| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668872
Identifier: 15668872
GI number: 15668872
Start: 617970
End: 618299
Strand: Reverse
Name: 15668872
Synonym: MJ0691
Alternate gene names: NA
Gene position: 618299-617970 (Counterclockwise)
Preceding gene: 15668873
Following gene: 15668871
Centisome position: 37.14
GC content: 35.15
Gene sequence:
>330_bases ATGGATGTTGAAGAAATTAAAAGAAAAAAGCTTCTTGAATTGCAAAAAAAGCTTGCTGAACAACAACAGCAAGAAGAGGC ATTATTAGAGGCGGAGATGCAAAAAAGAGCTTTATTAAGGAAAATATTAACACCTGAAGCAAGAGAGAGATTGGAGAGAA TAAGATTGGCAAGACCAGAATTTGCTGAAGCTGTTGAAGTCCAACTAATCCAATTAGCTCAACTTGGAAGATTACCAATC CCATTGAGTGATGAGGACTTTAAAGCTTTACTCGAGAGAATAAGTGCATTGACAAAGAGAAAGAGAGAAATTAAAATTGT TAGAAAGTGA
Upstream 100 bases:
>100_bases CTCCAAAAGGAAGAAGTTTCTTAGACAACATTGCTAAAGAGGTTAGGGATGAAATAATTAATGAAATCCCTGCTCTTGCT AAATACTAAGGGGATGCTAA
Downstream 100 bases:
>100_bases AACTTATGGATGTTCATGTTCTCTTTAGTGGAGGGAAAGATAGCTCCCTCTCTGCAGTGATATTAAAAAAACTTGGTTAC AATCCTCATCTAATAACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MDVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQKRALLRKILTPEARERLERIRLARPEFAEAVEVQLIQLAQLGRLPI PLSDEDFKALLERISALTKRKREIKIVRK
Sequences:
>Translated_109_residues MDVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQKRALLRKILTPEARERLERIRLARPEFAEAVEVQLIQLAQLGRLPI PLSDEDFKALLERISALTKRKREIKIVRK >Mature_109_residues MDVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQKRALLRKILTPEARERLERIRLARPEFAEAVEVQLIQLAQLGRLPI PLSDEDFKALLERISALTKRKREIKIVRK
Specific function: Unknown
COG id: COG2118
COG function: function code R; DNA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PDCD5 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y691_METJA (Q58103)
Other databases:
- EMBL: L77117 - PIR: C64386 - RefSeq: NP_247675.1 - ProteinModelPortal: Q58103 - SMR: Q58103 - GeneID: 1451557 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0691 - NMPDR: fig|243232.1.peg.712 - TIGR: MJ0691 - HOGENOM: HBG726401 - OMA: LYQAGQI - ProtClustDB: PRK04239 - BioCyc: MJAN243232:MJ_0691-MONOMER - HAMAP: MF_00026 - InterPro: IPR022889 - InterPro: IPR002836 - Gene3D: G3DSA:1.10.8.140 - PANTHER: PTHR10840 - PIRSF: PIRSF015730
Pfam domain/function: PF01984 dsDNA_bind; SSF46950 TFAR19-related
EC number: NA
Molecular weight: Translated: 12893; Mature: 12893
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQKRALLRKILTPEARERLERIRLARPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCH FAEAVEVQLIQLAQLGRLPIPLSDEDFKALLERISALTKRKREIKIVRK HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQKRALLRKILTPEARERLERIRLARPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCH FAEAVEVQLIQLAQLGRLPIPLSDEDFKALLERISALTKRKREIKIVRK HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087