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The map label for this gene is rpl24p

Identifier: 15668644

GI number: 15668644

Start: 413937

End: 414299

Strand: Direct

Name: rpl24p

Synonym: MJ0467

Alternate gene names: 15668644

Gene position: 413937-414299 (Clockwise)

Preceding gene: 15668643

Following gene: 15668645

Centisome position: 24.86

GC content: 32.78

Gene sequence:

>363_bases
ATGGCTTTTACAAAGTCAAAACAACCAAGAAAACAGAGAAAGGCATTATTTAACGCTCCTCTCCACTTAAGAAGAAAAGT
TATGTCTGCAATGTTATCAAAGGAGTTGAAGGAGAAGTTAGGTAAAAACGCTATCCCAGTTAGAAAAGGAGATGTTGTTA
GAATAATGAGAGGAGATTTCAAAGGATTAGAAGGAGAAGTTATCAAAGTTGATTTAAAGAGATACAGAATATATGTTGAA
GGAGCAAACAACAAGAGACAAGATGGAAGAGAAGTTCCATATCCAATCCATCCATCAAATGTTATGATTATCAAGTTGTA
TGACAAGGATGAAAAAAGATTCAAACATATCAAAAATGAATAA

Upstream 100 bases:

>100_bases
TAAGGGGCCTGTTGCTAAGGAAGCTGCTGAAAGATGGCCAGGTATTGCAAGAATTGCTAAGATAATCATTTAAATTAAAA
ACTAATTAAGGTGAAAAAAC

Downstream 100 bases:

>100_bases
GGTGAAAGGATGGCAAAAAAAGGTCCAAAAAGACATTTAAAAAGATTGGCAGCTCCAGTTAGATGGGAGTTACCAAGAAA
GATTCACAAATTCACAGTTA

Product: 50S ribosomal protein L24P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MAFTKSKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDFKGLEGEVIKVDLKRYRIYVE
GANNKRQDGREVPYPIHPSNVMIIKLYDKDEKRFKHIKNE

Sequences:

>Translated_120_residues
MAFTKSKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDFKGLEGEVIKVDLKRYRIYVE
GANNKRQDGREVPYPIHPSNVMIIKLYDKDEKRFKHIKNE
>Mature_119_residues
AFTKSKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDFKGLEGEVIKVDLKRYRIYVEG
ANNKRQDGREVPYPIHPSNVMIIKLYDKDEKRFKHIKNE

Specific function: Located at the polypeptide exit tunnel on the outside of the subunit

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family

Homologues:

Organism=Homo sapiens, GI4506621, Length=106, Percent_Identity=46.2264150943396, Blast_Score=91, Evalue=2e-19,
Organism=Homo sapiens, GI7705813, Length=106, Percent_Identity=46.2264150943396, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17535693, Length=108, Percent_Identity=45.3703703703704, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17535691, Length=99, Percent_Identity=43.4343434343434, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32564329, Length=91, Percent_Identity=46.1538461538462, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323376, Length=108, Percent_Identity=41.6666666666667, Blast_Score=80, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6321471, Length=108, Percent_Identity=41.6666666666667, Blast_Score=80, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21357853, Length=109, Percent_Identity=44.954128440367, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24_METJA (P54038)

Other databases:

- EMBL:   L77117
- PIR:   C64358
- RefSeq:   NP_247442.1
- ProteinModelPortal:   P54038
- SMR:   P54038
- GeneID:   1451329
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0467
- NMPDR:   fig|243232.1.peg.479
- TIGR:   MJ0467
- HOGENOM:   HBG714769
- OMA:   FLYNAPL
- ProtClustDB:   PRK01191
- BioCyc:   MJAN243232:MJ_0467-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01326_A
- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR005756
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.200
- PANTHER:   PTHR11143
- SMART:   SM00739
- TIGRFAMs:   TIGR01080

Pfam domain/function: PF00467 KOW; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 14103; Mature: 13972

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFTKSKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDF
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
KGLEGEVIKVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMIIKLYDKDEKRFKHIKNE
CCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCC
>Mature Secondary Structure 
AFTKSKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDF
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
KGLEGEVIKVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMIIKLYDKDEKRFKHIKNE
CCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087