Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668580

Identifier: 15668580

GI number: 15668580

Start: 364349

End: 364801

Strand: Reverse

Name: 15668580

Synonym: MJ0404

Alternate gene names: NA

Gene position: 364801-364349 (Counterclockwise)

Preceding gene: 15668581

Following gene: 15668578

Centisome position: 21.91

GC content: 34.22

Gene sequence:

>453_bases
ATGAAAAAAATATTCATATACCCACCAAATAGCTTAATTCTAACAGATTTGGTTGAGAGATTTGGACACAAGCCTTTAAA
CTTGAATATAGTTATAGGAAAATTAGTCAGAAATCCTGAAATAGACAGCCCACCAATGAATATAACAGACGAAGAGCCTA
AGAAAGGTTTGAAGTATGCGGCTGTGGAAGTTCCTTCTGGTGTTAGAGGAAGGATGGCTTTAATTGGGCCATTAATTGAA
GAGGCAGAGGCAGCGATAATAATGGATGATGCACCAATAGCCTTTGGATGTATTGGCTGCCAAAGAACAAATGAACTAAC
TCTATATTTAGTTAGAAGGAAAAATATCCCAATATTAAGAGTTAAATATCCAACAAATGAAGAAGAGGCGGAAATTTTAG
TTAATAAGATAGCAAACTTCTTAAAGAGCTTAGAAGAAAATCAAGAAAATTAA

Upstream 100 bases:

>100_bases
TATCCTCCTATGCTTGTATAAGTTTTTACCAGAAGATGCATTTCCAAAATAATAATTATATCCCTTTTATGCTTGTAAAA
TAAACTTTTAAGGTGATAGA

Downstream 100 bases:

>100_bases
AAATTTGGTGATAAGATGGAATGTCCAAATAAAGAAATCAACTTAAAAAGATGCAACTGTAGTTACCCAGCTTGTTCTAA
AAAAGGAATGTGTTGTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKKIFIYPPNSLILTDLVERFGHKPLNLNIVIGKLVRNPEIDSPPMNITDEEPKKGLKYAAVEVPSGVRGRMALIGPLIE
EAEAAIIMDDAPIAFGCIGCQRTNELTLYLVRRKNIPILRVKYPTNEEEAEILVNKIANFLKSLEENQEN

Sequences:

>Translated_150_residues
MKKIFIYPPNSLILTDLVERFGHKPLNLNIVIGKLVRNPEIDSPPMNITDEEPKKGLKYAAVEVPSGVRGRMALIGPLIE
EAEAAIIMDDAPIAFGCIGCQRTNELTLYLVRRKNIPILRVKYPTNEEEAEILVNKIANFLKSLEENQEN
>Mature_150_residues
MKKIFIYPPNSLILTDLVERFGHKPLNLNIVIGKLVRNPEIDSPPMNITDEEPKKGLKYAAVEVPSGVRGRMALIGPLIE
EAEAAIIMDDAPIAFGCIGCQRTNELTLYLVRRKNIPILRVKYPTNEEEAEILVNKIANFLKSLEENQEN

Specific function: Unknown

COG id: COG4050

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y404_METJA (Q57847)

Other databases:

- EMBL:   L77117
- PIR:   D64350
- RefSeq:   NP_247378.1
- GeneID:   1451264
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0404
- NMPDR:   fig|243232.1.peg.415
- TIGR:   MJ0404
- HOGENOM:   HBG551265
- OMA:   SGVRGRM
- ProtClustDB:   CLSK876171
- BioCyc:   MJAN243232:MJ_0404-MONOMER
- InterPro:   IPR012356
- PIRSF:   PIRSF018781
- TIGRFAMs:   TIGR03271

Pfam domain/function: PF09885 DUF2112

EC number: NA

Molecular weight: Translated: 16867; Mature: 16867

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFIYPPNSLILTDLVERFGHKPLNLNIVIGKLVRNPEIDSPPMNITDEEPKKGLKYA
CCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
AVEVPSGVRGRMALIGPLIEEAEAAIIMDDAPIAFGCIGCQRTNELTLYLVRRKNIPILR
EEECCCCCCCCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCEEEEEEEECCCCEEE
VKYPTNEEEAEILVNKIANFLKSLEENQEN
EECCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKIFIYPPNSLILTDLVERFGHKPLNLNIVIGKLVRNPEIDSPPMNITDEEPKKGLKYA
CCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
AVEVPSGVRGRMALIGPLIEEAEAAIIMDDAPIAFGCIGCQRTNELTLYLVRRKNIPILR
EEECCCCCCCCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCEEEEEEEECCCCEEE
VKYPTNEEEAEILVNKIANFLKSLEENQEN
EECCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087