Click here to switch to the map view.

The map label for this gene is rps19e

Identifier: 15668873

GI number: 15668873

Start: 618311

End: 618757

Strand: Reverse

Name: rps19e

Synonym: MJ0692

Alternate gene names: 15668873

Gene position: 618757-618311 (Counterclockwise)

Preceding gene: 15668874

Following gene: 15668872

Centisome position: 37.16

GC content: 36.02

Gene sequence:

>447_bases
ATGGTAACTGTCTATGATGTTCCAGCTGATAAGTTAATTCAGAAGACAGCTGAGAAATTAAAAGAGATGAATATAGGAGT
TCCAGAATGGGTAGATTTTGTTAAGACAGGAGTTAGCAGAGAGAGAAGACCAGACCAAGATGACTGGTGGTATATAAGGT
GTGCATCAATCTTAAGAAAAATCTATATTTACGGCCCAGTAGGTGTTTCAAGATTAAGAACTGCTTACGGAGGAAGAAAA
AACAGAGGTCATGAACCAGAACACTTCTACAAAGGTAGTGGAAACATCATTAGAAAAGCTTTACAAGAATTAGAAAAATT
AGGTTTAGTTGAAAAGACACCTGAGGGAAGAGTTGTTACTCCAAAAGGAAGAAGTTTCTTAGACAACATTGCTAAAGAGG
TTAGGGATGAAATAATTAATGAAATCCCTGCTCTTGCTAAATACTAA

Upstream 100 bases:

>100_bases
ATTTTATGCTACAAAAACTCATAATCTTAAACACAAAATAAATAGATTAGAAAGAAAATCAAAATAAATTAATTAAAAAA
TAATTAAGAGAGGTGCAAAA

Downstream 100 bases:

>100_bases
GGGGATGCTAAATGGATGTTGAAGAAATTAAAAGAAAAAAGCTTCTTGAATTGCAAAAAAAGCTTGCTGAACAACAACAG
CAAGAAGAGGCATTATTAGA

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MVTVYDVPADKLIQKTAEKLKEMNIGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIYGPVGVSRLRTAYGGRK
NRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTPEGRVVTPKGRSFLDNIAKEVRDEIINEIPALAKY

Sequences:

>Translated_148_residues
MVTVYDVPADKLIQKTAEKLKEMNIGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIYGPVGVSRLRTAYGGRK
NRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTPEGRVVTPKGRSFLDNIAKEVRDEIINEIPALAKY
>Mature_148_residues
MVTVYDVPADKLIQKTAEKLKEMNIGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIYGPVGVSRLRTAYGGRK
NRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTPEGRVVTPKGRSFLDNIAKEVRDEIINEIPALAKY

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family

Homologues:

Organism=Homo sapiens, GI4506695, Length=135, Percent_Identity=42.2222222222222, Blast_Score=103, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17508697, Length=139, Percent_Identity=41.0071942446043, Blast_Score=108, Evalue=7e-25,
Organism=Saccharomyces cerevisiae, GI6324027, Length=139, Percent_Identity=42.4460431654676, Blast_Score=96, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6324451, Length=139, Percent_Identity=42.4460431654676, Blast_Score=96, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24649452, Length=135, Percent_Identity=42.2222222222222, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17647891, Length=135, Percent_Identity=42.2222222222222, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24642576, Length=135, Percent_Identity=42.2222222222222, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24642574, Length=135, Percent_Identity=42.2222222222222, Blast_Score=102, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS19E_METJA (P54057)

Other databases:

- EMBL:   L77117
- PIR:   D64386
- RefSeq:   NP_247676.1
- ProteinModelPortal:   P54057
- SMR:   P54057
- GeneID:   1451558
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0692
- NMPDR:   fig|243232.1.peg.713
- TIGR:   MJ0692
- HOGENOM:   HBG594417
- OMA:   GRKNRGH
- ProtClustDB:   PRK09333
- BioCyc:   MJAN243232:MJ_0692-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- InterPro:   IPR001266
- InterPro:   IPR018277
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PANTHER:   PTHR11710
- ProDom:   PD003854

Pfam domain/function: PF01090 Ribosomal_S19e

EC number: NA

Molecular weight: Translated: 17030; Mature: 17030

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00628 RIBOSOMAL_S19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTVYDVPADKLIQKTAEKLKEMNIGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRK
CEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
IYIYGPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTPEGRVVT
HHHCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEC
PKGRSFLDNIAKEVRDEIINEIPALAKY
CCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVTVYDVPADKLIQKTAEKLKEMNIGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRK
CEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
IYIYGPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTPEGRVVT
HHHCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEC
PKGRSFLDNIAKEVRDEIINEIPALAKY
CCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087