Click here to switch to the map view.

The map label for this gene is 15668890

Identifier: 15668890

GI number: 15668890

Start: 634421

End: 634939

Strand: Reverse

Name: 15668890

Synonym: MJ0708

Alternate gene names: NA

Gene position: 634939-634421 (Counterclockwise)

Preceding gene: 15668894

Following gene: 15668889

Centisome position: 38.14

GC content: 31.41

Gene sequence:

>519_bases
GTGATAACAATGCCGAAGCTTTTCATATATCATGCAAATCAGTGCAATCCAAAAAAATGCACATCCTTAAAAATGGCTAA
GATGAATAAAGCCATTTTGTTAAAAAATCCTTATAAAGTTCCAAAAAACTCTTTAATACTGAATCCTTACGCTGAAAAAG
CTCTATCTCCAGAAGATAAAGAGATAGTGGAAAAGTTTGGAATAACTGCTTTAGATTGTTCATGGAAAGAAGCGGAGTTA
ATGTTTAAGAAATTTAAATTTAAAAATCAAAGGTCTCTACCGTTTTTAGTTGCATGCAACCCTATAAATTATGGAAAGCC
ATGCATGCTTTCAACATTGGAAGCTTTTATTGCCGCTTTATATATAACTAACTTTAAGGATGAAGCTTGGGATTTAACCT
CCTGTTTTAAATGGGCAGAAACATTTATAAAGGTTAATTATGAATTATTAGAAAGATACTCAAATGCTAAAAATTCAATG
GAAGTTGTGGAAATTCAGCAGGACTTTCTCAGGAAATAA

Upstream 100 bases:

>100_bases
CCAACAATATTTCAACATTTTTCATCGTCTATCACCACAATAACAGTAAAAAATAAATACTACTTATACAACTTAATTTT
CTTTACCATTTCACAAAATT

Downstream 100 bases:

>100_bases
ATATTCTATTGATTATTGCTGCCTAAAGGGCATCTAAAGTTCCAAAAGTAAAATATATAACTAAAATTTAAATCTGTCAA
AAAACATAAAAACATATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MITMPKLFIYHANQCNPKKCTSLKMAKMNKAILLKNPYKVPKNSLILNPYAEKALSPEDKEIVEKFGITALDCSWKEAEL
MFKKFKFKNQRSLPFLVACNPINYGKPCMLSTLEAFIAALYITNFKDEAWDLTSCFKWAETFIKVNYELLERYSNAKNSM
EVVEIQQDFLRK

Sequences:

>Translated_172_residues
MITMPKLFIYHANQCNPKKCTSLKMAKMNKAILLKNPYKVPKNSLILNPYAEKALSPEDKEIVEKFGITALDCSWKEAEL
MFKKFKFKNQRSLPFLVACNPINYGKPCMLSTLEAFIAALYITNFKDEAWDLTSCFKWAETFIKVNYELLERYSNAKNSM
EVVEIQQDFLRK
>Mature_172_residues
MITMPKLFIYHANQCNPKKCTSLKMAKMNKAILLKNPYKVPKNSLILNPYAEKALSPEDKEIVEKFGITALDCSWKEAEL
MFKKFKFKNQRSLPFLVACNPINYGKPCMLSTLEAFIAALYITNFKDEAWDLTSCFKWAETFIKVNYELLERYSNAKNSM
EVVEIQQDFLRK

Specific function: Unknown

COG id: COG2042

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0293 family

Homologues:

Organism=Homo sapiens, GI47777330, Length=165, Percent_Identity=35.7575757575758, Blast_Score=127, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI25148466, Length=168, Percent_Identity=38.0952380952381, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6324579, Length=168, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=9e-25,
Organism=Drosophila melanogaster, GI24647066, Length=165, Percent_Identity=40.6060606060606, Blast_Score=134, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y708_METJA (Q58118)

Other databases:

- EMBL:   L77117
- PIR:   D64388
- RefSeq:   NP_247693.1
- GeneID:   1451576
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0708
- NMPDR:   fig|243232.1.peg.730
- TIGR:   MJ0708
- HOGENOM:   HBG527152
- OMA:   TALDCSW
- ProtClustDB:   PRK02287
- BioCyc:   MJAN243232:MJ_0708-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01116
- InterPro:   IPR007177
- InterPro:   IPR007209
- InterPro:   IPR022968
- ProDom:   PD016638

Pfam domain/function: PF04034 DUF367; PF04068 RLI

EC number: NA

Molecular weight: Translated: 20030; Mature: 20030

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITMPKLFIYHANQCNPKKCTSLKMAKMNKAILLKNPYKVPKNSLILNPYAEKALSPEDK
CCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCHHHHCCCCCHH
EIVEKFGITALDCSWKEAELMFKKFKFKNQRSLPFLVACNPINYGKPCMLSTLEAFIAAL
HHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
YITNFKDEAWDLTSCFKWAETFIKVNYELLERYSNAKNSMEVVEIQQDFLRK
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MITMPKLFIYHANQCNPKKCTSLKMAKMNKAILLKNPYKVPKNSLILNPYAEKALSPEDK
CCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCHHHHCCCCCHH
EIVEKFGITALDCSWKEAELMFKKFKFKNQRSLPFLVACNPINYGKPCMLSTLEAFIAAL
HHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
YITNFKDEAWDLTSCFKWAETFIKVNYELLERYSNAKNSMEVVEIQQDFLRK
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087