| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is dys [H]
Identifier: 15669001
GI number: 15669001
Start: 737564
End: 738676
Strand: Reverse
Name: dys [H]
Synonym: MJ0814
Alternate gene names: 15669001
Gene position: 738676-737564 (Counterclockwise)
Preceding gene: 15669002
Following gene: 15669000
Centisome position: 44.37
GC content: 33.51
Gene sequence:
>1113_bases ATGAGAGACATAAAGGATAATCCAATAAGAAGAGGCATTGCCGAGCAAAGCGAGGCAATGCATCCCGGGTATACCAATAG GGCGAAGCCCTATGGTTGTAAGAGAGATCCAAAGGATATCGTGCTTAAGGAGAGTGAAGATATTGAAGGGATAGCAATTG AAGGTCCTTGGTTAGAGGATGATATAAGCTTAGAAGAAATAATTAAGAAATACTACCTAAAAATTGGGTTTCAAGCATCA CATATTGGAAAAGCAATAAAAATCTGGAAACATATTGAAGAGAAAAGAAAAAAAGGAGATGAAATAACGGTATTTTTTGG ATATACATCAAATATTGTATCTTCTGGATTGAGAGAGATTATAGCATACCTTGTAAAACATAAAAAGATTGATATTATCG TTACAACAGCTGGAGGAGTTGAAGAAGATTTTATAAAATGCTTAAAGCCTTTTATATTGGGAGATTGGGAAGTAGATGGA AAAATGTTAAGAGAGAAGGGAATAAATAGAATTGGAAACATCTTTGTCCCAAATGACAGATATATAGCGTTTGAAGAATA TATGATGGAATTTTTTGAAGAAATTTTAAATTTACAGAGAGAGACTGGAAAAATCATTACAGCAAGTGAATTTTGCTATA AATTAGGAGAATTTATGGATAAAAAATTAAAAAGTAAAGAAAAGGAAAAATCAATATTATATTGGGCATATAAAAACAAC ATCCCAATATTCTGCCCAGCAATAACAGATGGTTCAATTGGAGACATGCTATATTTCTTTAAAAAGTATAATAAAGATGA AGAGTTGAAAATAGATGTTGCCAACGATATTGTAAAGCTAAATGATATAGCCATAAACTCTAAGGAGACAGCATGTATTG TTTTAGGTGGTTCTCTGCCAAAGCATAGCATTATAAATGCAAATCTATTTAGAGAAGGAACAGATTATGCAATATATGTC ACCACTGCCTTGCCTTGGGATGGTTCTTTAAGCGGAGCTCCACCTGAAGAAGGTGTATCGTGGGGAAAAATTGGGGCTAA GGCGGATTATGTTGAAATTTGGGGAGATGCAACAATAATATTCCCATTATTGGTTTATTGTGTGATGAAGTGA
Upstream 100 bases:
>100_bases TTGGCAGAGTTATTAATTAAAAATGCAAACAATGAAGAACTAAAATTTAAAGTAAAGGGAGAAAAATTTACAATAGACAA ATAAATCCGGTGATGATTGT
Downstream 100 bases:
>100_bases TAGTATGCTGTATGTTGTAGGTATAGGAAGCGGTAATGAGAGGCATTTTACAAAAGAGGCTGAGGAGATTTTAAATAAAG TGGATTTAATAGTGTGTTAT
Product: putative deoxyhypusine synthase
Products: NA
Alternate protein names: DHS [H]
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MRDIKDNPIRRGIAEQSEAMHPGYTNRAKPYGCKRDPKDIVLKESEDIEGIAIEGPWLEDDISLEEIIKKYYLKIGFQAS HIGKAIKIWKHIEEKRKKGDEITVFFGYTSNIVSSGLREIIAYLVKHKKIDIIVTTAGGVEEDFIKCLKPFILGDWEVDG KMLREKGINRIGNIFVPNDRYIAFEEYMMEFFEEILNLQRETGKIITASEFCYKLGEFMDKKLKSKEKEKSILYWAYKNN IPIFCPAITDGSIGDMLYFFKKYNKDEELKIDVANDIVKLNDIAINSKETACIVLGGSLPKHSIINANLFREGTDYAIYV TTALPWDGSLSGAPPEEGVSWGKIGAKADYVEIWGDATIIFPLLVYCVMK
Sequences:
>Translated_370_residues MRDIKDNPIRRGIAEQSEAMHPGYTNRAKPYGCKRDPKDIVLKESEDIEGIAIEGPWLEDDISLEEIIKKYYLKIGFQAS HIGKAIKIWKHIEEKRKKGDEITVFFGYTSNIVSSGLREIIAYLVKHKKIDIIVTTAGGVEEDFIKCLKPFILGDWEVDG KMLREKGINRIGNIFVPNDRYIAFEEYMMEFFEEILNLQRETGKIITASEFCYKLGEFMDKKLKSKEKEKSILYWAYKNN IPIFCPAITDGSIGDMLYFFKKYNKDEELKIDVANDIVKLNDIAINSKETACIVLGGSLPKHSIINANLFREGTDYAIYV TTALPWDGSLSGAPPEEGVSWGKIGAKADYVEIWGDATIIFPLLVYCVMK >Mature_370_residues MRDIKDNPIRRGIAEQSEAMHPGYTNRAKPYGCKRDPKDIVLKESEDIEGIAIEGPWLEDDISLEEIIKKYYLKIGFQAS HIGKAIKIWKHIEEKRKKGDEITVFFGYTSNIVSSGLREIIAYLVKHKKIDIIVTTAGGVEEDFIKCLKPFILGDWEVDG KMLREKGINRIGNIFVPNDRYIAFEEYMMEFFEEILNLQRETGKIITASEFCYKLGEFMDKKLKSKEKEKSILYWAYKNN IPIFCPAITDGSIGDMLYFFKKYNKDEELKIDVANDIVKLNDIAINSKETACIVLGGSLPKHSIINANLFREGTDYAIYV TTALPWDGSLSGAPPEEGVSWGKIGAKADYVEIWGDATIIFPLLVYCVMK
Specific function: Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine
COG id: COG1899
COG function: function code O; Deoxyhypusine synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoxyhypusine synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503325, Length=345, Percent_Identity=43.4782608695652, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI7108338, Length=308, Percent_Identity=38.6363636363636, Blast_Score=208, Evalue=5e-54, Organism=Homo sapiens, GI7108340, Length=308, Percent_Identity=36.3636363636364, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI17536927, Length=325, Percent_Identity=44.3076923076923, Blast_Score=283, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6321859, Length=320, Percent_Identity=45.3125, Blast_Score=278, Evalue=1e-75, Organism=Drosophila melanogaster, GI45550569, Length=348, Percent_Identity=42.5287356321839, Blast_Score=289, Evalue=3e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002773 - InterPro: IPR022899 [H]
Pfam domain/function: PF01916 DS [H]
EC number: =2.5.1.46 [H]
Molecular weight: Translated: 42160; Mature: 42160
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDIKDNPIRRGIAEQSEAMHPGYTNRAKPYGCKRDPKDIVLKESEDIEGIAIEGPWLED CCCCCCCHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCEEEEECCCCCC DISLEEIIKKYYLKIGFQASHIGKAIKIWKHIEEKRKKGDEITVFFGYTSNIVSSGLREI CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH IAYLVKHKKIDIIVTTAGGVEEDFIKCLKPFILGDWEVDGKMLREKGINRIGNIFVPNDR HHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHCCEEECCCC YIAFEEYMMEFFEEILNLQRETGKIITASEFCYKLGEFMDKKLKSKEKEKSILYWAYKNN EEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC IPIFCPAITDGSIGDMLYFFKKYNKDEELKIDVANDIVKLNDIAINSKETACIVLGGSLP CCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEHHHCEEEEEEEEECCCCCEEEEECCCCC KHSIINANLFREGTDYAIYVTTALPWDGSLSGAPPEEGVSWGKIGAKADYVEIWGDATII CCCEEECHHHCCCCCEEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCHHHH FPLLVYCVMK HHHHHHHHCC >Mature Secondary Structure MRDIKDNPIRRGIAEQSEAMHPGYTNRAKPYGCKRDPKDIVLKESEDIEGIAIEGPWLED CCCCCCCHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCEEEEECCCCCC DISLEEIIKKYYLKIGFQASHIGKAIKIWKHIEEKRKKGDEITVFFGYTSNIVSSGLREI CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH IAYLVKHKKIDIIVTTAGGVEEDFIKCLKPFILGDWEVDGKMLREKGINRIGNIFVPNDR HHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHCCEEECCCC YIAFEEYMMEFFEEILNLQRETGKIITASEFCYKLGEFMDKKLKSKEKEKSILYWAYKNN EEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC IPIFCPAITDGSIGDMLYFFKKYNKDEELKIDVANDIVKLNDIAINSKETACIVLGGSLP CCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEHHHCEEEEEEEEECCCCCEEEEECCCCC KHSIINANLFREGTDYAIYVTTALPWDGSLSGAPPEEGVSWGKIGAKADYVEIWGDATII CCCEEECHHHCCCCCEEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCHHHH FPLLVYCVMK HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]