Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668995

Identifier: 15668995

GI number: 15668995

Start: 731938

End: 732354

Strand: Reverse

Name: 15668995

Synonym: MJ0808.1

Alternate gene names: NA

Gene position: 732354-731938 (Counterclockwise)

Preceding gene: 15668998

Following gene: 15668992

Centisome position: 43.99

GC content: 26.14

Gene sequence:

>417_bases
ATGCTTAAGGAGATTAAGAATGATTATGATAAAATTCGAGAGAAAATGACGCAAAAGATACAAGAACTAAATCAACAAAT
AACACAAATTAAGAAACAAATACAAATTATAGAGCAGAATAATTTATCAGATCAACAAAATCAGACGATTCAAAAAATAA
AACGACAAATATATTCAATAGAATTTGATATACTAAGAGTAGAATCTAACAGAAGTAATATGATCTATAGTAAAACATTT
GAAGACATGTGCGAATATCTTGATTCACATAGTGGCATTGGCAGGATCTTTGCAGAAAGTTTTATGAGAGAAATAGAAAA
AAATATACAGCTAATGAAACAATTAGTAATGATGGAGGATCAAATAATAAAAATTAAGCAAGAAATACGAATGATAGAAA
AAGATCTCAAAATTTAA

Upstream 100 bases:

>100_bases
AGCGGACAAGTCCTTGATTAAGTTAAAGTTATTGCACTACTTAGTTATTAAATCTAGGGAAAAGTGAATATGGATAATTA
ATTCCCTATGTGGTGATAAG

Downstream 100 bases:

>100_bases
TATAATAGTAAATATTCTCATTTATCTTTGTCTAAAAACCTATCCAAAGTTATTTAGCTTCTTTCTTTTTCAACTCATTT
TTTGAATCTCTAACTACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLKEIKNDYDKIREKMTQKIQELNQQITQIKKQIQIIEQNNLSDQQNQTIQKIKRQIYSIEFDILRVESNRSNMIYSKTF
EDMCEYLDSHSGIGRIFAESFMREIEKNIQLMKQLVMMEDQIIKIKQEIRMIEKDLKI

Sequences:

>Translated_138_residues
MLKEIKNDYDKIREKMTQKIQELNQQITQIKKQIQIIEQNNLSDQQNQTIQKIKRQIYSIEFDILRVESNRSNMIYSKTF
EDMCEYLDSHSGIGRIFAESFMREIEKNIQLMKQLVMMEDQIIKIKQEIRMIEKDLKI
>Mature_138_residues
MLKEIKNDYDKIREKMTQKIQELNQQITQIKKQIQIIEQNNLSDQQNQTIQKIKRQIYSIEFDILRVESNRSNMIYSKTF
EDMCEYLDSHSGIGRIFAESFMREIEKNIQLMKQLVMMEDQIIKIKQEIRMIEKDLKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y80A_METJA (P81321)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_247799.1
- GeneID:   1451691
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0808.1
- NMPDR:   fig|243232.1.peg.836
- TIGR:   MJ0808.1
- BioCyc:   MJAN243232:MJ_0808.1-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16750; Mature: 16750

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKEIKNDYDKIREKMTQKIQELNQQITQIKKQIQIIEQNNLSDQQNQTIQKIKRQIYSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EFDILRVESNRSNMIYSKTFEDMCEYLDSHSGIGRIFAESFMREIEKNIQLMKQLVMMED
HHHHEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIIKIKQEIRMIEKDLKI
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKEIKNDYDKIREKMTQKIQELNQQITQIKKQIQIIEQNNLSDQQNQTIQKIKRQIYSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EFDILRVESNRSNMIYSKTFEDMCEYLDSHSGIGRIFAESFMREIEKNIQLMKQLVMMED
HHHHEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIIKIKQEIRMIEKDLKI
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087