Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669113

Identifier: 15669113

GI number: 15669113

Start: 853367

End: 854260

Strand: Direct

Name: 15669113

Synonym: MJ0923

Alternate gene names: NA

Gene position: 853367-854260 (Clockwise)

Preceding gene: 15669107

Following gene: 15669116

Centisome position: 51.25

GC content: 26.96

Gene sequence:

>894_bases
ATGGAAATATTTAAACTCTTAAGAAAAGATAGAAAGATGTTATTTCTAATGTTTATTGGAACAGTTTCTTTTTTATTTAT
ATTTATCCCATTTCTTAAATTTCAGATGATAGGTTCAAGTCATAAAATTAATGCATATCCAAGTTTATCAGCTGTATGTG
GTCTTTTATTGGGTCCAATTTATGGATTTTTTGCAGTTATGTTGGTAACATTAATATACTTTTTTTTAAATCCAAAAGCA
TTTTATTTTGGAATTTATTCTTTAATACCTCCTACATTAGCGGTTATATCTGCTGGAGCGTTATCTGAAGGGAAATGGAA
ATATTCAGCTATAATTTTAATTGTGGGTTTATTACTATTTTATTTAACAGATGTGGGGAGGGTAGCTTTTTATTACCCAT
ACCTTTCAACTCTTGCTTTATTACTTATCCTCATTTTTAGAGAAAAAATAAGTAAATTGTTGTTTAGTAAAGATTGGAAA
AAAATGATAGTTGGGGCTACAATTTTATCATTCTCATCGGTGATGACAGACCATCTATATGGTTCAATTTTGGGAATTGT
ATATTTACATTTGCCAGCAGAGGATTACATTTCAGTAATTCCTCTCTTTATTAAAGAGAGATTAATAATGACTGTAATAG
GTGCATTTTTTGTAATTTTTGCAATAGAAATTAGCAAATGTTTCTTAAAAAATGCTACAAAATTAAAGGAAAAATTATTA
AAAAGTTATATTGATAAAGAAATAAAAATAAACTGCAAAAATATGTTGAATGTAGATGAAGAGTTATTAAAGAAATATAA
TGTTAAAATACCGTCGGAAGAAGAACAGAAAGAAATTTTAAAGACACTTGTGGAAGTAGTGGTGTTCAATAACGATAAAG
ATGAAAATCGATAA

Upstream 100 bases:

>100_bases
TAAATATTAAATAGTAACACATTTATATAGTCAGAAGGTAATAGAAAATATTTTATATTACATTTGGACTAAATAAGTCC
AATAGTGGCTATGTGATATT

Downstream 100 bases:

>100_bases
AGATGAAAATCAATGAAAAACACTATAAGTTCAAAAATTTATATATAGACTACGAAAGCCCTTATAATAATGTGCTTTCC
TTTATTTTCTCAATGACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MEIFKLLRKDRKMLFLMFIGTVSFLFIFIPFLKFQMIGSSHKINAYPSLSAVCGLLLGPIYGFFAVMLVTLIYFFLNPKA
FYFGIYSLIPPTLAVISAGALSEGKWKYSAIILIVGLLLFYLTDVGRVAFYYPYLSTLALLLILIFREKISKLLFSKDWK
KMIVGATILSFSSVMTDHLYGSILGIVYLHLPAEDYISVIPLFIKERLIMTVIGAFFVIFAIEISKCFLKNATKLKEKLL
KSYIDKEIKINCKNMLNVDEELLKKYNVKIPSEEEQKEILKTLVEVVVFNNDKDENR

Sequences:

>Translated_297_residues
MEIFKLLRKDRKMLFLMFIGTVSFLFIFIPFLKFQMIGSSHKINAYPSLSAVCGLLLGPIYGFFAVMLVTLIYFFLNPKA
FYFGIYSLIPPTLAVISAGALSEGKWKYSAIILIVGLLLFYLTDVGRVAFYYPYLSTLALLLILIFREKISKLLFSKDWK
KMIVGATILSFSSVMTDHLYGSILGIVYLHLPAEDYISVIPLFIKERLIMTVIGAFFVIFAIEISKCFLKNATKLKEKLL
KSYIDKEIKINCKNMLNVDEELLKKYNVKIPSEEEQKEILKTLVEVVVFNNDKDENR
>Mature_297_residues
MEIFKLLRKDRKMLFLMFIGTVSFLFIFIPFLKFQMIGSSHKINAYPSLSAVCGLLLGPIYGFFAVMLVTLIYFFLNPKA
FYFGIYSLIPPTLAVISAGALSEGKWKYSAIILIVGLLLFYLTDVGRVAFYYPYLSTLALLLILIFREKISKLLFSKDWK
KMIVGATILSFSSVMTDHLYGSILGIVYLHLPAEDYISVIPLFIKERLIMTVIGAFFVIFAIEISKCFLKNATKLKEKLL
KSYIDKEIKINCKNMLNVDEELLKKYNVKIPSEEEQKEILKTLVEVVVFNNDKDENR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y923_METJA (Q58333)

Other databases:

- EMBL:   L77117
- PIR:   C64415
- RefSeq:   NP_247918.1
- GeneID:   1451812
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0923
- NMPDR:   fig|243232.1.peg.955
- TIGR:   MJ0923
- OMA:   DHLYGSI
- ProtClustDB:   CLSK696661
- BioCyc:   MJAN243232:MJ_0923-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34084; Mature: 34084

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdbb3044)-; HASH(0xcacd740)-; HASH(0xd1cccb4)-; HASH(0xd97bf30)-; HASH(0xdbf2fb4)-; HASH(0xdb78a74)-; HASH(0xdb23a0c)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFKLLRKDRKMLFLMFIGTVSFLFIFIPFLKFQMIGSSHKINAYPSLSAVCGLLLGPI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
YGFFAVMLVTLIYFFLNPKAFYFGIYSLIPPTLAVISAGALSEGKWKYSAIILIVGLLLF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
YLTDVGRVAFYYPYLSTLALLLILIFREKISKLLFSKDWKKMIVGATILSFSSVMTDHLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSILGIVYLHLPAEDYISVIPLFIKERLIMTVIGAFFVIFAIEISKCFLKNATKLKEKLL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSYIDKEIKINCKNMLNVDEELLKKYNVKIPSEEEQKEILKTLVEVVVFNNDKDENR
HHHCCCHHEECHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure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HHHCCCHHEECHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087