGTGGTTGATTTAATAGCTGAAGCAATTGAATATTTAAAAAAGAAATAA
Upstream 100 bases:
>100_bases ACACCCGATGAATACATAAACTCCTTAATTGTTAAAGTAGATATAGACAGCTGTATATTTTGTAGGGAATGTGAAGAAAT CTGTCCCATAAGGGGAAATT
Downstream 100 bases:
>100_bases TATTTCTCTCATTAAAAAATTGTTATATAAGAGATAATGACATAGATAGTGTTATAAAATATTCTCCATTATAAAATATC TTCGAGGCGATAGAATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSIEKAKEDFKYLINRGYKKDVALNFVANHYKLSKEDRLKIIRTTHSDKEIKLTKRKLKKLKDFKGKTIYIDGFNVLISL EALIKGNKIVLCDDNIYRDFENVYGKYKINEYSDKAISLLLEILKHYNIKAVIYLDAQVSKSGILAKKIREKMKAFSIEG EVFCVKNCDYELKNKEVVATSDSVIIKSENVKYVVDLIAEAIEYLKKK
Sequences:
>Translated_208_residues MSIEKAKEDFKYLINRGYKKDVALNFVANHYKLSKEDRLKIIRTTHSDKEIKLTKRKLKKLKDFKGKTIYIDGFNVLISL EALIKGNKIVLCDDNIYRDFENVYGKYKINEYSDKAISLLLEILKHYNIKAVIYLDAQVSKSGILAKKIREKMKAFSIEG EVFCVKNCDYELKNKEVVATSDSVIIKSENVKYVVDLIAEAIEYLKKK >Mature_207_residues SIEKAKEDFKYLINRGYKKDVALNFVANHYKLSKEDRLKIIRTTHSDKEIKLTKRKLKKLKDFKGKTIYIDGFNVLISLE ALIKGNKIVLCDDNIYRDFENVYGKYKINEYSDKAISLLLEILKHYNIKAVIYLDAQVSKSGILAKKIREKMKAFSIEGE VFCVKNCDYELKNKEVVATSDSVIIKSENVKYVVDLIAEAIEYLKKK
Specific function: Unknown
COG id: COG2454
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y935_METJA (Q58345)
Other databases:
- EMBL: L77117 - PIR: G64416 - RefSeq: NP_247930.1 - ProteinModelPortal: Q58345 - GeneID: 1451831 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0935 - NMPDR: fig|243232.1.peg.967 - TIGR: MJ0935 - HOGENOM: HBG555072 - OMA: ATSDFHI - ProtClustDB: CLSK2517671 - BioCyc: MJAN243232:MJ_0935-MONOMER - InterPro: IPR007368 - ProDom: PD019177
Pfam domain/function: PF04256 DUF434
EC number: NA
Molecular weight: Translated: 24163; Mature: 24031
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEKAKEDFKYLINRGYKKDVALNFVANHYKLSKEDRLKIIRTTHSDKEIKLTKRKLKK CCCHHHHHHHHHHHHCCCCCHHHHEEHHHHEECCCCCCEEEEEECCCCCHHHHHHHHHHH LKDFKGKTIYIDGFNVLISLEALIKGNKIVLCDDNIYRDFENVYGKYKINEYSDKAISLL HHHCCCCEEEEECCEEEEEEEHHHCCCEEEEECCHHHHHHHHHCCEEEECCHHHHHHHHH LEILKHYNIKAVIYLDAQVSKSGILAKKIREKMKAFSIEGEVFCVKNCDYELKNKEVVAT HHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEE SDSVIIKSENVKYVVDLIAEAIEYLKKK CCCEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIEKAKEDFKYLINRGYKKDVALNFVANHYKLSKEDRLKIIRTTHSDKEIKLTKRKLKK CCHHHHHHHHHHHHCCCCCHHHHEEHHHHEECCCCCCEEEEEECCCCCHHHHHHHHHHH LKDFKGKTIYIDGFNVLISLEALIKGNKIVLCDDNIYRDFENVYGKYKINEYSDKAISLL HHHCCCCEEEEECCEEEEEEEHHHCCCEEEEECCHHHHHHHHHCCEEEECCHHHHHHHHH LEILKHYNIKAVIYLDAQVSKSGILAKKIREKMKAFSIEGEVFCVKNCDYELKNKEVVAT HHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEE SDSVIIKSENVKYVVDLIAEAIEYLKKK CCCEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087