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The map label for this gene is ydcM [C]

Identifier: 15668932

GI number: 15668932

Start: 676791

End: 677627

Strand: Reverse

Name: ydcM [C]

Synonym: MJ0751

Alternate gene names: 15668932

Gene position: 677627-676791 (Counterclockwise)

Preceding gene: 15668933

Following gene: 15668931

Centisome position: 40.7

GC content: 30.47

Gene sequence:

>837_bases
ATGCTGTTTAAATTCGAGGGGGATAAAATAAAAATTATCACTGCACCAAGAAAATTTATCACTATAAATTTAGTTGTTAG
TGATTATCAGAAAAAATTTATTGAAGAGTGGAAAAATGGAAACTTCAAAATTGGAGAAGTGATTATTAAGAAAGATTCTA
TTATAATCCCATTCAAAAAAGTTGTTAATCCTAAAAATTTTGAACATATCATGACAATTGACATCAATGAAAAGAATATT
ACATACTCAATTTTTGATAAAGATGGAAACGTCATTAAGACAACCCGTTTAGATGTGTATAAGTTAAAGAGAATTCATGA
GAATTTCTCAAAAAAGAGGGAGAAAATACAAAAGAAGCTTTCCAATAAACCAATGAAGTTAAAAACTCTCATGGAAAAAT
ATTCTGGAAGGGAAAAAAGAAAAGTTGAGGATTACTTACACAAAATTTCAAAGTTTCTGATTTCAGAGGCATTAAAATAC
AATGTAAAGATACTAATGGAGGATTTAACAAATATCAGGGAGGCAGTTAATAAAAAATCAAAAAATTTTAGGAGAAGATT
AAACAGATGGAATTTTTCCAAACTCCAATTTTTTATTGAGTACAAGGCAAAGTGGGATGGTTTAGATGTTGAATATGTAA
ATCCCTCAAGAACGTCCAAACTCTGCCCAATATGTGGGTGTAAATTAGACCCGAATGGGCAGAGGTTGTTAAAATGCAAT
AATTGTAATTTAGTATTTGATAGGGATGTTGTTGCTACATTTAATTTATTTAAGAAAAGTCAGGATGTGGGGAGTTTCCG
TTCCCCCGAACGCTCCCTGATGAAGTCCTCTTATTAA

Upstream 100 bases:

>100_bases
TAGCAACATCAATTTAAAAAATTTTAGAAAGAGGAAGAGGAAAGGTTTAACAAAAAAGGATAAGCCAGAAGTTAAGAAAG
ATTTTGTAAAACTTGAGGAA

Downstream 100 bases:

>100_bases
AAGAGGACAGAACGGGAGAACCAATACAAGAGATTACTTAAAATCTATAAACACCTACATAGTGGAGGACGGTGGTTGTA
AATGGATAAAATCCAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MLFKFEGDKIKIITAPRKFITINLVVSDYQKKFIEEWKNGNFKIGEVIIKKDSIIIPFKKVVNPKNFEHIMTIDINEKNI
TYSIFDKDGNVIKTTRLDVYKLKRIHENFSKKREKIQKKLSNKPMKLKTLMEKYSGREKRKVEDYLHKISKFLISEALKY
NVKILMEDLTNIREAVNKKSKNFRRRLNRWNFSKLQFFIEYKAKWDGLDVEYVNPSRTSKLCPICGCKLDPNGQRLLKCN
NCNLVFDRDVVATFNLFKKSQDVGSFRSPERSLMKSSY

Sequences:

>Translated_278_residues
MLFKFEGDKIKIITAPRKFITINLVVSDYQKKFIEEWKNGNFKIGEVIIKKDSIIIPFKKVVNPKNFEHIMTIDINEKNI
TYSIFDKDGNVIKTTRLDVYKLKRIHENFSKKREKIQKKLSNKPMKLKTLMEKYSGREKRKVEDYLHKISKFLISEALKY
NVKILMEDLTNIREAVNKKSKNFRRRLNRWNFSKLQFFIEYKAKWDGLDVEYVNPSRTSKLCPICGCKLDPNGQRLLKCN
NCNLVFDRDVVATFNLFKKSQDVGSFRSPERSLMKSSY
>Mature_278_residues
MLFKFEGDKIKIITAPRKFITINLVVSDYQKKFIEEWKNGNFKIGEVIIKKDSIIIPFKKVVNPKNFEHIMTIDINEKNI
TYSIFDKDGNVIKTTRLDVYKLKRIHENFSKKREKIQKKLSNKPMKLKTLMEKYSGREKRKVEDYLHKISKFLISEALKY
NVKILMEDLTNIREAVNKKSKNFRRRLNRWNFSKLQFFIEYKAKWDGLDVEYVNPSRTSKLCPICGCKLDPNGQRLLKCN
NCNLVFDRDVVATFNLFKKSQDVGSFRSPERSLMKSSY

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y751_METJA (Q58161)

Other databases:

- EMBL:   L77117
- PIR:   G64393
- RefSeq:   NP_247736.1
- GeneID:   1451628
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0751
- NMPDR:   fig|243232.1.peg.773
- TIGR:   MJ0751
- OMA:   MTIDINE
- BioCyc:   MJAN243232:MJ_0751-MONOMER
- GO:   GO:0032196
- InterPro:   IPR001959
- InterPro:   IPR010095
- TIGRFAMs:   TIGR01766

Pfam domain/function: PF01385 Transposase_2; PF07282 Transposase_35

EC number: NA

Molecular weight: Translated: 32990; Mature: 32990

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKFEGDKIKIITAPRKFITINLVVSDYQKKFIEEWKNGNFKIGEVIIKKDSIIIPFKK
CEEEECCCEEEEEECCCEEEEEEEEEHHHHHHHHHHHCCCCEEEEEEEEECCCEEECHHH
VVNPKNFEHIMTIDINEKNITYSIFDKDGNVIKTTRLDVYKLKRIHENFSKKREKIQKKL
HCCCCCCCEEEEEEECCCEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
SNKPMKLKTLMEKYSGREKRKVEDYLHKISKFLISEALKYNVKILMEDLTNIREAVNKKS
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNFRRRLNRWNFSKLQFFIEYKAKWDGLDVEYVNPSRTSKLCPICGCKLDPNGQRLLKCN
HHHHHHHCCCCHHHEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCEECCCCCEEEEEC
NCNLVFDRDVVATFNLFKKSQDVGSFRSPERSLMKSSY
CCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MLFKFEGDKIKIITAPRKFITINLVVSDYQKKFIEEWKNGNFKIGEVIIKKDSIIIPFKK
CEEEECCCEEEEEECCCEEEEEEEEEHHHHHHHHHHHCCCCEEEEEEEEECCCEEECHHH
VVNPKNFEHIMTIDINEKNITYSIFDKDGNVIKTTRLDVYKLKRIHENFSKKREKIQKKL
HCCCCCCCEEEEEEECCCEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
SNKPMKLKTLMEKYSGREKRKVEDYLHKISKFLISEALKYNVKILMEDLTNIREAVNKKS
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNFRRRLNRWNFSKLQFFIEYKAKWDGLDVEYVNPSRTSKLCPICGCKLDPNGQRLLKCN
HHHHHHHCCCCHHHEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCEECCCCCEEEEEC
NCNLVFDRDVVATFNLFKKSQDVGSFRSPERSLMKSSY
CCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087