| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669106
Identifier: 15669106
GI number: 15669106
Start: 847605
End: 847874
Strand: Reverse
Name: 15669106
Synonym: MJ0916
Alternate gene names: NA
Gene position: 847874-847605 (Counterclockwise)
Preceding gene: 15669108
Following gene: 15669105
Centisome position: 50.92
GC content: 32.59
Gene sequence:
>270_bases ATGGCAATTAGAGTTAGTGATATTTTAGATAAACCAATATACACAACGACAGCCATATACGTTGGGAAGGTCTATGATGT AATGCTTGATTTAAATAAGGGAGTTATTAGTGGTTTAATTGTTTCAGACATTCAAAATGGATGTTTAAAAGACTATGTTA CCGACCCTTCTAAGAAGGTTGTTTTGCCATTCAACTTAATAACTGCAATTGGAAATATAATATTGGTTAAACCTCCTGCA GATTCTGGTTATGGGTTCTTAAAGAAGTAA
Upstream 100 bases:
>100_bases ATTTTGAATCCTTCCATAATTACCACACAAAAGATTTAAATAAACATAAATAAATAGTAATTTTTTAAGTTAAAGGAGTA TAAAAATTAGGGGGATAGCA
Downstream 100 bases:
>100_bases TAAAAAAACAATAATATATTCTGTCTTTTATAATAAATTAGGCTTATTATTTATTTTTCTAAAAAATTTTATTTTATTGT TTTTAGGAGGGATAACTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MAIRVSDILDKPIYTTTAIYVGKVYDVMLDLNKGVISGLIVSDIQNGCLKDYVTDPSKKVVLPFNLITAIGNIILVKPPA DSGYGFLKK
Sequences:
>Translated_89_residues MAIRVSDILDKPIYTTTAIYVGKVYDVMLDLNKGVISGLIVSDIQNGCLKDYVTDPSKKVVLPFNLITAIGNIILVKPPA DSGYGFLKK >Mature_88_residues AIRVSDILDKPIYTTTAIYVGKVYDVMLDLNKGVISGLIVSDIQNGCLKDYVTDPSKKVVLPFNLITAIGNIILVKPPAD SGYGFLKK
Specific function: Unknown
COG id: COG1873
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y916_METJA (Q58326)
Other databases:
- EMBL: L77117 - PIR: D64414 - RefSeq: NP_247911.1 - ProteinModelPortal: Q58326 - SMR: Q58326 - GeneID: 1451805 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0916 - NMPDR: fig|243232.1.peg.948 - TIGR: MJ0916 - HOGENOM: HBG541240 - OMA: MAIRVSD - ProtClustDB: CLSK876385 - BioCyc: MJAN243232:MJ_0916-MONOMER - InterPro: IPR007903 - InterPro: IPR011033
Pfam domain/function: PF05239 PRC; SSF50346 PRCH_cytoplasmic
EC number: NA
Molecular weight: Translated: 9674; Mature: 9542
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRVSDILDKPIYTTTAIYVGKVYDVMLDLNKGVISGLIVSDIQNGCLKDYVTDPSKKV CEEECHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCCCCEE VLPFNLITAIGNIILVKPPADSGYGFLKK EEHHHHHHHHCCEEEEECCCCCCCCCCCC >Mature Secondary Structure AIRVSDILDKPIYTTTAIYVGKVYDVMLDLNKGVISGLIVSDIQNGCLKDYVTDPSKKV EEECHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCCCCEE VLPFNLITAIGNIILVKPPADSGYGFLKK EEHHHHHHHHCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087