Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668551

Identifier: 15668551

GI number: 15668551

Start: 339917

End: 340681

Strand: Direct

Name: 15668551

Synonym: MJ0375

Alternate gene names: NA

Gene position: 339917-340681 (Clockwise)

Preceding gene: 15668549

Following gene: 15668552

Centisome position: 20.42

GC content: 29.02

Gene sequence:

>765_bases
ATGAGGGAGAGTATGAGAATTGAGTTAGAGTTACAGACAGACAACTTCACAGTAATTCCTTATAATCATCAGTATTATTT
GGCATCAGCCATATACAATAAAATTCACTCTGCAAATCCTGCCTATGCTAAAAGATTACATAATTATCAGAAGTTTAAGT
TCTTTACTTTTTCTTTATTGCAGATTAGAAAGAGGGTTATTAGAAAGGAAGGGATTGAAACTATAGATGGGAAGGCATAT
CTCTATATATCCTCACCAAACAATGAGTTTATTGAGAATTTTGTTGCTGGACTCTTAGAGGATGGAAAGTTGAGAGTAGG
AAATGTTGAATTCTTTGTAAGAAAGGCTAAAATTCTACCAATTCCAAAGAAATTCAATATATTAAAAACCATATCTCCAA
TTTACTTAAAGACGATGATTGAGACAGAAGATGGTTTAAAAACTTATGATTTATTACCAAACAATTCTAAATTTTATGAA
AACTTAAAGAATAATCTAAAAAAGAAATATGAAGCATTCTATAATGAAAAATGTGACATGAACTTTGAATTTGAAGTCTT
AAAATTTAGACCTAAAAGGATGAGAATAAAAAATGATATTTATTGTAGGTGTTCTGAAATGGTGTTTAAGGTCTGGGGGG
ACTACGATTTAATAAAATTTGGTTATGAGTGTGGTTTTGGAGAGAAGAATAGTATGGGTTTTGGAATGGTTGTAAATGTT
GAAGATAAAAATCAAAAAAATAAAAAACTCAAAACAAAAATTTAA

Upstream 100 bases:

>100_bases
ATTTACAAGATATTCAGCCATAGCGTATAAATCCATATAACCACCAGATATCATTAATTTCCTAAGGTTAATAAAGTGTT
ATTGTTTATTTAAATATTTT

Downstream 100 bases:

>100_bases
TTGTGGCTAATAATTGTTAATATCTCCTATTTACTTTTTCATTATTGCATAAAAACGTGTTAAACAAAATCATTTATTAA
TCATACTACATAACTCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MRESMRIELELQTDNFTVIPYNHQYYLASAIYNKIHSANPAYAKRLHNYQKFKFFTFSLLQIRKRVIRKEGIETIDGKAY
LYISSPNNEFIENFVAGLLEDGKLRVGNVEFFVRKAKILPIPKKFNILKTISPIYLKTMIETEDGLKTYDLLPNNSKFYE
NLKNNLKKKYEAFYNEKCDMNFEFEVLKFRPKRMRIKNDIYCRCSEMVFKVWGDYDLIKFGYECGFGEKNSMGFGMVVNV
EDKNQKNKKLKTKI

Sequences:

>Translated_254_residues
MRESMRIELELQTDNFTVIPYNHQYYLASAIYNKIHSANPAYAKRLHNYQKFKFFTFSLLQIRKRVIRKEGIETIDGKAY
LYISSPNNEFIENFVAGLLEDGKLRVGNVEFFVRKAKILPIPKKFNILKTISPIYLKTMIETEDGLKTYDLLPNNSKFYE
NLKNNLKKKYEAFYNEKCDMNFEFEVLKFRPKRMRIKNDIYCRCSEMVFKVWGDYDLIKFGYECGFGEKNSMGFGMVVNV
EDKNQKNKKLKTKI
>Mature_254_residues
MRESMRIELELQTDNFTVIPYNHQYYLASAIYNKIHSANPAYAKRLHNYQKFKFFTFSLLQIRKRVIRKEGIETIDGKAY
LYISSPNNEFIENFVAGLLEDGKLRVGNVEFFVRKAKILPIPKKFNILKTISPIYLKTMIETEDGLKTYDLLPNNSKFYE
NLKNNLKKKYEAFYNEKCDMNFEFEVLKFRPKRMRIKNDIYCRCSEMVFKVWGDYDLIKFGYECGFGEKNSMGFGMVVNV
EDKNQKNKKLKTKI

Specific function: Unknown

COG id: COG1583

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y375_METJA (Q57820)

Other databases:

- EMBL:   L77117
- PIR:   G64346
- RefSeq:   NP_247349.1
- GeneID:   1451232
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0375
- NMPDR:   fig|243232.1.peg.386
- TIGR:   MJ0375
- HOGENOM:   HBG645581
- OMA:   NSQGFGL
- ProtClustDB:   CLSK2517601
- BioCyc:   MJAN243232:MJ_0375-MONOMER
- InterPro:   IPR010156
- InterPro:   IPR002743
- TIGRFAMs:   TIGR01877

Pfam domain/function: PF01881 DUF57

EC number: NA

Molecular weight: Translated: 30185; Mature: 30185

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESMRIELELQTDNFTVIPYNHQYYLASAIYNKIHSANPAYAKRLHNYQKFKFFTFSLL
CCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHH
QIRKRVIRKEGIETIDGKAYLYISSPNNEFIENFVAGLLEDGKLRVGNVEFFVRKAKILP
HHHHHHHHHCCCCEECCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEEC
IPKKFNILKTISPIYLKTMIETEDGLKTYDLLPNNSKFYENLKNNLKKKYEAFYNEKCDM
CCCCCCHHHHCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
NFEFEVLKFRPKRMRIKNDIYCRCSEMVFKVWGDYDLIKFGYECGFGEKNSMGFGMVVNV
CEEEEEEEECCHHHCCCCCCEEEHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEE
EDKNQKNKKLKTKI
CCCCCCCCCCCCCC
>Mature Secondary Structure
MRESMRIELELQTDNFTVIPYNHQYYLASAIYNKIHSANPAYAKRLHNYQKFKFFTFSLL
CCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHH
QIRKRVIRKEGIETIDGKAYLYISSPNNEFIENFVAGLLEDGKLRVGNVEFFVRKAKILP
HHHHHHHHHCCCCEECCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEEC
IPKKFNILKTISPIYLKTMIETEDGLKTYDLLPNNSKFYENLKNNLKKKYEAFYNEKCDM
CCCCCCHHHHCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
NFEFEVLKFRPKRMRIKNDIYCRCSEMVFKVWGDYDLIKFGYECGFGEKNSMGFGMVVNV
CEEEEEEEECCHHHCCCCCCEEEHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEE
EDKNQKNKKLKTKI
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087