| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668504
Identifier: 15668504
GI number: 15668504
Start: 306614
End: 308263
Strand: Reverse
Name: 15668504
Synonym: MJ0330
Alternate gene names: NA
Gene position: 308263-306614 (Counterclockwise)
Preceding gene: 15668505
Following gene: 15668503
Centisome position: 18.51
GC content: 33.64
Gene sequence:
>1650_bases ATGATGTATATCGTCGAATTAGTGAGAGAATCTCTCAAAAAGAAAACTTTCAATAAAAAAATATTTTTAGAACTCTGCAA AAAGTTAGATATTCCCATACCTCAAAAACTGAATAAACATAACTTCCCTCCGCTATTCTATGAGTTAATTGACAAATTAA AATCATTAAATATTATAGAATTCTGTGAAATAACAATGGATTTGCACACAATAACCGAAAAACAGAAAGAAATATTACTC AATATGGTTGAACATCCCATTAATATATTGATTATTGGAAAAGGTGGCGGTAAGGACTTCATGGTTTCATTATTGTTCAA TTATATGATGTTCCGAGCTTGTGTAGAAGATTATTATGAAAAATTCACAAGAATTGATTTTGTTAATGTTGCCCCCAATG ACCATTTAGCAAAGAATGTTTTTTTCAAAGAGTTTAAAGCATGGTTTCTTAAATGCAAAGTATGGCAAATGATAGGGATA GATAAGAAAAAAAGACAAAAAGCCCCTATATGTGTATTGGAAACAAAAGCAGAGATAGGAGATAAAATAACAATGCACTC AGGTCACTCAAGAGCAACATCATTTGAAGGGATGAATGCCCTATGCGTTGTAGCTGATGAGATAAGCGACCCAGATTTTA AAAATGCAGAGCAATTATTTGAACAAGGGTTAAGTTCTGCAAAGTCAAGATTCAAAGATAAAGCAAGAGTCGTAGCAATC ACATGGACAAGATTTCCAACTCCAAATCCGAGAGATGACGTAGGATATAGATTATATCTTGATTATAAGGCAGTCGATGA GGCATATACATTCAAAGGGAAAACATGGGAAGTGAATACAAGGGTTTCAAAAGAAGACTTTAAAGCACAATACCAAAAGA ACCCAATCCTTGCAAGATGTATGTATGAATGCGAACCTCCTGAATTGAACGCTTATTTCATCAGTTTAGAAGCTCTGGAA GCAAGGCATAAAGTGGAAATGGGATTATTCACATGGAGGGCAATTTATGAAAACAATTTGATAAGATTGGAGTTTAAACA ACTTCAAAGCACAGATAAAACCATTTACTGCCATACTGACCTTGCGATTAACAGAGATAAGGGCGTAATTGCGATAAGTT ATTTCGATAAAGGGAAGGTTATAATTTCAGACATTATTGTTCTTACTCCAACGCTTGGACATAAGATTGATTATTTAAGT TTAGAGAAGTTTTACAATCATTTACAAAACCATTTTTCAGTTAAATTCACATTTGACAGATTCCAAAGTGAATATTTTAT ACAAAAATTCAAAGGTGAAAGGCTATCTAAACACGTCAAACTATGGACAACATTCCAAGAACTCGTAGAAGGGACAAAAG AATACTATGATGCAACTGGTGTAAAACGGAAAAAAGCAAAAATCGAAATTCGATGCAATGAAGATATTTGGCAAAAACTA AGAACTCAAATCCTCCAACACCAAATAGATGGGGATAAAGTAATCTATTTCGGTGAAGGTAGTCCTGACTTAGCAGATGC TGTTGTCTCAAGTGCCTATAATTGCATTACCCACAATGTGAATGCAATTGATGAAGAGGATTACTCATACCGCCAAGTGT TTGACGATGAAGAAGAATTTGAGGAATTTGAGTTTGGAAGTTTCTTTTAA
Upstream 100 bases:
>100_bases AGAAAAAGAACATTCCAGCAAGACCATTTATACAGCCCGCATTGAAAAAAGTCCAAAAAGATTTACCGAAAATCGTGGAA AAAGTCATTAAAAGGATGAG
Downstream 100 bases:
>100_bases GGTGATACTATGGAAGATGATAAAATTCAAATGGAGACTGTTAGTATTGACTTAGCAAAAGATACTGCTGTAAATATGGC ATTGAGAATCTTATTCACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MMYIVELVRESLKKKTFNKKIFLELCKKLDIPIPQKLNKHNFPPLFYELIDKLKSLNIIEFCEITMDLHTITEKQKEILL NMVEHPINILIIGKGGGKDFMVSLLFNYMMFRACVEDYYEKFTRIDFVNVAPNDHLAKNVFFKEFKAWFLKCKVWQMIGI DKKKRQKAPICVLETKAEIGDKITMHSGHSRATSFEGMNALCVVADEISDPDFKNAEQLFEQGLSSAKSRFKDKARVVAI TWTRFPTPNPRDDVGYRLYLDYKAVDEAYTFKGKTWEVNTRVSKEDFKAQYQKNPILARCMYECEPPELNAYFISLEALE ARHKVEMGLFTWRAIYENNLIRLEFKQLQSTDKTIYCHTDLAINRDKGVIAISYFDKGKVIISDIIVLTPTLGHKIDYLS LEKFYNHLQNHFSVKFTFDRFQSEYFIQKFKGERLSKHVKLWTTFQELVEGTKEYYDATGVKRKKAKIEIRCNEDIWQKL RTQILQHQIDGDKVIYFGEGSPDLADAVVSSAYNCITHNVNAIDEEDYSYRQVFDDEEEFEEFEFGSFF
Sequences:
>Translated_549_residues MMYIVELVRESLKKKTFNKKIFLELCKKLDIPIPQKLNKHNFPPLFYELIDKLKSLNIIEFCEITMDLHTITEKQKEILL NMVEHPINILIIGKGGGKDFMVSLLFNYMMFRACVEDYYEKFTRIDFVNVAPNDHLAKNVFFKEFKAWFLKCKVWQMIGI DKKKRQKAPICVLETKAEIGDKITMHSGHSRATSFEGMNALCVVADEISDPDFKNAEQLFEQGLSSAKSRFKDKARVVAI TWTRFPTPNPRDDVGYRLYLDYKAVDEAYTFKGKTWEVNTRVSKEDFKAQYQKNPILARCMYECEPPELNAYFISLEALE ARHKVEMGLFTWRAIYENNLIRLEFKQLQSTDKTIYCHTDLAINRDKGVIAISYFDKGKVIISDIIVLTPTLGHKIDYLS LEKFYNHLQNHFSVKFTFDRFQSEYFIQKFKGERLSKHVKLWTTFQELVEGTKEYYDATGVKRKKAKIEIRCNEDIWQKL RTQILQHQIDGDKVIYFGEGSPDLADAVVSSAYNCITHNVNAIDEEDYSYRQVFDDEEEFEEFEFGSFF >Mature_549_residues MMYIVELVRESLKKKTFNKKIFLELCKKLDIPIPQKLNKHNFPPLFYELIDKLKSLNIIEFCEITMDLHTITEKQKEILL NMVEHPINILIIGKGGGKDFMVSLLFNYMMFRACVEDYYEKFTRIDFVNVAPNDHLAKNVFFKEFKAWFLKCKVWQMIGI DKKKRQKAPICVLETKAEIGDKITMHSGHSRATSFEGMNALCVVADEISDPDFKNAEQLFEQGLSSAKSRFKDKARVVAI TWTRFPTPNPRDDVGYRLYLDYKAVDEAYTFKGKTWEVNTRVSKEDFKAQYQKNPILARCMYECEPPELNAYFISLEALE ARHKVEMGLFTWRAIYENNLIRLEFKQLQSTDKTIYCHTDLAINRDKGVIAISYFDKGKVIISDIIVLTPTLGHKIDYLS LEKFYNHLQNHFSVKFTFDRFQSEYFIQKFKGERLSKHVKLWTTFQELVEGTKEYYDATGVKRKKAKIEIRCNEDIWQKL RTQILQHQIDGDKVIYFGEGSPDLADAVVSSAYNCITHNVNAIDEEDYSYRQVFDDEEEFEEFEFGSFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y330_METJA (Q57776)
Other databases:
- EMBL: L77117 - PIR: B64341 - RefSeq: NP_247302.1 - GeneID: 1451185 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0330 - NMPDR: fig|243232.1.peg.339 - TIGR: MJ0330 - OMA: MYECEPP - ProtClustDB: CLSK2517574 - BioCyc: MJAN243232:MJ_0330-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64472; Mature: 64472
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMYIVELVRESLKKKTFNKKIFLELCKKLDIPIPQKLNKHNFPPLFYELIDKLKSLNIIE CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH FCEITMDLHTITEKQKEILLNMVEHPINILIIGKGGGKDFMVSLLFNYMMFRACVEDYYE HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH KFTRIDFVNVAPNDHLAKNVFFKEFKAWFLKCKVWQMIGIDKKKRQKAPICVLETKAEIG HHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECHHHCC DKITMHSGHSRATSFEGMNALCVVADEISDPDFKNAEQLFEQGLSSAKSRFKDKARVVAI CEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE TWTRFPTPNPRDDVGYRLYLDYKAVDEAYTFKGKTWEVNTRVSKEDFKAQYQKNPILARC EEEECCCCCCCCCCCEEEEEEEEECCCCEEECCCEEEECCCCCHHHHHHHHHCCCCHHHH MYECEPPELNAYFISLEALEARHKVEMGLFTWRAIYENNLIRLEFKQLQSTDKTIYCHTD HHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCEEEEEEC LAINRDKGVIAISYFDKGKVIISDIIVLTPTLGHKIDYLSLEKFYNHLQNHFSVKFTFDR EEEECCCCEEEEEEECCCCEEEEHHHEECCCCCCCCCCEEHHHHHHHHHHCEEEEEEHHH FQSEYFIQKFKGERLSKHVKLWTTFQELVEGTKEYYDATGVKRKKAKIEIRCNEDIWQKL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEEEECHHHHHHH RTQILQHQIDGDKVIYFGEGSPDLADAVVSSAYNCITHNVNAIDEEDYSYRQVFDDEEEF HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHH EEFEFGSFF HHCCCCCCC >Mature Secondary Structure MMYIVELVRESLKKKTFNKKIFLELCKKLDIPIPQKLNKHNFPPLFYELIDKLKSLNIIE CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH FCEITMDLHTITEKQKEILLNMVEHPINILIIGKGGGKDFMVSLLFNYMMFRACVEDYYE HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH KFTRIDFVNVAPNDHLAKNVFFKEFKAWFLKCKVWQMIGIDKKKRQKAPICVLETKAEIG HHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECHHHCC DKITMHSGHSRATSFEGMNALCVVADEISDPDFKNAEQLFEQGLSSAKSRFKDKARVVAI CEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE TWTRFPTPNPRDDVGYRLYLDYKAVDEAYTFKGKTWEVNTRVSKEDFKAQYQKNPILARC EEEECCCCCCCCCCCEEEEEEEEECCCCEEECCCEEEECCCCCHHHHHHHHHCCCCHHHH MYECEPPELNAYFISLEALEARHKVEMGLFTWRAIYENNLIRLEFKQLQSTDKTIYCHTD HHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCEEEEEEC LAINRDKGVIAISYFDKGKVIISDIIVLTPTLGHKIDYLSLEKFYNHLQNHFSVKFTFDR EEEECCCCEEEEEEECCCCEEEEHHHEECCCCCCCCCCEEHHHHHHHHHHCEEEEEEHHH FQSEYFIQKFKGERLSKHVKLWTTFQELVEGTKEYYDATGVKRKKAKIEIRCNEDIWQKL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEEEECHHHHHHH RTQILQHQIDGDKVIYFGEGSPDLADAVVSSAYNCITHNVNAIDEEDYSYRQVFDDEEEF HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHH EEFEFGSFF HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087