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The map label for this gene is rbsK [C]

Identifier: 15668582

GI number: 15668582

Start: 365546

End: 366454

Strand: Direct

Name: rbsK [C]

Synonym: MJ0406

Alternate gene names: 15668582

Gene position: 365546-366454 (Clockwise)

Preceding gene: 15668579

Following gene: 15668583

Centisome position: 21.96

GC content: 34.32

Gene sequence:

>909_bases
TTGGGTGGTAAAATGGAGAAGATTACATGTGTAGGGCATACTGCCCTTGATTATATCTTCAATGTAGAAAAATTTCCAGA
ACCGAATACTTCAATTCAAATTCCTTCGGCGAGAAAGTATTATGGTGGAGCAGCGGCAAATACAGCAGTGGGAATAAAAA
AACTTGGTGTTAATTCAGAGCTTTTATCATGTGTTGGCTATGATTTTAAAAATAGTGGATATGAGAGGTATTTAAAGAAT
TTGGATATAAATATTTCTAAACTTTACTATTCTGAAGAAGAAGAAACACCAAAGGCATGGATATTTACAGACAAGGATAA
CAATCAGATAACTTTCTTTTTATGGGGAGCTGCTAAGCATTATAAGGAACTAAACCCACCAAACTTCAATACAGAAATTG
TCCATATAGCCACTGGAGACCCAGAGTTCAACTTAAAATGTGCAAAAAAAGCTTATGGAAACAATTTGGTCTCTTTCGAC
CCCGGACAGGACTTACCTCAATACTCAAAAGAAATGTTGTTGGAAATTATTGAGCATACAAACTTTTTATTTATGAATAA
ACATGAATTTGAGAGAGCATCTAATTTATTAAATTTTGAAATTGATGATTATTTAGAGAGGGTTGATGCCCTTATAGTAA
CAAAAGGTTCTAAGGGTAGTGTAATATACACTAAAGATAAAAAAATAGAAATTCCTTGTATTAAAGCAGGGAAAGTTATA
GACCCAACAGGTGCTGGAGACAGCTATAGAGCTGGATTTTTATCTGCCTATGTCAAAGGGTATGATTTAGAGAAATGTGG
TTTAATTGGTGCTGCAACTGCCTCATTTGTTGTTGAGGCAAAGGGATGCCAAACTAATTTACCAACATGGGATAAGGTTG
TTGAGAGATTAGAAAAACACCGAATATAA

Upstream 100 bases:

>100_bases
AAACAATTTTTGCTAATCTACTATATAAAGGGTTCAAACAGTTATTGTTCTAATACTTAATGTTCAATTTATTCAAATCA
TTAAGTTATTCTTAAAAATT

Downstream 100 bases:

>100_bases
AATATAATTTTTTGAGGGATGTCTATGGATATAGTAGAAAGAATAAACAAATTAAAAGAAGAAAAAAATGCAGTAATATT
GGCTCACAATTATCAACCAA

Product: ribokinase RbsK

Products: ADP; D-ribose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MGGKMEKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKN
LDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPNFNTEIVHIATGDPEFNLKCAKKAYGNNLVSFD
PGQDLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLNFEIDDYLERVDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVI
DPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGCQTNLPTWDKVVERLEKHRI

Sequences:

>Translated_302_residues
MGGKMEKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKN
LDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPNFNTEIVHIATGDPEFNLKCAKKAYGNNLVSFD
PGQDLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLNFEIDDYLERVDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVI
DPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGCQTNLPTWDKVVERLEKHRI
>Mature_301_residues
GGKMEKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKNL
DINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPNFNTEIVHIATGDPEFNLKCAKKAYGNNLVSFDP
GQDLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLNFEIDDYLERVDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVID
PTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGCQTNLPTWDKVVERLEKHRI

Specific function: Ribose metabolism; first step. [C]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family

Homologues:

Organism=Escherichia coli, GI1790193, Length=313, Percent_Identity=21.0862619808307, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y406_METJA (Q57849)

Other databases:

- EMBL:   L77117
- PIR:   F64350
- RefSeq:   NP_247380.1
- PDB:   2C49
- PDB:   2C4E
- PDBsum:   2C49
- PDBsum:   2C4E
- ProteinModelPortal:   Q57849
- SMR:   Q57849
- GeneID:   1451266
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0406
- NMPDR:   fig|243232.1.peg.417
- TIGR:   MJ0406
- HOGENOM:   HBG539057
- OMA:   FHPGAMS
- ProtClustDB:   CLSK876173
- BioCyc:   MJAN243232:MJ_0406-MONOMER
- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139
- PRINTS:   PR00990

Pfam domain/function: PF00294 PfkB

EC number: 2.7.1.15

Molecular weight: Translated: 33920; Mature: 33789

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00583 PFKB_KINASES_1; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGKMEKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSE
CCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCHHHHHHCCCCCHH
LLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKH
HHHHHCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCHHH
YKELNPPNFNTEIVHIATGDPEFNLKCAKKAYGNNLVSFDPGQDLPQYSKEMLLEIIEHT
HHCCCCCCCCCEEEEEECCCCCCCEEEEHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHC
NFLFMNKHEFERASNLLNFEIDDYLERVDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVI
CEEEEEHHHHHHHHCEECCCHHHHHHHHCEEEEECCCCCCEEEECCCEEEECEECCCCEE
DPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGCQTNLPTWDKVVERLEKH
CCCCCCCCHHHHHHHHHHCCCCCHHCCEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHC
RI
CC
>Mature Secondary Structure 
GGKMEKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSE
CCCCEEEEEECHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCHHHHHHCCCCCHH
LLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKH
HHHHHCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCHHH
YKELNPPNFNTEIVHIATGDPEFNLKCAKKAYGNNLVSFDPGQDLPQYSKEMLLEIIEHT
HHCCCCCCCCCEEEEEECCCCCCCEEEEHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHC
NFLFMNKHEFERASNLLNFEIDDYLERVDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVI
CEEEEEHHHHHHHHCEECCCHHHHHHHHCEEEEECCCCCCEEEECCCEEEECEECCCCEE
DPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGCQTNLPTWDKVVERLEKH
CCCCCCCCHHHHHHHHHHCCCCCHHCCEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHC
RI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-ribose

Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087