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The map label for this gene is yccM [C]

Identifier: 15668931

GI number: 15668931

Start: 675993

End: 676709

Strand: Reverse

Name: yccM [C]

Synonym: MJ0750

Alternate gene names: 15668931

Gene position: 676709-675993 (Counterclockwise)

Preceding gene: 15668932

Following gene: 15668930

Centisome position: 40.64

GC content: 28.03

Gene sequence:

>717_bases
ATGGATAAAATCCAAATATTGAGGAAAATCTCTCAAACATTATTTTTTATTTATTTTGTATTTTTGACAAGTTTTTGTTT
ATGTTTTTTTGGGATAATTGAGAAGTTTATTTTAAAGGGAAGTGTTGGACAGTTGATAGCTAAGTTGGTTGTTATTGTTG
TTTTAACTTTAATATTGGGAAGGGTTTTTTGCGGATGGATGTGCCCATTAGGATTTTTATTTGAGCTAATGTATAAATTA
AGGATGAAGTTATTTATGAAAAAGAAATTACCAACAGTTAATGAGGAAGTTCATAACAAGCTGATATATTTAAGATATGT
TGTTTTAATTCTGTCTTTAGTTTTAACTTACTATCTTTCAATCTATGCATTCTGTCAAGTCTGTCCAATTGGATTTTTAA
CGAATCTTTACGGAACAGTTATATCCCTTATAATATTGATTTTCTTTTTAAGCCTATCCTTCTTTGTTCCGATGGCATTT
TGTAGATATTTCTGCCCTTTAGGAGCGTTTTTATCAATATTTTCAATAAAACCATTCTTTCAATTAAAAACCAATAACAA
CTGTGTTAAATGCAAACTTTGTGAGTTTAAATGTCCAATGCAAATAAAAATAACTGAAAAACTTGACCAAAAGGAATGTA
TAAGATGCTTTGAATGTAAAAGTAGCTGTAAAAAAGATGCCTTGTCCTTTTCTTATGCATTCAAAAAGAGAAGTTAA

Upstream 100 bases:

>100_bases
GATGAAGTCCTCTTATTAAAAGAGGACAGAACGGGAGAACCAATACAAGAGATTACTTAAAATCTATAAACACCTACATA
GTGGAGGACGGTGGTTGTAA

Downstream 100 bases:

>100_bases
TAAAAACTTCTATTTTTTATTAACAATTATACAAATTTTTTATTAGATTTATCTAATTTTTATCCTCCTATTTTTAAAAT
ATCTGGCTAAAAATCTTTTT

Product: ferredoxin-type protein NapH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MDKIQILRKISQTLFFIYFVFLTSFCLCFFGIIEKFILKGSVGQLIAKLVVIVVLTLILGRVFCGWMCPLGFLFELMYKL
RMKLFMKKKLPTVNEEVHNKLIYLRYVVLILSLVLTYYLSIYAFCQVCPIGFLTNLYGTVISLIILIFFLSLSFFVPMAF
CRYFCPLGAFLSIFSIKPFFQLKTNNNCVKCKLCEFKCPMQIKITEKLDQKECIRCFECKSSCKKDALSFSYAFKKRS

Sequences:

>Translated_238_residues
MDKIQILRKISQTLFFIYFVFLTSFCLCFFGIIEKFILKGSVGQLIAKLVVIVVLTLILGRVFCGWMCPLGFLFELMYKL
RMKLFMKKKLPTVNEEVHNKLIYLRYVVLILSLVLTYYLSIYAFCQVCPIGFLTNLYGTVISLIILIFFLSLSFFVPMAF
CRYFCPLGAFLSIFSIKPFFQLKTNNNCVKCKLCEFKCPMQIKITEKLDQKECIRCFECKSSCKKDALSFSYAFKKRS
>Mature_238_residues
MDKIQILRKISQTLFFIYFVFLTSFCLCFFGIIEKFILKGSVGQLIAKLVVIVVLTLILGRVFCGWMCPLGFLFELMYKL
RMKLFMKKKLPTVNEEVHNKLIYLRYVVLILSLVLTYYLSIYAFCQVCPIGFLTNLYGTVISLIILIFFLSLSFFVPMAF
CRYFCPLGAFLSIFSIKPFFQLKTNNNCVKCKLCEFKCPMQIKITEKLDQKECIRCFECKSSCKKDALSFSYAFKKRS

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains

Homologues:

Organism=Escherichia coli, GI1787226, Length=195, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y750_METJA (Q58160)

Other databases:

- EMBL:   L77117
- PIR:   F64393
- RefSeq:   NP_247735.1
- ProteinModelPortal:   Q58160
- GeneID:   1451627
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0750
- NMPDR:   fig|243232.1.peg.772
- TIGR:   MJ0750
- HOGENOM:   HBG539111
- OMA:   DEKECIR
- ProtClustDB:   CLSK876316
- BioCyc:   MJAN243232:MJ_0750-MONOMER
- GO:   GO:0006810
- InterPro:   IPR017896
- InterPro:   IPR017900

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27777; Mature: 27777

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd5e307c)-; HASH(0xd569da4)-; HASH(0xd63429c)-; HASH(0xc992ef4)-;

Cys/Met content:

6.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIQILRKISQTLFFIYFVFLTSFCLCFFGIIEKFILKGSVGQLIAKLVVIVVLTLILG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RVFCGWMCPLGFLFELMYKLRMKLFMKKKLPTVNEEVHNKLIYLRYVVLILSLVLTYYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IYAFCQVCPIGFLTNLYGTVISLIILIFFLSLSFFVPMAFCRYFCPLGAFLSIFSIKPFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QLKTNNNCVKCKLCEFKCPMQIKITEKLDQKECIRCFECKSSCKKDALSFSYAFKKRS
EEECCCCEEEEEEECCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MDKIQILRKISQTLFFIYFVFLTSFCLCFFGIIEKFILKGSVGQLIAKLVVIVVLTLILG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RVFCGWMCPLGFLFELMYKLRMKLFMKKKLPTVNEEVHNKLIYLRYVVLILSLVLTYYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IYAFCQVCPIGFLTNLYGTVISLIILIFFLSLSFFVPMAFCRYFCPLGAFLSIFSIKPFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QLKTNNNCVKCKLCEFKCPMQIKITEKLDQKECIRCFECKSSCKKDALSFSYAFKKRS
EEECCCCEEEEEEECCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087