Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668503

Identifier: 15668503

GI number: 15668503

Start: 304754

End: 306604

Strand: Reverse

Name: 15668503

Synonym: MJ0329

Alternate gene names: NA

Gene position: 306604-304754 (Counterclockwise)

Preceding gene: 15668504

Following gene: 15668502

Centisome position: 18.41

GC content: 35.39

Gene sequence:

>1851_bases
ATGGAAGATGATAAAATTCAAATGGAGACTGTTAGTATTGACTTAGCAAAAGATACTGCTGTAAATATGGCATTGAGAAT
CTTATTCACTCAAATCTTTACACCATACTCAATAGTATCAATTGATGGGAAGCAACTATCCAAAGATGTAATTGATGAGA
TTTCAGGACTGATTGATAGACACATAAGGGACTTACAATTAGCATTTTCTGATTTTTTACTGAAAGGAAAATGCTACCTC
TACAAATTGCATTACATCAATCCGAATTCAATGAACTTTAAGGAAAGGAAACATTGGAATCCACAAAAAGGAAGATATGA
GTATTGCATCACATACACAATTAAAAGGAATAATGCCGAAAGATGGTGGGAAGTTGATACAGAAGAGGATGTTAGGGTTG
TAATTGCACCAATGGAGCTAAGACAACACTTTCCTGCGGATGTTGAATTTTATGATGAAAAGTATTTGGGAGTATATTAC
AATCCAATACCAATACATGAAACAATCCAAGAGATTGCAGACCAAAAAAACACACTTGCTTTAAAAGTATTGCCACTCAT
GGTTCAGAAAACCCTAATCCCAACAATTATAGGGATTACTCAAAACACTAAAGCAGGAGAGATAATAAAAAAGGCACTAT
CAAATCACCAAAATAGAACCAGAGTATATATTCCTGCAACTCCTGATGAAGTAAAATTTGAAACAATAAGCATAGGAAAA
GACATCCCAACTGATTTGATAGAAACAATGCTGTATTACTATGACAGTGCCATATTCATGGGATTGGGGACTTCAATTAG
TATTGTAAAAGCATCTGGGCAGGAGCTCACAACATCAAGGACTGTAGATAGGAACATATTAAGAATTGTTCAAGGGTATC
AGCAGGAAATTGAAAGATGGATTGCAGACCAGTTAGAAAAAATGGGATACAAAGGCATCTGGGTTAAATTTGCGAATCCA
GACCCTGACTGGGAAATTAATATGTTGCAAAAAGCAAAAATGGTTGCAGAATTAAAGGCACAAGAACAGGTAGCCAAATA
TGACTTCAGTGCATTGATTGAAAGAATCTTCCCAAGCAATGAATTTGGAGAAATACTTGCGGCATATCCTGATTTAACTG
AAAAAGAAGTTGAGAAGCTATTGAAAATGGCAAAAGAGGGTAAAGGAGGTTTAGAATACGCAGATGAAGAAAAACAAAAA
TTATTAGAAAAAAAGCGTAAAAGTTTGGAAAAAATAATCAGCAAATTAGAAAAAGTGGGAGATAAGTTCGGCAAAAAATC
AATGGAAAATTTTGTAAATTGGATACTTGAAACGTATGAAAGGCTTGGATATAACGAACTTATGCAAGATTGGGATGAAT
TATTAAGGGAATTCACTCGAGAAGAAGTGGATATGTTCTTCCTTGACTACGTAGCCCCTACACTCAATTCATTGAAGATA
TATGATGACTTAGACCAGCAAACTATTGATATACTAAAACAACATTGGGAACAGGCATTCTACAACATATATTCATCATA
TAGCCAACAGTTCCTTGATGTTCTTACAGAGGGAATTCAAAAAGGACTTGGTGAAGAAGAAATTGCAAAGAATCTTAAAA
AAGTTGCAAAAGATGTTAAGGGTTCAAGATTGCAGATGAGGGCTCGTGAGGAGATGAACAAAACCTATAATCTGACAAGA
GCGAGAAGGTTCTGGAATGACAAGGTAATATATGTCACAATGAAAGATGAAAGAGTTAGACCAAGCCATAGAAAACTGCA
TGGGCTCATCTTTGTACCTGCTGAAAGACCTGAATTAGTGCCACCATTAGGATACGGTTGTAGATGCACAATAACACCTG
TGAGGGATTAA

Upstream 100 bases:

>100_bases
GAATGCAATTGATGAAGAGGATTACTCATACCGCCAAGTGTTTGACGATGAAGAAGAATTTGAGGAATTTGAGTTTGGAA
GTTTCTTTTAAGGTGATACT

Downstream 100 bases:

>100_bases
AATGCCAAATAATACAAATAATAAATTATGTAAAGTCTGCAACTCTCCACACAGGGCTGAGATAGAAGCATTATATTTCC
AGGGCTGGGGAGCTAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MEDDKIQMETVSIDLAKDTAVNMALRILFTQIFTPYSIVSIDGKQLSKDVIDEISGLIDRHIRDLQLAFSDFLLKGKCYL
YKLHYINPNSMNFKERKHWNPQKGRYEYCITYTIKRNNAERWWEVDTEEDVRVVIAPMELRQHFPADVEFYDEKYLGVYY
NPIPIHETIQEIADQKNTLALKVLPLMVQKTLIPTIIGITQNTKAGEIIKKALSNHQNRTRVYIPATPDEVKFETISIGK
DIPTDLIETMLYYYDSAIFMGLGTSISIVKASGQELTTSRTVDRNILRIVQGYQQEIERWIADQLEKMGYKGIWVKFANP
DPDWEINMLQKAKMVAELKAQEQVAKYDFSALIERIFPSNEFGEILAAYPDLTEKEVEKLLKMAKEGKGGLEYADEEKQK
LLEKKRKSLEKIISKLEKVGDKFGKKSMENFVNWILETYERLGYNELMQDWDELLREFTREEVDMFFLDYVAPTLNSLKI
YDDLDQQTIDILKQHWEQAFYNIYSSYSQQFLDVLTEGIQKGLGEEEIAKNLKKVAKDVKGSRLQMRAREEMNKTYNLTR
ARRFWNDKVIYVTMKDERVRPSHRKLHGLIFVPAERPELVPPLGYGCRCTITPVRD

Sequences:

>Translated_616_residues
MEDDKIQMETVSIDLAKDTAVNMALRILFTQIFTPYSIVSIDGKQLSKDVIDEISGLIDRHIRDLQLAFSDFLLKGKCYL
YKLHYINPNSMNFKERKHWNPQKGRYEYCITYTIKRNNAERWWEVDTEEDVRVVIAPMELRQHFPADVEFYDEKYLGVYY
NPIPIHETIQEIADQKNTLALKVLPLMVQKTLIPTIIGITQNTKAGEIIKKALSNHQNRTRVYIPATPDEVKFETISIGK
DIPTDLIETMLYYYDSAIFMGLGTSISIVKASGQELTTSRTVDRNILRIVQGYQQEIERWIADQLEKMGYKGIWVKFANP
DPDWEINMLQKAKMVAELKAQEQVAKYDFSALIERIFPSNEFGEILAAYPDLTEKEVEKLLKMAKEGKGGLEYADEEKQK
LLEKKRKSLEKIISKLEKVGDKFGKKSMENFVNWILETYERLGYNELMQDWDELLREFTREEVDMFFLDYVAPTLNSLKI
YDDLDQQTIDILKQHWEQAFYNIYSSYSQQFLDVLTEGIQKGLGEEEIAKNLKKVAKDVKGSRLQMRAREEMNKTYNLTR
ARRFWNDKVIYVTMKDERVRPSHRKLHGLIFVPAERPELVPPLGYGCRCTITPVRD
>Mature_616_residues
MEDDKIQMETVSIDLAKDTAVNMALRILFTQIFTPYSIVSIDGKQLSKDVIDEISGLIDRHIRDLQLAFSDFLLKGKCYL
YKLHYINPNSMNFKERKHWNPQKGRYEYCITYTIKRNNAERWWEVDTEEDVRVVIAPMELRQHFPADVEFYDEKYLGVYY
NPIPIHETIQEIADQKNTLALKVLPLMVQKTLIPTIIGITQNTKAGEIIKKALSNHQNRTRVYIPATPDEVKFETISIGK
DIPTDLIETMLYYYDSAIFMGLGTSISIVKASGQELTTSRTVDRNILRIVQGYQQEIERWIADQLEKMGYKGIWVKFANP
DPDWEINMLQKAKMVAELKAQEQVAKYDFSALIERIFPSNEFGEILAAYPDLTEKEVEKLLKMAKEGKGGLEYADEEKQK
LLEKKRKSLEKIISKLEKVGDKFGKKSMENFVNWILETYERLGYNELMQDWDELLREFTREEVDMFFLDYVAPTLNSLKI
YDDLDQQTIDILKQHWEQAFYNIYSSYSQQFLDVLTEGIQKGLGEEEIAKNLKKVAKDVKGSRLQMRAREEMNKTYNLTR
ARRFWNDKVIYVTMKDERVRPSHRKLHGLIFVPAERPELVPPLGYGCRCTITPVRD

Specific function: Unknown

COG id: COG2369

COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y329_METJA (Q57775)

Other databases:

- EMBL:   L77117
- PIR:   A64341
- RefSeq:   NP_247301.1
- ProteinModelPortal:   Q57775
- GeneID:   1451184
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0329
- NMPDR:   fig|243232.1.peg.338
- TIGR:   MJ0329
- OMA:   ERIFPSN
- ProtClustDB:   CLSK2517573
- BioCyc:   MJAN243232:MJ_0329-MONOMER
- InterPro:   IPR006528
- TIGRFAMs:   TIGR01641

Pfam domain/function: PF04233 Phage_Mu_F

EC number: NA

Molecular weight: Translated: 72038; Mature: 72038

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDDKIQMETVSIDLAKDTAVNMALRILFTQIFTPYSIVSIDGKQLSKDVIDEISGLIDR
CCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH
HIRDLQLAFSDFLLKGKCYLYKLHYINPNSMNFKERKHWNPQKGRYEYCITYTIKRNNAE
HHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEEEEEEECCCCC
RWWEVDTEEDVRVVIAPMELRQHFPADVEFYDEKYLGVYYNPIPIHETIQEIADQKNTLA
CCEECCCCCCCEEEEEEHHHHHCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCCEE
LKVLPLMVQKTLIPTIIGITQNTKAGEIIKKALSNHQNRTRVYIPATPDEVKFETISIGK
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCC
DIPTDLIETMLYYYDSAIFMGLGTSISIVKASGQELTTSRTVDRNILRIVQGYQQEIERW
CCCHHHHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IADQLEKMGYKGIWVKFANPDPDWEINMLQKAKMVAELKAQEQVAKYDFSALIERIFPSN
HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EFGEILAAYPDLTEKEVEKLLKMAKEGKGGLEYADEEKQKLLEKKRKSLEKIISKLEKVG
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DKFGKKSMENFVNWILETYERLGYNELMQDWDELLREFTREEVDMFFLDYVAPTLNSLKI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEH
YDDLDQQTIDILKQHWEQAFYNIYSSYSQQFLDVLTEGIQKGLGEEEIAKNLKKVAKDVK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GSRLQMRAREEMNKTYNLTRARRFWNDKVIYVTMKDERVRPSHRKLHGLIFVPAERPELV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCEEEEEEEECCCCCCC
PPLGYGCRCTITPVRD
CCCCCCCEEEEECCCC
>Mature Secondary Structure
MEDDKIQMETVSIDLAKDTAVNMALRILFTQIFTPYSIVSIDGKQLSKDVIDEISGLIDR
CCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH
HIRDLQLAFSDFLLKGKCYLYKLHYINPNSMNFKERKHWNPQKGRYEYCITYTIKRNNAE
HHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEEEEEEECCCCC
RWWEVDTEEDVRVVIAPMELRQHFPADVEFYDEKYLGVYYNPIPIHETIQEIADQKNTLA
CCEECCCCCCCEEEEEEHHHHHCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCCEE
LKVLPLMVQKTLIPTIIGITQNTKAGEIIKKALSNHQNRTRVYIPATPDEVKFETISIGK
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCC
DIPTDLIETMLYYYDSAIFMGLGTSISIVKASGQELTTSRTVDRNILRIVQGYQQEIERW
CCCHHHHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IADQLEKMGYKGIWVKFANPDPDWEINMLQKAKMVAELKAQEQVAKYDFSALIERIFPSN
HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EFGEILAAYPDLTEKEVEKLLKMAKEGKGGLEYADEEKQKLLEKKRKSLEKIISKLEKVG
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DKFGKKSMENFVNWILETYERLGYNELMQDWDELLREFTREEVDMFFLDYVAPTLNSLKI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEH
YDDLDQQTIDILKQHWEQAFYNIYSSYSQQFLDVLTEGIQKGLGEEEIAKNLKKVAKDVK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GSRLQMRAREEMNKTYNLTRARRFWNDKVIYVTMKDERVRPSHRKLHGLIFVPAERPELV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHCEEEEEEEECCCCCCC
PPLGYGCRCTITPVRD
CCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087