Click here to switch to the map view.

The map label for this gene is rpl32e

Identifier: 15668649

GI number: 15668649

Start: 416858

End: 417298

Strand: Direct

Name: rpl32e

Synonym: MJ0472

Alternate gene names: 15668649

Gene position: 416858-417298 (Clockwise)

Preceding gene: 15668648

Following gene: 15668650

Centisome position: 25.04

GC content: 34.69

Gene sequence:

>441_bases
ATGAACAGGCTGTTAAGATTAAGATTTAAATTAAAAATGAAAAAGCCTGACTTTATAAGGCAAGAAGCTCACAGACACAA
AAGGTTGGGAGAGAAGTGGAGAAGACCAAAAGGAAGACACAGTAAGATGAGATTAAAGTGGAAGGAAAAACCTCCAGTTG
TTGAGATTGGTTACAGAAGCCCTAAGGCAGTAAGAGGCTTACACCCAAGTGGATTGGAGGATGTTTTGGTTTATAATGTA
AAAGATTTAGAGAAATTAAATCCAGAAACACAGGGAGCAAGAATAGCTTCAACAGTTGGTAAAAGAAAGAAAATTGAAAT
TATCATAAGAGCAAGAGAGTTAGGAATAAGAATCTTAAACATATCAGAAGAGAAACAGGAAGAGTTGTTAAAATTAGCTG
AAAAACAGGAAGCTCAAGAAGTTAATGAAACTAACGAATAA

Upstream 100 bases:

>100_bases
ACAAGAATTAAAGGAAGAGACCCAAGAGTCTTCCAGGATGGAATTTACATTGTAGAGAAAGCTGGAAAAGCTATCTAAAA
AATTTAGTTGAGGGAGAGTT

Downstream 100 bases:

>100_bases
ATTATTTTCAATCCCTCACTCTTTAAGATAAATCTGCTTTTGTTATAGGTGATAATTATGGATGTATCCGTTCAAAGAAG
AATGGCGGCTGAGATATTAA

Product: 50S ribosomal protein L32e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNRLLRLRFKLKMKKPDFIRQEAHRHKRLGEKWRRPKGRHSKMRLKWKEKPPVVEIGYRSPKAVRGLHPSGLEDVLVYNV
KDLEKLNPETQGARIASTVGKRKKIEIIIRARELGIRILNISEEKQEELLKLAEKQEAQEVNETNE

Sequences:

>Translated_146_residues
MNRLLRLRFKLKMKKPDFIRQEAHRHKRLGEKWRRPKGRHSKMRLKWKEKPPVVEIGYRSPKAVRGLHPSGLEDVLVYNV
KDLEKLNPETQGARIASTVGKRKKIEIIIRARELGIRILNISEEKQEELLKLAEKQEAQEVNETNE
>Mature_146_residues
MNRLLRLRFKLKMKKPDFIRQEAHRHKRLGEKWRRPKGRHSKMRLKWKEKPPVVEIGYRSPKAVRGLHPSGLEDVLVYNV
KDLEKLNPETQGARIASTVGKRKKIEIIIRARELGIRILNISEEKQEELLKLAEKQEAQEVNETNE

Specific function: Unknown

COG id: COG1717

COG function: function code J; Ribosomal protein L32E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32e family

Homologues:

Organism=Homo sapiens, GI4506635, Length=105, Percent_Identity=35.2380952380952, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI55743130, Length=105, Percent_Identity=35.2380952380952, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI55743128, Length=105, Percent_Identity=35.2380952380952, Blast_Score=67, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6319378, Length=105, Percent_Identity=38.0952380952381, Blast_Score=71, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24651273, Length=112, Percent_Identity=35.7142857142857, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221460572, Length=112, Percent_Identity=35.7142857142857, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221460569, Length=112, Percent_Identity=35.7142857142857, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17864106, Length=112, Percent_Identity=35.7142857142857, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24651276, Length=112, Percent_Identity=35.7142857142857, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_METJA (P54010)

Other databases:

- EMBL:   L77117
- PIR:   H64358
- RefSeq:   NP_247448.1
- ProteinModelPortal:   P54010
- GeneID:   1451334
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0472
- NMPDR:   fig|243232.1.peg.485
- TIGR:   MJ0472
- HOGENOM:   HBG497568
- OMA:   FKGQYLM
- ProtClustDB:   PRK08562
- BioCyc:   MJAN243232:MJ_0472-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00810
- InterPro:   IPR001515
- InterPro:   IPR018263
- PANTHER:   PTHR23413:SF1
- ProDom:   PD003823

Pfam domain/function: PF01655 Ribosomal_L32e; SSF52042 Ribosomal_L32e

EC number: NA

Molecular weight: Translated: 17275; Mature: 17275

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: PS00580 RIBOSOMAL_L32E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLLRLRFKLKMKKPDFIRQEAHRHKRLGEKWRRPKGRHSKMRLKWKEKPPVVEIGYRS
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCC
PKAVRGLHPSGLEDVLVYNVKDLEKLNPETQGARIASTVGKRKKIEIIIRARELGIRILN
CHHHCCCCCCCCCHHEEECHHHHHHCCCCCCCHHHHHHHCCCCEEEEEEEEHHHCEEEEC
ISEEKQEELLKLAEKQEAQEVNETNE
CCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNRLLRLRFKLKMKKPDFIRQEAHRHKRLGEKWRRPKGRHSKMRLKWKEKPPVVEIGYRS
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCC
PKAVRGLHPSGLEDVLVYNVKDLEKLNPETQGARIASTVGKRKKIEIIIRARELGIRILN
CHHHCCCCCCCCCHHEEECHHHHHHCCCCCCCHHHHHHHCCCCEEEEEEEEHHHCEEEEC
ISEEKQEELLKLAEKQEAQEVNETNE
CCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087