| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is ssnA [C]
Identifier: 15668880
GI number: 15668880
Start: 624694
End: 625836
Strand: Reverse
Name: ssnA [C]
Synonym: MJ0699
Alternate gene names: 15668880
Gene position: 625836-624694 (Counterclockwise)
Preceding gene: 15668889
Following gene: 15668877
Centisome position: 37.59
GC content: 32.28
Gene sequence:
>1143_bases ATGGTGGTCTTTTTGCTATTAAAAAGCCAATTTCTATATGGGGAGGACTTTAAGCTAAGAAAAGGAACTTTAATTATTGA AGAAGGCATAATAAAAGGTTTCACGGATGAACATAATGAGAGAGAAGTTATTGAATTTAAAGGGCTTGTTATTCCTTCCC TTATAAATGCCCACACCCACATAGCTGATAATAGTATAAAGGACATAGGGATTAATAAAACTTTGGATGAGTTGGTGAAA CCCCCAAATGGTTTAAAGCATAGATATTTGACTGAGTGTAGCGATGATTTATTAGCTGAAGGCATGAAACTTGGTTTAGG AGATATGAGAGAGCATGGAATAAAATATTTTTGTGATTTTAGAGAAAATGGAGTAAGAGGGATTAGTCTATTAAATAAAG CTTTAAAATGCTATGATTATCCAAAGGCAATAATCTTAGGAAGGCCTATAAAGGTTGATAAAGATGAGATTGAAGAAGTT TTAAAAGTCTCTAATGGTTTAGGGCTAAGTGGGGCTAATGAGTTTAAAGATGATGAGCTAAAATTGATTTTTAAAATCTT TAAGAAGTTTAAAGAAAAAGATGATAAGAAATTATTTGCCATACACGCAGCTGAGCATAGGGGGGCTGTGGAATACAGCT TAAACAAATATGGTATGACAGAGGTTGAGAGATTAATAGATTTAAAAATAAAACCAGATTTTATTGTTCATGGGACACAT TTAACAGATAATGACTTAGAGCTATTAAAAGAAAATAATATTCCAGTTGTTGCTTGTGTAAGAGCTAATCTATCCTTTAA TGTAGGAATGCCAAAGTTGAATGAGCTTAACGACAACTTATTGGTTGGGATTGGAACAGATAACTTTATGGCAAACTCTC CTTCAATATTTAAAGAAATGGACTTCATTTATAAGCTCTACCACATAGAACCAAAGGATATCTTGAGAATGGCAACAATA AACAACGCAAAGATATTAAAGCTTGAGAATGTTGGTTTAGTAGATGAGGGCTTTAAAGCTGTCTTTACCTTTATAAAACC AACAAATGCCATTTTGTTTTCAAAGAATATTATTGCTTCTGTAGTTACAAGATGTGAAAAGGGAGATGTTGTAGATTTTA GCTTAATGGAAAATGAAGAATAA
Upstream 100 bases:
>100_bases CTCTAAATTAAAAATTGACATAAGAGAGTGTAAGAGAAATATTAACAATACAACTTTTATTACTAATTTTAGTTTATTAT CAATCATAAATTAAACCCCA
Downstream 100 bases:
>100_bases GACATTTATAGAATATTTGTTTATAATTTATTATTAGGGTTTTAGGATTTTTAATTTTGTTATTTGGTTTATGGATTGTC TTGTTGTATAAGTTTGGAAT
Product: chlorohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MVVFLLLKSQFLYGEDFKLRKGTLIIEEGIIKGFTDEHNEREVIEFKGLVIPSLINAHTHIADNSIKDIGINKTLDELVK PPNGLKHRYLTECSDDLLAEGMKLGLGDMREHGIKYFCDFRENGVRGISLLNKALKCYDYPKAIILGRPIKVDKDEIEEV LKVSNGLGLSGANEFKDDELKLIFKIFKKFKEKDDKKLFAIHAAEHRGAVEYSLNKYGMTEVERLIDLKIKPDFIVHGTH LTDNDLELLKENNIPVVACVRANLSFNVGMPKLNELNDNLLVGIGTDNFMANSPSIFKEMDFIYKLYHIEPKDILRMATI NNAKILKLENVGLVDEGFKAVFTFIKPTNAILFSKNIIASVVTRCEKGDVVDFSLMENEE
Sequences:
>Translated_380_residues MVVFLLLKSQFLYGEDFKLRKGTLIIEEGIIKGFTDEHNEREVIEFKGLVIPSLINAHTHIADNSIKDIGINKTLDELVK PPNGLKHRYLTECSDDLLAEGMKLGLGDMREHGIKYFCDFRENGVRGISLLNKALKCYDYPKAIILGRPIKVDKDEIEEV LKVSNGLGLSGANEFKDDELKLIFKIFKKFKEKDDKKLFAIHAAEHRGAVEYSLNKYGMTEVERLIDLKIKPDFIVHGTH LTDNDLELLKENNIPVVACVRANLSFNVGMPKLNELNDNLLVGIGTDNFMANSPSIFKEMDFIYKLYHIEPKDILRMATI NNAKILKLENVGLVDEGFKAVFTFIKPTNAILFSKNIIASVVTRCEKGDVVDFSLMENEE >Mature_380_residues MVVFLLLKSQFLYGEDFKLRKGTLIIEEGIIKGFTDEHNEREVIEFKGLVIPSLINAHTHIADNSIKDIGINKTLDELVK PPNGLKHRYLTECSDDLLAEGMKLGLGDMREHGIKYFCDFRENGVRGISLLNKALKCYDYPKAIILGRPIKVDKDEIEEV LKVSNGLGLSGANEFKDDELKLIFKIFKKFKEKDDKKLFAIHAAEHRGAVEYSLNKYGMTEVERLIDLKIKPDFIVHGTH LTDNDLELLKENNIPVVACVRANLSFNVGMPKLNELNDNLLVGIGTDNFMANSPSIFKEMDFIYKLYHIEPKDILRMATI NNAKILKLENVGLVDEGFKAVFTFIKPTNAILFSKNIIASVVTRCEKGDVVDFSLMENEE
Specific function: Unknown
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y699_METJA (Q58110)
Other databases:
- EMBL: L77117 - PIR: C64387 - RefSeq: NP_247683.1 - ProteinModelPortal: Q58110 - GeneID: 1451566 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0699 - NMPDR: fig|243232.1.peg.720 - TIGR: MJ0699 - HOGENOM: HBG551742 - OMA: LVKPPNG - ProtClustDB: PRK07213 - BioCyc: MJAN243232:MJ_0699-MONOMER - InterPro: IPR006680
Pfam domain/function: PF01979 Amidohydro_1
EC number: NA
Molecular weight: Translated: 43054; Mature: 43054
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVFLLLKSQFLYGEDFKLRKGTLIIEEGIIKGFTDEHNEREVIEFKGLVIPSLINAHTH CEEEEEEECHHHCCCCCEEECCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH IADNSIKDIGINKTLDELVKPPNGLKHRYLTECSDDLLAEGMKLGLGDMREHGIKYFCDF CCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCHHHHCCCEEEEEC RENGVRGISLLNKALKCYDYPKAIILGRPIKVDKDEIEEVLKVSNGLGLSGANEFKDDEL CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH KLIFKIFKKFKEKDDKKLFAIHAAEHRGAVEYSLNKYGMTEVERLIDLKIKPDFIVHGTH HHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHEEEECCCEEEECCC LTDNDLELLKENNIPVVACVRANLSFNVGMPKLNELNDNLLVGIGTDNFMANSPSIFKEM CCCCHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHH DFIYKLYHIEPKDILRMATINNAKILKLENVGLVDEGFKAVFTFIKPTNAILFSKNIIAS HHHHHHHCCCHHHHHHHEECCCEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHHH VVTRCEKGDVVDFSLMENEE HHHHCCCCCEEEEEECCCCC >Mature Secondary Structure MVVFLLLKSQFLYGEDFKLRKGTLIIEEGIIKGFTDEHNEREVIEFKGLVIPSLINAHTH CEEEEEEECHHHCCCCCEEECCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH IADNSIKDIGINKTLDELVKPPNGLKHRYLTECSDDLLAEGMKLGLGDMREHGIKYFCDF CCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCHHHHCCCEEEEEC RENGVRGISLLNKALKCYDYPKAIILGRPIKVDKDEIEEVLKVSNGLGLSGANEFKDDEL CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH KLIFKIFKKFKEKDDKKLFAIHAAEHRGAVEYSLNKYGMTEVERLIDLKIKPDFIVHGTH HHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHEEEECCCEEEECCC LTDNDLELLKENNIPVVACVRANLSFNVGMPKLNELNDNLLVGIGTDNFMANSPSIFKEM CCCCHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHH DFIYKLYHIEPKDILRMATINNAKILKLENVGLVDEGFKAVFTFIKPTNAILFSKNIIAS HHHHHHHCCCHHHHHHHEECCCEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHHH VVTRCEKGDVVDFSLMENEE HHHHCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087