| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is cbiH
Identifier: 15669000
GI number: 15669000
Start: 736810
End: 737559
Strand: Reverse
Name: cbiH
Synonym: MJ0813
Alternate gene names: 15669000
Gene position: 737559-736810 (Counterclockwise)
Preceding gene: 15669001
Following gene: 15668999
Centisome position: 44.3
GC content: 31.07
Gene sequence:
>750_bases ATGCTGTATGTTGTAGGTATAGGAAGCGGTAATGAGAGGCATTTTACAAAAGAGGCTGAGGAGATTTTAAATAAAGTGGA TTTAATAGTGTGTTATAAAAATTACAAAAAGTTTGTTGAGAGGCTTAACAAGCCAATATATACAACTGGAATGACAAGGG AAATTGATAGAGTTGATTATGCCTTAAAAGAGGCTAAAGATAAAGATGTTGCATTAGTTTCAAGTGGTGATGCAACAATT TATGGCTTAGCTTCGTTAGCTTATGAGATAAACGCAGTTAAAGGTTATAACGTAGATATAAAGGTTGTTCCAGGGATAAC CGCATGTTCATTAGCTTCAGCAATCTTAGGAAGTCCGTTAAATCATGATTTTGTTGTTATAAGCTTTAGTGATTTATTAA CCCCTTTAGAGACAATATTAAAGAGGTTTAGATGTGCGTTAGAGGGAGATTTTGTTATATGCATATACAATCCACTAAGT AAAAGGAGGAAAGAACCATTCTTAAAAGCTATGGAAATATTGGCTGAGTTTGCAAAGGATAAAGATTATATAATTGGGAT AGTTAAAAATGCTGGTAGAAATAAAGAAGAAGTTGTAATTACAAACTTCAAAGATCTTTATAAAAACTTAGAAAAATACT TGGAGTTTATAGACATGAATACAATATTAATCATTGGTAATTCTTCAACAAAGATTATCAATGGCAAGATGATTACACCA AGAGGCTATTTAGATAAATATAAAATTTAG
Upstream 100 bases:
>100_bases TCGTGGGGAAAAATTGGGGCTAAGGCGGATTATGTTGAAATTTGGGGAGATGCAACAATAATATTCCCATTATTGGTTTA TTGTGTGATGAAGTGATAGT
Downstream 100 bases:
>100_bases GTGAAAAATTATGCTTGAAAAAATCAGAGAGGAGTTAAACTCATATTTTTTAGAAAGGAGGGAGGAGATTGATATTGCTT TAACTTCAATCTTGGCTAAT
Product: cobalamin biosynthesis precorrin-3 methylase CbiH
Products: S-adenosyl-L-homocysteine; Precorrin 4
Alternate protein names: Cobalt-precorrin-3 methylase; Cobalt-precorrin-3 methyltransferase
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLYVVGIGSGNERHFTKEAEEILNKVDLIVCYKNYKKFVERLNKPIYTTGMTREIDRVDYALKEAKDKDVALVSSGDATI YGLASLAYEINAVKGYNVDIKVVPGITACSLASAILGSPLNHDFVVISFSDLLTPLETILKRFRCALEGDFVICIYNPLS KRRKEPFLKAMEILAEFAKDKDYIIGIVKNAGRNKEEVVITNFKDLYKNLEKYLEFIDMNTILIIGNSSTKIINGKMITP RGYLDKYKI
Sequences:
>Translated_249_residues MLYVVGIGSGNERHFTKEAEEILNKVDLIVCYKNYKKFVERLNKPIYTTGMTREIDRVDYALKEAKDKDVALVSSGDATI YGLASLAYEINAVKGYNVDIKVVPGITACSLASAILGSPLNHDFVVISFSDLLTPLETILKRFRCALEGDFVICIYNPLS KRRKEPFLKAMEILAEFAKDKDYIIGIVKNAGRNKEEVVITNFKDLYKNLEKYLEFIDMNTILIIGNSSTKIINGKMITP RGYLDKYKI >Mature_249_residues MLYVVGIGSGNERHFTKEAEEILNKVDLIVCYKNYKKFVERLNKPIYTTGMTREIDRVDYALKEAKDKDVALVSSGDATI YGLASLAYEINAVKGYNVDIKVVPGITACSLASAILGSPLNHDFVVISFSDLLTPLETILKRFRCALEGDFVICIYNPLS KRRKEPFLKAMEILAEFAKDKDYIIGIVKNAGRNKEEVVITNFKDLYKNLEKYLEFIDMNTILIIGNSSTKIINGKMITP RGYLDKYKI
Specific function: Methyltransferase that catalyzes the methylation of C-17 in cobalt-precorrin-3B to form cobalt-precorrin-4
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CBIH_METJA (Q58223)
Other databases:
- EMBL: L77117 - PIR: E64401 - RefSeq: NP_247804.1 - ProteinModelPortal: Q58223 - GeneID: 1451696 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0813 - NMPDR: fig|243232.1.peg.841 - TIGR: MJ0813 - HOGENOM: HBG305606 - OMA: EATPEMA - ProtClustDB: CLSK876341 - BioCyc: MJAN243232:MJ_0813-MONOMER - InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006363 - Gene3D: G3DSA:3.40.1010.10 - Gene3D: G3DSA:3.30.950.10 - TIGRFAMs: TIGR01466
Pfam domain/function: PF00590 TP_methylase; SSF53790 Cor/por_Metransf
EC number: 2.1.1.131
Molecular weight: Translated: 28131; Mature: 28131
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYVVGIGSGNERHFTKEAEEILNKVDLIVCYKNYKKFVERLNKPIYTTGMTREIDRVDY CEEEEEECCCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHCCCEEECCCCHHHHHHHH ALKEAKDKDVALVSSGDATIYGLASLAYEINAVKGYNVDIKVVPGITACSLASAILGSPL HHHHCCCCCEEEEECCCCEEEEHHHHHEEEECEECCCEEEEEECCCHHHHHHHHHHCCCC NHDFVVISFSDLLTPLETILKRFRCALEGDFVICIYNPLSKRRKEPFLKAMEILAEFAKD CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCHHHHHHHHHHHHHCC KDYIIGIVKNAGRNKEEVVITNFKDLYKNLEKYLEFIDMNTILIIGNSSTKIINGKMITP CCEEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECEEECC RGYLDKYKI CCCCCCCCC >Mature Secondary Structure MLYVVGIGSGNERHFTKEAEEILNKVDLIVCYKNYKKFVERLNKPIYTTGMTREIDRVDY CEEEEEECCCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHCCCEEECCCCHHHHHHHH ALKEAKDKDVALVSSGDATIYGLASLAYEINAVKGYNVDIKVVPGITACSLASAILGSPL HHHHCCCCCEEEEECCCCEEEEHHHHHEEEECEECCCEEEEEECCCHHHHHHHHHHCCCC NHDFVVISFSDLLTPLETILKRFRCALEGDFVICIYNPLSKRRKEPFLKAMEILAEFAKD CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCHHHHHHHHHHHHHCC KDYIIGIVKNAGRNKEEVVITNFKDLYKNLEKYLEFIDMNTILIIGNSSTKIINGKMITP CCEEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECEEECC RGYLDKYKI CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; Precorrin 3B
Specific reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin-4
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087