Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668465

Identifier: 15668465

GI number: 15668465

Start: 273115

End: 273750

Strand: Reverse

Name: 15668465

Synonym: MJ0290

Alternate gene names: NA

Gene position: 273750-273115 (Counterclockwise)

Preceding gene: 15668467

Following gene: 15668464

Centisome position: 16.44

GC content: 24.37

Gene sequence:

>636_bases
ATGAAATGTATTTCAAAACAAGGAGAAATTAAAGAGTTAATTAAAAATGGTAAAATAAATGATGTTTTACAACTGATTGA
AGAAGATACATTATTGTTAGAGGAAATTTATGGTTTTTTAAAATCTGATGATATTCAATTAAAAATAACTTGTTTAGCTA
TTTTAGGAAATTTATATCTAAAAGGAAAAGTCCAAATTACTCAACTAATTAAACATTTAGAAGAGGTACTTTTAGAAAAT
GACAAAGATGCTATTTTAAATGCCCTTTTAATTCTAAAAGAAATTCCTGAAGTGTATCAGGAGGACTTATTGAAAAGGAT
AATATTAAAATATATTGGAAAAGATATAAAAGATTGTGAGGATGATAAAGATAAAAGTACTTTACCAAGTGTAAAGCGAG
ACAAAATAATGATAATATTTGAAATCTTAAAGGCTGTAAAGAACAAGGAATTAAAAAAGACAAAAATAATGTATGCTGCA
AATTTAGATTGGAAAACATTTCGTAATTATATAGGATACTTGTTAGATAATGAATTTATCAGAAAAACAGATGGGGTTTA
TACATTAACACCTAAGGGTGAGTTATTATTGGAGAAAATTGAAGAAGTTTTTAGATTAATTTATCCAGATAAATAA

Upstream 100 bases:

>100_bases
TTGAATAAAGCATTGTTAAAGTAATTTTAATATAATAAAATTACGAACAATATTTATATGTAATCTCTGTTCTGTTTGCG
GGTCGTTTTGGGGTGAAACT

Downstream 100 bases:

>100_bases
TTGCCTTATTTTCTTTTTTACTTTTCATAAAAAATTTAAAAACTAAATGGATTAACACATCTGTTTTTTCCACATGCTTT
ACATTCATAAATCATATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKCISKQGEIKELIKNGKINDVLQLIEEDTLLLEEIYGFLKSDDIQLKITCLAILGNLYLKGKVQITQLIKHLEEVLLEN
DKDAILNALLILKEIPEVYQEDLLKRIILKYIGKDIKDCEDDKDKSTLPSVKRDKIMIIFEILKAVKNKELKKTKIMYAA
NLDWKTFRNYIGYLLDNEFIRKTDGVYTLTPKGELLLEKIEEVFRLIYPDK

Sequences:

>Translated_211_residues
MKCISKQGEIKELIKNGKINDVLQLIEEDTLLLEEIYGFLKSDDIQLKITCLAILGNLYLKGKVQITQLIKHLEEVLLEN
DKDAILNALLILKEIPEVYQEDLLKRIILKYIGKDIKDCEDDKDKSTLPSVKRDKIMIIFEILKAVKNKELKKTKIMYAA
NLDWKTFRNYIGYLLDNEFIRKTDGVYTLTPKGELLLEKIEEVFRLIYPDK
>Mature_211_residues
MKCISKQGEIKELIKNGKINDVLQLIEEDTLLLEEIYGFLKSDDIQLKITCLAILGNLYLKGKVQITQLIKHLEEVLLEN
DKDAILNALLILKEIPEVYQEDLLKRIILKYIGKDIKDCEDDKDKSTLPSVKRDKIMIIFEILKAVKNKELKKTKIMYAA
NLDWKTFRNYIGYLLDNEFIRKTDGVYTLTPKGELLLEKIEEVFRLIYPDK

Specific function: Unknown

COG id: COG3432

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y290_METJA (Q57738)

Other databases:

- EMBL:   L77117
- PIR:   C64336
- RefSeq:   NP_247263.1
- ProteinModelPortal:   Q57738
- SMR:   Q57738
- GeneID:   1451145
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0290
- NMPDR:   fig|243232.1.peg.300
- TIGR:   MJ0290
- OMA:   ERGRIND
- ProtClustDB:   CLSK2517569
- BioCyc:   MJAN243232:MJ_0290-MONOMER
- GO:   GO:0005488
- InterPro:   IPR011989
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.25.10.10
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24621; Mature: 24621

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCISKQGEIKELIKNGKINDVLQLIEEDTLLLEEIYGFLKSDDIQLKITCLAILGNLYL
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
KGKVQITQLIKHLEEVLLENDKDAILNALLILKEIPEVYQEDLLKRIILKYIGKDIKDCE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
DDKDKSTLPSVKRDKIMIIFEILKAVKNKELKKTKIMYAANLDWKTFRNYIGYLLDNEFI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH
RKTDGVYTLTPKGELLLEKIEEVFRLIYPDK
HHCCCEEEECCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKCISKQGEIKELIKNGKINDVLQLIEEDTLLLEEIYGFLKSDDIQLKITCLAILGNLYL
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
KGKVQITQLIKHLEEVLLENDKDAILNALLILKEIPEVYQEDLLKRIILKYIGKDIKDCE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
DDKDKSTLPSVKRDKIMIIFEILKAVKNKELKKTKIMYAANLDWKTFRNYIGYLLDNEFI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH
RKTDGVYTLTPKGELLLEKIEEVFRLIYPDK
HHCCCEEEECCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087