| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669080
Identifier: 15669080
GI number: 15669080
Start: 821015
End: 821428
Strand: Reverse
Name: 15669080
Synonym: MJ0890
Alternate gene names: NA
Gene position: 821428-821015 (Counterclockwise)
Preceding gene: 15669097
Following gene: 15669078
Centisome position: 49.34
GC content: 26.57
Gene sequence:
>414_bases ATGATAAAAACTGTTATTGACAACTTATGTTATAATTTTGGTGAAAACATGAAAAATGATGATGCAATAAAAGTTTTATC TAATGAATTGTTAAAAGGAGCAAAGATGCTTTCTACTCACTGTTCAAAGTGTGGATGTCCATTATTTGAAAAGGATGGAA AGATATATTGCCCCATATGTGAAAAATTGAAAAATAAAGAGACAATTGAAAAAGGTGAAAATGAAAAAGAAATTAAAAAT GAAATTGAGAGGAAAAAATCTGAAATTAATGAGATATTGGATTTAAACAAGGTAGTAATGGATAAAATAAACTATTTAGT AATGAAACTAAAAGAAGAGGATGAAGTTAGTAGAATACGGGAGATAGCAGAGGCTATTTATGTATTAATCAAACTCAAAA AGAAGATTGAATAA
Upstream 100 bases:
>100_bases GTAGGTAAAACGATAGTCGAATCTTAAATAGCAAATTAACGTAATGATTATGCCAAATAAATTTAAACAAATCCAAATTT ATATAAACTAATGGATAAAC
Downstream 100 bases:
>100_bases TAATTAACTACTTTACTTTATTATCTTTATTTCAAAGATTGAAATATTAATCCCCTTTTCTGAAGGTATCTCAGAACCGT TATACTCAACTATTAAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MIKTVIDNLCYNFGENMKNDDAIKVLSNELLKGAKMLSTHCSKCGCPLFEKDGKIYCPICEKLKNKETIEKGENEKEIKN EIERKKSEINEILDLNKVVMDKINYLVMKLKEEDEVSRIREIAEAIYVLIKLKKKIE
Sequences:
>Translated_137_residues MIKTVIDNLCYNFGENMKNDDAIKVLSNELLKGAKMLSTHCSKCGCPLFEKDGKIYCPICEKLKNKETIEKGENEKEIKN EIERKKSEINEILDLNKVVMDKINYLVMKLKEEDEVSRIREIAEAIYVLIKLKKKIE >Mature_137_residues MIKTVIDNLCYNFGENMKNDDAIKVLSNELLKGAKMLSTHCSKCGCPLFEKDGKIYCPICEKLKNKETIEKGENEKEIKN EIERKKSEINEILDLNKVVMDKINYLVMKLKEEDEVSRIREIAEAIYVLIKLKKKIE
Specific function: Unknown
COG id: COG1645
COG function: function code R; Uncharacterized Zn-finger containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0148 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y890_METJA (Q58300)
Other databases:
- EMBL: L77117 - PIR: B64411 - RefSeq: NP_247885.1 - ProteinModelPortal: Q58300 - GeneID: 1451779 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0890 - NMPDR: fig|243232.1.peg.922 - TIGR: MJ0890 - HOGENOM: HBG540382 - OMA: AKMLGKH - ProtClustDB: PRK00420 - BioCyc: MJAN243232:MJ_0890-MONOMER - HAMAP: MF_00343 - InterPro: IPR009563 - InterPro: IPR022954
Pfam domain/function: PF06677 Auto_anti-p27
EC number: NA
Molecular weight: Translated: 15914; Mature: 15914
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTVIDNLCYNFGENMKNDDAIKVLSNELLKGAKMLSTHCSKCGCPLFEKDGKIYCPIC CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHH EKLKNKETIEKGENEKEIKNEIERKKSEINEILDLNKVVMDKINYLVMKLKEEDEVSRIR HHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EIAEAIYVLIKLKKKIE HHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKTVIDNLCYNFGENMKNDDAIKVLSNELLKGAKMLSTHCSKCGCPLFEKDGKIYCPIC CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHH EKLKNKETIEKGENEKEIKNEIERKKSEINEILDLNKVVMDKINYLVMKLKEEDEVSRIR HHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EIAEAIYVLIKLKKKIE HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087