| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668464
Identifier: 15668464
GI number: 15668464
Start: 271795
End: 272811
Strand: Reverse
Name: 15668464
Synonym: MJ0289
Alternate gene names: NA
Gene position: 272811-271795 (Counterclockwise)
Preceding gene: 15668465
Following gene: 15668463
Centisome position: 16.39
GC content: 38.54
Gene sequence:
>1017_bases GTGTTTGAAATGAAAAATTCTACGAGGTATATATTATCGCTGCTACTCTCAATAATCATGGGAGTTGCAGTAATGGGTTC CACATTTGCTATTTCAACAACTTATGGAACAGGACACACAACTGCAACTGTAGACAACCTTAAGCCTGTAGTTAATTGTA GCAGTTACGAAATGGTAATAAGAACAGTTCAAGGAATAAAAGTATATGAATATAAGAATACAACTGGAGTAACTCCTGGT CTTTTAAGAAGTGACGCTTTAGAGGCTTATGCCTATACTGGAGAAGGAGTAACCTTCTATGTAAATGTTAGCGACCCTAA CGGGGAGCAAGATTTACAAACAAATGGAGCTGGAGTAGATTTCTTATTAGTTCCACAAGGACAATCTCCTTCAAATCCAA CATATGTAATCCATGCAGGATTTGACACATCAACAAGTGGAGATGCTGATTTAACAACCTTAACATTCTACGCACAATGG ACAGTCCCTGCAGGCGCATACGGATGCTTCGATGTCTATGTTAAAGCAACAGACAAACATGGTGCATGCACAGGATACAT CAAGAAAGGTAAGATATTCTTGAACCCAATGATTGGAATAAACGTTACAAAAGATAACGATGCATATCCTGCTCCATTCA CAGGATTAAGCTTCGGTAATGTAAATCCAGGAGATACTAATGTCCCAGCAACTGAGAATGTTGTAACAATCCACAATATT GACCCAGATGGAGTAGGAACTAAGATAGCAGTATTCGTTTCAGCAACCTCAATGACACAGGCAGGAGGAACTGGAATAAT TCCAGCAGAGAATATCAAAGCACATGTTATAAAAGCAAACAATATGACACAGAGCTACAATACTCACCTCCAAAACAATG TCAAAGTTCTATTATGGCAACCACTCAAACCATGCCATACAAATGCTTTAGAAGTTAATTTCACACTCGATGTTCCAACA CCATTACCAAGCGGTTGCTATGGAGGTTCAATTACATTCTATGGACTTGGATTATAA
Upstream 100 bases:
>100_bases ATGGTAGTAGATGGTAGCATTATACATTGGTTGATTTATTTAATACTCTCAATAATTGGGGGAGGTTTTCCTTGCTAATA AAATTTAAGAAATTTATGAG
Downstream 100 bases:
>100_bases ATCCCCCAACTTTTTAATTTTTTGATAGTAAGGTGATTACTTATGAAAAAATTCTCTGCAATTTTTGGTTTATTATCTGT CATATTTGTCATTATGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MFEMKNSTRYILSLLLSIIMGVAVMGSTFAISTTYGTGHTTATVDNLKPVVNCSSYEMVIRTVQGIKVYEYKNTTGVTPG LLRSDALEAYAYTGEGVTFYVNVSDPNGEQDLQTNGAGVDFLLVPQGQSPSNPTYVIHAGFDTSTSGDADLTTLTFYAQW TVPAGAYGCFDVYVKATDKHGACTGYIKKGKIFLNPMIGINVTKDNDAYPAPFTGLSFGNVNPGDTNVPATENVVTIHNI DPDGVGTKIAVFVSATSMTQAGGTGIIPAENIKAHVIKANNMTQSYNTHLQNNVKVLLWQPLKPCHTNALEVNFTLDVPT PLPSGCYGGSITFYGLGL
Sequences:
>Translated_338_residues MFEMKNSTRYILSLLLSIIMGVAVMGSTFAISTTYGTGHTTATVDNLKPVVNCSSYEMVIRTVQGIKVYEYKNTTGVTPG LLRSDALEAYAYTGEGVTFYVNVSDPNGEQDLQTNGAGVDFLLVPQGQSPSNPTYVIHAGFDTSTSGDADLTTLTFYAQW TVPAGAYGCFDVYVKATDKHGACTGYIKKGKIFLNPMIGINVTKDNDAYPAPFTGLSFGNVNPGDTNVPATENVVTIHNI DPDGVGTKIAVFVSATSMTQAGGTGIIPAENIKAHVIKANNMTQSYNTHLQNNVKVLLWQPLKPCHTNALEVNFTLDVPT PLPSGCYGGSITFYGLGL >Mature_338_residues MFEMKNSTRYILSLLLSIIMGVAVMGSTFAISTTYGTGHTTATVDNLKPVVNCSSYEMVIRTVQGIKVYEYKNTTGVTPG LLRSDALEAYAYTGEGVTFYVNVSDPNGEQDLQTNGAGVDFLLVPQGQSPSNPTYVIHAGFDTSTSGDADLTTLTFYAQW TVPAGAYGCFDVYVKATDKHGACTGYIKKGKIFLNPMIGINVTKDNDAYPAPFTGLSFGNVNPGDTNVPATENVVTIHNI DPDGVGTKIAVFVSATSMTQAGGTGIIPAENIKAHVIKANNMTQSYNTHLQNNVKVLLWQPLKPCHTNALEVNFTLDVPT PLPSGCYGGSITFYGLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y289_METJA (Q57737)
Other databases:
- EMBL: L77117 - PIR: B64336 - RefSeq: NP_247262.1 - GeneID: 1451144 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0289 - NMPDR: fig|243232.1.peg.299 - TIGR: MJ0289 - OMA: NALEVNF - ProtClustDB: CLSK2517568 - BioCyc: MJAN243232:MJ_0289-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36045; Mature: 36045
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xaee1f40)-; HASH(0x406b2128)-; HASH(0xc052990)-;
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEMKNSTRYILSLLLSIIMGVAVMGSTFAISTTYGTGHTTATVDNLKPVVNCSSYEMVI CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCEEECCCCHHEEE RTVQGIKVYEYKNTTGVTPGLLRSDALEAYAYTGEGVTFYVNVSDPNGEQDLQTNGAGVD EECCCEEEEEECCCCCCCCCHHHHCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEE FLLVPQGQSPSNPTYVIHAGFDTSTSGDADLTTLTFYAQWTVPAGAYGCFDVYVKATDKH EEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCC GACTGYIKKGKIFLNPMIGINVTKDNDAYPAPFTGLSFGNVNPGDTNVPATENVVTIHNI CCEEEEEECCEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC DPDGVGTKIAVFVSATSMTQAGGTGIIPAENIKAHVIKANNMTQSYNTHLQNNVKVLLWQ CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCEEEEEEC PLKPCHTNALEVNFTLDVPTPLPSGCYGGSITFYGLGL CCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECH >Mature Secondary Structure MFEMKNSTRYILSLLLSIIMGVAVMGSTFAISTTYGTGHTTATVDNLKPVVNCSSYEMVI CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCEEECCCCHHEEE RTVQGIKVYEYKNTTGVTPGLLRSDALEAYAYTGEGVTFYVNVSDPNGEQDLQTNGAGVD EECCCEEEEEECCCCCCCCCHHHHCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEE FLLVPQGQSPSNPTYVIHAGFDTSTSGDADLTTLTFYAQWTVPAGAYGCFDVYVKATDKH EEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCC GACTGYIKKGKIFLNPMIGINVTKDNDAYPAPFTGLSFGNVNPGDTNVPATENVVTIHNI CCEEEEEECCEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC DPDGVGTKIAVFVSATSMTQAGGTGIIPAENIKAHVIKANNMTQSYNTHLQNNVKVLLWQ CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCEEEEEEC PLKPCHTNALEVNFTLDVPTPLPSGCYGGSITFYGLGL CCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087