| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668581
Identifier: 15668581
GI number: 15668581
Start: 364996
End: 365391
Strand: Reverse
Name: 15668581
Synonym: MJ0405
Alternate gene names: NA
Gene position: 365391-364996 (Counterclockwise)
Preceding gene: 15668588
Following gene: 15668580
Centisome position: 21.95
GC content: 34.85
Gene sequence:
>396_bases GTGAAAATTATGATAACCATATCTGAAAATTCTGAAGCAAAGGAATTAATGCCTATTGCTCAGGCTGTCCATATATTGGT TAATAAACTCCCTGTTGCTATGAGAAGCAAAAACAAGCCTGGAGTTAGGTTGGAAAAAGGGGAGGTTGTAGATACGAATT ACGAAGGTTATGTTTTAAAAGTAGCTATTGAAAAAGGTGAAGTTGTTAGAGCTACACCTATTATAGGCCCTTATGCAGGA CTTCCTGTTATAGTGGCTCCAATAAAAGATGGAGATAATGTTTTAGGAGCTATTGGTGTAGTTGATATAACAGCTGGAAT ATTTGAAGATATTGTGGCTATTTCAAGAAGACCTGAATTATACAAATTTTTACCAGAAGATGCATTTCCAAAATAA
Upstream 100 bases:
>100_bases AATAACTGTTTGAACCCTTTATATAGTAGATTAGCAAAAATTGTTTATATAGAGTAACTTTAAAGTTAAAATTATTGAAC TACTACTTAAAGATTTTTAG
Downstream 100 bases:
>100_bases AAAATGTTAATTATTAATACTTCGCAAAAATATTGGACATTAATTGGGGCTGAAAAGCCCCAACTTGATGGACGTGTGGT ATAGCAATAGGAGGTATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MKIMITISENSEAKELMPIAQAVHILVNKLPVAMRSKNKPGVRLEKGEVVDTNYEGYVLKVAIEKGEVVRATPIIGPYAG LPVIVAPIKDGDNVLGAIGVVDITAGIFEDIVAISRRPELYKFLPEDAFPK
Sequences:
>Translated_131_residues MKIMITISENSEAKELMPIAQAVHILVNKLPVAMRSKNKPGVRLEKGEVVDTNYEGYVLKVAIEKGEVVRATPIIGPYAG LPVIVAPIKDGDNVLGAIGVVDITAGIFEDIVAISRRPELYKFLPEDAFPK >Mature_131_residues MKIMITISENSEAKELMPIAQAVHILVNKLPVAMRSKNKPGVRLEKGEVVDTNYEGYVLKVAIEKGEVVRATPIIGPYAG LPVIVAPIKDGDNVLGAIGVVDITAGIFEDIVAISRRPELYKFLPEDAFPK
Specific function: Unknown
COG id: COG4048
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y405_METJA (Q57848)
Other databases:
- EMBL: L77117 - PIR: E64350 - RefSeq: NP_247379.1 - ProteinModelPortal: Q57848 - GeneID: 1451265 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0405 - NMPDR: fig|243232.1.peg.416 - TIGR: MJ0405 - HOGENOM: HBG539056 - OMA: DKPGVRI - ProtClustDB: CLSK876172 - BioCyc: MJAN243232:MJ_0405-MONOMER - InterPro: IPR012029 - PIRSF: PIRSF006557
Pfam domain/function: PF09884 DUF2111
EC number: NA
Molecular weight: Translated: 14224; Mature: 14224
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xcc6cbb0)-; HASH(0xc534abc)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIMITISENSEAKELMPIAQAVHILVNKLPVAMRSKNKPGVRLEKGEVVDTNYEGYVLK CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCEEECCCCCEEEE VAIEKGEVVRATPIIGPYAGLPVIVAPIKDGDNVLGAIGVVDITAGIFEDIVAISRRPEL EEECCCCEEEECCCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHH YKFLPEDAFPK HHCCCCCCCCH >Mature Secondary Structure MKIMITISENSEAKELMPIAQAVHILVNKLPVAMRSKNKPGVRLEKGEVVDTNYEGYVLK CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCEEECCCCCEEEE VAIEKGEVVRATPIIGPYAGLPVIVAPIKDGDNVLGAIGVVDITAGIFEDIVAISRRPEL EEECCCCEEEECCCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHH YKFLPEDAFPK HHCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087