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The map label for this gene is 15668558

Identifier: 15668558

GI number: 15668558

Start: 346946

End: 347683

Strand: Direct

Name: 15668558

Synonym: MJ0382

Alternate gene names: NA

Gene position: 346946-347683 (Clockwise)

Preceding gene: 15668557

Following gene: 15668559

Centisome position: 20.84

GC content: 32.25

Gene sequence:

>738_bases
TTGATTATGGAGGCTTTAGTAGCTCTCCTCCGATTTCCATTCTATTCTTTTGGAAAACAGTCTTATCAAGTTAGACAATC
TTTGCTATTACCATCTCCATCAGCATTAAAAGGGGCATTAGCTAAGGGAATTATATTGCTTGGTGGAAAAAAAGGAAAGA
GTTTAGATGAAATTGCTAAAAAAACTGTTGAAGAATTGGAAAATAAGCTCATCTATGTCGGAGCAAAGCCATACAAAAGT
AGTATCATAAAAACCCCAATTCTACTAAAGAGACTTAGAAACTTAGAAGATCAAAAAAATCCAGAAAAAAGTGACGCAAT
GAGAAGAGAATATGTATTTGCAAGGGAGATTTTAGCTATTTATGTTTTTAGGAGAAAGTTGAGTGAAGAAGAAAAAGATC
TAATGCTTAAGGCAGTTTATTTAATTGACCAGCTCGGAGATACTGAGTGTGTGGGAAATGTGATTAAAACTGAATGGGTT
GAAGTAAAAGAAGAAAAAGCTCCTCTAAAAACCTATGTGAAGTTTAAAAAAGTATCAAAAATGAGCATAAATGGAGGTAT
TATTGAAAATATGCTTGAAACTCCAAATTTTGGAAATAAAGTAAAAGAAGAGCCGTATTTACTACCACTTATTGAAAAAC
GTTATAGAAGAAGCTCATATTACGTTGAATCAGATAGAATTTTTGACGGAAATTACAAAATTATTGCCTTTGATGAGGTG
ATTGGGTTATGGATATAA

Upstream 100 bases:

>100_bases
TGAGATTGAGGATTTCGGATACAATGTAGATTTTGGTGAGAGCGTTTCATCAGTTGAAGAGCTAATCTCAAAAATAATAG
AGAAATTATAAATTGAGGGG

Downstream 100 bases:

>100_bases
TTAATTTTTTTAAACAAATTACAGATCATGAGCCTTATGATTATCAAATTAGGGCATGGGAAAAGATTAATAAAATTATG
GAACTTGGGGGGAGGGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MIMEALVALLRFPFYSFGKQSYQVRQSLLLPSPSALKGALAKGIILLGGKKGKSLDEIAKKTVEELENKLIYVGAKPYKS
SIIKTPILLKRLRNLEDQKNPEKSDAMRREYVFAREILAIYVFRRKLSEEEKDLMLKAVYLIDQLGDTECVGNVIKTEWV
EVKEEKAPLKTYVKFKKVSKMSINGGIIENMLETPNFGNKVKEEPYLLPLIEKRYRRSSYYVESDRIFDGNYKIIAFDEV
IGLWI

Sequences:

>Translated_245_residues
MIMEALVALLRFPFYSFGKQSYQVRQSLLLPSPSALKGALAKGIILLGGKKGKSLDEIAKKTVEELENKLIYVGAKPYKS
SIIKTPILLKRLRNLEDQKNPEKSDAMRREYVFAREILAIYVFRRKLSEEEKDLMLKAVYLIDQLGDTECVGNVIKTEWV
EVKEEKAPLKTYVKFKKVSKMSINGGIIENMLETPNFGNKVKEEPYLLPLIEKRYRRSSYYVESDRIFDGNYKIIAFDEV
IGLWI
>Mature_245_residues
MIMEALVALLRFPFYSFGKQSYQVRQSLLLPSPSALKGALAKGIILLGGKKGKSLDEIAKKTVEELENKLIYVGAKPYKS
SIIKTPILLKRLRNLEDQKNPEKSDAMRREYVFAREILAIYVFRRKLSEEEKDLMLKAVYLIDQLGDTECVGNVIKTEWV
EVKEEKAPLKTYVKFKKVSKMSINGGIIENMLETPNFGNKVKEEPYLLPLIEKRYRRSSYYVESDRIFDGNYKIIAFDEV
IGLWI

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y382_METJA (Q57827)

Other databases:

- EMBL:   L77117
- PIR:   F64347
- RefSeq:   NP_247356.1
- ProteinModelPortal:   Q57827
- GeneID:   1451239
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0382
- NMPDR:   fig|243232.1.peg.393
- TIGR:   MJ0382
- HOGENOM:   HBG539053
- OMA:   MRREYVF
- ProtClustDB:   CLSK213991
- BioCyc:   MJAN243232:MJ_0382-MONOMER
- InterPro:   IPR021124
- InterPro:   IPR013422
- InterPro:   IPR010153
- TIGRFAMs:   TIGR01874
- TIGRFAMs:   TIGR02593

Pfam domain/function: PF09704 Cas_Cas5d

EC number: NA

Molecular weight: Translated: 28256; Mature: 28256

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMEALVALLRFPFYSFGKQSYQVRQSLLLPSPSALKGALAKGIILLGGKKGKSLDEIAK
CHHHHHHHHHHCCHHHHCHHHHHHHHHHCCCCCHHHHHHHHCCEEEECCCCCCCHHHHHH
KTVEELENKLIYVGAKPYKSSIIKTPILLKRLRNLEDQKNPEKSDAMRREYVFAREILAI
HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHH
YVFRRKLSEEEKDLMLKAVYLIDQLGDTECVGNVIKTEWVEVKEEKAPLKTYVKFKKVSK
HHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MSINGGIIENMLETPNFGNKVKEEPYLLPLIEKRYRRSSYYVESDRIFDGNYKIIAFDEV
HCCCCHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHCCEEECCEEECCCEEEEEEHHH
IGLWI
HHHCC
>Mature Secondary Structure
MIMEALVALLRFPFYSFGKQSYQVRQSLLLPSPSALKGALAKGIILLGGKKGKSLDEIAK
CHHHHHHHHHHCCHHHHCHHHHHHHHHHCCCCCHHHHHHHHCCEEEECCCCCCCHHHHHH
KTVEELENKLIYVGAKPYKSSIIKTPILLKRLRNLEDQKNPEKSDAMRREYVFAREILAI
HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHH
YVFRRKLSEEEKDLMLKAVYLIDQLGDTECVGNVIKTEWVEVKEEKAPLKTYVKFKKVSK
HHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MSINGGIIENMLETPNFGNKVKEEPYLLPLIEKRYRRSSYYVESDRIFDGNYKIIAFDEV
HCCCCHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHCCEEECCEEECCCEEEEEEHHH
IGLWI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087