| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669073
Identifier: 15669073
GI number: 15669073
Start: 808396
End: 809406
Strand: Direct
Name: 15669073
Synonym: MJ0883
Alternate gene names: NA
Gene position: 808396-809406 (Clockwise)
Preceding gene: 15669072
Following gene: 15669074
Centisome position: 48.55
GC content: 30.56
Gene sequence:
>1011_bases ATGCCGTTATGCCTAAAAATAAACAAAAAACATGGTGAGCAAACAAGAAGAATATTGATAGAGAATAACTTATTAAACAA GGATTATAAAATAACTTCTGAGGGAAATTATCTCTATTTACCAATAAAAGATGTTGATGAAGATATTTTAAAAAGTATTT TAAATATTGAGTTTGAGTTAGTTGATAAAGAGCTTGAAGAGAAAAAAATAATTAAAAAACCAAGTTTTAGAGAAATAATA TCAAAAAAATATAGAAAGGAAATTGATGAGGGCTTAATATCCCTCTCTTATGATGTAGTTGGTGATTTGGTAATTTTGCA GATTTCAGATGAGGTTGATGAAAAAATAAGAAAGGAGATTGGGGAATTGGCTTACAAACTAATCCCATGCAAAGGGGTTT TTAGAAGAAAGAGTGAGGTTAAAGGAGAGTTTAGAGTTAGGGAGTTAGAGCATTTAGCAGGAGAGAATAGAACTCTAACA ATCCATAAAGAGAATGGTTATCGTTTGTGGGTTGATATAGCGAAGGTTTATTTCTCTCCAAGATTGGGAGGGGAGAGAGC AAGGATTATGAAAAAGGTCTCTTTGAATGATGTGGTTGTTGATATGTTTGCTGGAGTGGGGCCTTTCTCAATAGCTTGCA AAAATGCCAAAAAAATCTATGCCATAGATATAAATCCACATGCAATAGAGCTTTTAAAAAAGAATATAAAGTTAAATAAA TTAGAACATAAGATAATTCCTATATTGAGTGATGTTAGAGAGGTTGATGTTAAAGGGAATAGGGTTATAATGAATTTGCC AAAATTTGCTCATAAATTTATAGATAAGGCATTGGATATTGTAGAAGAGGGAGGAGTTATACACTATTACACAATTGGAA AGGACTTTGATAAAGCAATAAAATTGTTTGAGAAGAAATGTGATTGTGAGGTTTTGGAAAAAAGAATAGTTAAGAGTTAT GCCCCAAGAGAATATATATTAGCTTTGGACTTTAAAATTAATAAAAAATAA
Upstream 100 bases:
>100_bases GAAAGATGTCTTTGGAAATGTTGAGACAGTTACAATAAAAGGAGGTTATAGGGTCTTAAAAAGTAAGAAATTATAAAAAT TATAATAATTTGGTGATTCT
Downstream 100 bases:
>100_bases TAATACTAATTGTCTTAATAATAAGGTGGTTCCATGGCTATTGCCTATGCTAAATTATATGAGTTGATATATAAAAATGT TAAGAATGAAAAAAGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MPLCLKINKKHGEQTRRILIENNLLNKDYKITSEGNYLYLPIKDVDEDILKSILNIEFELVDKELEEKKIIKKPSFREII SKKYRKEIDEGLISLSYDVVGDLVILQISDEVDEKIRKEIGELAYKLIPCKGVFRRKSEVKGEFRVRELEHLAGENRTLT IHKENGYRLWVDIAKVYFSPRLGGERARIMKKVSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNK LEHKIIPILSDVREVDVKGNRVIMNLPKFAHKFIDKALDIVEEGGVIHYYTIGKDFDKAIKLFEKKCDCEVLEKRIVKSY APREYILALDFKINKK
Sequences:
>Translated_336_residues MPLCLKINKKHGEQTRRILIENNLLNKDYKITSEGNYLYLPIKDVDEDILKSILNIEFELVDKELEEKKIIKKPSFREII SKKYRKEIDEGLISLSYDVVGDLVILQISDEVDEKIRKEIGELAYKLIPCKGVFRRKSEVKGEFRVRELEHLAGENRTLT IHKENGYRLWVDIAKVYFSPRLGGERARIMKKVSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNK LEHKIIPILSDVREVDVKGNRVIMNLPKFAHKFIDKALDIVEEGGVIHYYTIGKDFDKAIKLFEKKCDCEVLEKRIVKSY APREYILALDFKINKK >Mature_335_residues PLCLKINKKHGEQTRRILIENNLLNKDYKITSEGNYLYLPIKDVDEDILKSILNIEFELVDKELEEKKIIKKPSFREIIS KKYRKEIDEGLISLSYDVVGDLVILQISDEVDEKIRKEIGELAYKLIPCKGVFRRKSEVKGEFRVRELEHLAGENRTLTI HKENGYRLWVDIAKVYFSPRLGGERARIMKKVSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKL EHKIIPILSDVREVDVKGNRVIMNLPKFAHKFIDKALDIVEEGGVIHYYTIGKDFDKAIKLFEKKCDCEVLEKRIVKSYA PREYILALDFKINKK
Specific function: Unknown
COG id: COG2520
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1557 and to yeast YHR070w
Homologues:
Organism=Homo sapiens, GI145275187, Length=228, Percent_Identity=29.8245614035088, Blast_Score=88, Evalue=9e-18, Organism=Caenorhabditis elegans, GI193207539, Length=202, Percent_Identity=30.1980198019802, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI193207537, Length=201, Percent_Identity=30.3482587064677, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193207541, Length=202, Percent_Identity=30.1980198019802, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321861, Length=218, Percent_Identity=27.9816513761468, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI45551508, Length=260, Percent_Identity=31.9230769230769, Blast_Score=98, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y883_METJA (Q58293)
Other databases:
- EMBL: L77117 - PIR: C64410 - RefSeq: NP_247878.1 - PDB: 2YX1 - PDB: 2ZZM - PDB: 2ZZN - PDBsum: 2YX1 - PDBsum: 2ZZM - PDBsum: 2ZZN - ProteinModelPortal: Q58293 - SMR: Q58293 - GeneID: 1451772 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0883 - NMPDR: fig|243232.1.peg.915 - TIGR: MJ0883 - HOGENOM: HBG645264 - OMA: VIMNLPK - ProtClustDB: CLSK2392217 - BioCyc: MJAN243232:MJ_0883-MONOMER - InterPro: IPR003402
Pfam domain/function: PF02475 Met_10
EC number: NA
Molecular weight: Translated: 39000; Mature: 38869
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS00539 PYROKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLCLKINKKHGEQTRRILIENNLLNKDYKITSEGNYLYLPIKDVDEDILKSILNIEFEL CCEEEEECCCCCCHHHEEEEECCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHCCCHHH VDKELEEKKIIKKPSFREIISKKYRKEIDEGLISLSYDVVGDLVILQISDEVDEKIRKEI HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEHHHHCCEEEEEECHHHHHHHHHHH GELAYKLIPCKGVFRRKSEVKGEFRVRELEHLAGENRTLTIHKENGYRLWVDIAKVYFSP HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEHHHHHCC RLGGERARIMKKVSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNK CCCCHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCEEEEEECCHHHHHHHHHCCCHHH LEHKIIPILSDVREVDVKGNRVIMNLPKFAHKFIDKALDIVEEGGVIHYYTIGKDFDKAI HHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHH KLFEKKCDCEVLEKRIVKSYAPREYILALDFKINKK HHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEECCC >Mature Secondary Structure PLCLKINKKHGEQTRRILIENNLLNKDYKITSEGNYLYLPIKDVDEDILKSILNIEFEL CEEEEECCCCCCHHHEEEEECCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHCCCHHH VDKELEEKKIIKKPSFREIISKKYRKEIDEGLISLSYDVVGDLVILQISDEVDEKIRKEI HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEHHHHCCEEEEEECHHHHHHHHHHH GELAYKLIPCKGVFRRKSEVKGEFRVRELEHLAGENRTLTIHKENGYRLWVDIAKVYFSP HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEHHHHHCC RLGGERARIMKKVSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNK CCCCHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCEEEEEECCHHHHHHHHHCCCHHH LEHKIIPILSDVREVDVKGNRVIMNLPKFAHKFIDKALDIVEEGGVIHYYTIGKDFDKAI HHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHH KLFEKKCDCEVLEKRIVKSYAPREYILALDFKINKK HHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087