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The map label for this gene is rpl19e

Identifier: 15668650

GI number: 15668650

Start: 417347

End: 417802

Strand: Direct

Name: rpl19e

Synonym: MJ0473

Alternate gene names: 15668650

Gene position: 417347-417802 (Clockwise)

Preceding gene: 15668649

Following gene: 15668651

Centisome position: 25.07

GC content: 36.18

Gene sequence:

>456_bases
GTGATAATTATGGATGTATCCGTTCAAAGAAGAATGGCGGCTGAGATATTAAAATGTGGAATAGAGAGGGTTTGGATTGA
CCCAACTCAATTAGATAGAGTCAAAATGGCAATGTCAAAAGATGATATAAGAGCTCTAATTAAAGAAGGAGTTATTAAGA
AAAAGCAGAAGAAAGGAATTAGCAGTGCGAGAGTTAAAAAGTTGAAAGAGCAGAGAAAAAAGGGTAGAAGAAGAGGTCCA
GGTTCAAGAAGAGGAGCTGCTGGTGCAAGAACTCCACCAAAAGAAAGATGGATGGCTACAATTAGAGCTTTAAGAAAAAC
TCTTAAACAGTTGAGAGATTCTGGAAAAATTGATAGAAAAGTTTATAGAAAACTTTACAGAATGGCAAAAGGAGGAGCAT
TTAGAAGTAGAAGCCACCTCTTCCTTTACATGAGAGAACACGAACTCTTAAAATAA

Upstream 100 bases:

>100_bases
AAAATTAGCTGAAAAACAGGAAGCTCAAGAAGTTAATGAAACTAACGAATAAATTATTTTCAATCCCTCACTCTTTAAGA
TAAATCTGCTTTTGTTATAG

Downstream 100 bases:

>100_bases
TTAAACAATTTTTATCAGGAAGGTGAGAAATTATGGCAACAGGTCCAACTTATAGGGTTAAGTTTAGAAGAAGAAGAGAA
GCAAAAACTGACTACAGAAA

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MIIMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGP
GSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLYMREHELLK

Sequences:

>Translated_151_residues
MIIMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGP
GSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLYMREHELLK
>Mature_151_residues
MIIMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGP
GSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLYMREHELLK

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family

Homologues:

Organism=Homo sapiens, GI4506609, Length=137, Percent_Identity=40.8759124087591, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17508673, Length=124, Percent_Identity=39.5161290322581, Blast_Score=102, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6319559, Length=142, Percent_Identity=34.5070422535211, Blast_Score=91, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6319444, Length=142, Percent_Identity=34.5070422535211, Blast_Score=91, Evalue=9e-20,
Organism=Drosophila melanogaster, GI45552831, Length=139, Percent_Identity=43.8848920863309, Blast_Score=117, Evalue=2e-27,
Organism=Drosophila melanogaster, GI17136322, Length=139, Percent_Identity=43.8848920863309, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL19_METJA (P54043)

Other databases:

- EMBL:   L77117
- PIR:   A64359
- RefSeq:   NP_247449.1
- ProteinModelPortal:   P54043
- SMR:   P54043
- GeneID:   1451335
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0473
- NMPDR:   fig|243232.1.peg.486
- TIGR:   MJ0473
- HOGENOM:   HBG748852
- OMA:   MAKGGAF
- ProtClustDB:   PRK08570
- BioCyc:   MJAN243232:MJ_0473-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015973
- InterPro:   IPR015974
- Gene3D:   G3DSA:1.10.1650.10
- Gene3D:   G3DSA:1.20.5.560
- Gene3D:   G3DSA:1.10.1200.60

Pfam domain/function: PF01280 Ribosomal_L19e; SSF48140 Ribosomal_L19/L19e

EC number: NA

Molecular weight: Translated: 17630; Mature: 17630

Theoretical pI: Translated: 11.99; Mature: 11.99

Prosite motif: PS00526 RIBOSOMAL_L19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGI
CEEECCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VYRKLYRMAKGGAFRSRSHLFLYMREHELLK
HHHHHHHHHCCCCCCCCCHHEEEEHHHHHCC
>Mature Secondary Structure
MIIMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGI
CEEECCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VYRKLYRMAKGGAFRSRSHLFLYMREHELLK
HHHHHHHHHCCCCCCCCCHHEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087