| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668465
Identifier: 15668465
GI number: 15668465
Start: 273115
End: 273750
Strand: Reverse
Name: 15668465
Synonym: MJ0290
Alternate gene names: NA
Gene position: 273750-273115 (Counterclockwise)
Preceding gene: 15668467
Following gene: 15668464
Centisome position: 16.44
GC content: 24.37
Gene sequence:
>636_bases ATGAAATGTATTTCAAAACAAGGAGAAATTAAAGAGTTAATTAAAAATGGTAAAATAAATGATGTTTTACAACTGATTGA AGAAGATACATTATTGTTAGAGGAAATTTATGGTTTTTTAAAATCTGATGATATTCAATTAAAAATAACTTGTTTAGCTA TTTTAGGAAATTTATATCTAAAAGGAAAAGTCCAAATTACTCAACTAATTAAACATTTAGAAGAGGTACTTTTAGAAAAT GACAAAGATGCTATTTTAAATGCCCTTTTAATTCTAAAAGAAATTCCTGAAGTGTATCAGGAGGACTTATTGAAAAGGAT AATATTAAAATATATTGGAAAAGATATAAAAGATTGTGAGGATGATAAAGATAAAAGTACTTTACCAAGTGTAAAGCGAG ACAAAATAATGATAATATTTGAAATCTTAAAGGCTGTAAAGAACAAGGAATTAAAAAAGACAAAAATAATGTATGCTGCA AATTTAGATTGGAAAACATTTCGTAATTATATAGGATACTTGTTAGATAATGAATTTATCAGAAAAACAGATGGGGTTTA TACATTAACACCTAAGGGTGAGTTATTATTGGAGAAAATTGAAGAAGTTTTTAGATTAATTTATCCAGATAAATAA
Upstream 100 bases:
>100_bases TTGAATAAAGCATTGTTAAAGTAATTTTAATATAATAAAATTACGAACAATATTTATATGTAATCTCTGTTCTGTTTGCG GGTCGTTTTGGGGTGAAACT
Downstream 100 bases:
>100_bases TTGCCTTATTTTCTTTTTTACTTTTCATAAAAAATTTAAAAACTAAATGGATTAACACATCTGTTTTTTCCACATGCTTT ACATTCATAAATCATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKCISKQGEIKELIKNGKINDVLQLIEEDTLLLEEIYGFLKSDDIQLKITCLAILGNLYLKGKVQITQLIKHLEEVLLEN DKDAILNALLILKEIPEVYQEDLLKRIILKYIGKDIKDCEDDKDKSTLPSVKRDKIMIIFEILKAVKNKELKKTKIMYAA NLDWKTFRNYIGYLLDNEFIRKTDGVYTLTPKGELLLEKIEEVFRLIYPDK
Sequences:
>Translated_211_residues MKCISKQGEIKELIKNGKINDVLQLIEEDTLLLEEIYGFLKSDDIQLKITCLAILGNLYLKGKVQITQLIKHLEEVLLEN DKDAILNALLILKEIPEVYQEDLLKRIILKYIGKDIKDCEDDKDKSTLPSVKRDKIMIIFEILKAVKNKELKKTKIMYAA NLDWKTFRNYIGYLLDNEFIRKTDGVYTLTPKGELLLEKIEEVFRLIYPDK >Mature_211_residues MKCISKQGEIKELIKNGKINDVLQLIEEDTLLLEEIYGFLKSDDIQLKITCLAILGNLYLKGKVQITQLIKHLEEVLLEN DKDAILNALLILKEIPEVYQEDLLKRIILKYIGKDIKDCEDDKDKSTLPSVKRDKIMIIFEILKAVKNKELKKTKIMYAA NLDWKTFRNYIGYLLDNEFIRKTDGVYTLTPKGELLLEKIEEVFRLIYPDK
Specific function: Unknown
COG id: COG3432
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y290_METJA (Q57738)
Other databases:
- EMBL: L77117 - PIR: C64336 - RefSeq: NP_247263.1 - ProteinModelPortal: Q57738 - SMR: Q57738 - GeneID: 1451145 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0290 - NMPDR: fig|243232.1.peg.300 - TIGR: MJ0290 - OMA: ERGRIND - ProtClustDB: CLSK2517569 - BioCyc: MJAN243232:MJ_0290-MONOMER - GO: GO:0005488 - InterPro: IPR011989 - InterPro: IPR011991 - Gene3D: G3DSA:1.25.10.10 - Gene3D: G3DSA:1.10.10.10
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24621; Mature: 24621
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCISKQGEIKELIKNGKINDVLQLIEEDTLLLEEIYGFLKSDDIQLKITCLAILGNLYL CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH KGKVQITQLIKHLEEVLLENDKDAILNALLILKEIPEVYQEDLLKRIILKYIGKDIKDCE CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC DDKDKSTLPSVKRDKIMIIFEILKAVKNKELKKTKIMYAANLDWKTFRNYIGYLLDNEFI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH RKTDGVYTLTPKGELLLEKIEEVFRLIYPDK HHCCCEEEECCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKCISKQGEIKELIKNGKINDVLQLIEEDTLLLEEIYGFLKSDDIQLKITCLAILGNLYL CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH KGKVQITQLIKHLEEVLLENDKDAILNALLILKEIPEVYQEDLLKRIILKYIGKDIKDCE CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC DDKDKSTLPSVKRDKIMIIFEILKAVKNKELKKTKIMYAANLDWKTFRNYIGYLLDNEFI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH RKTDGVYTLTPKGELLLEKIEEVFRLIYPDK HHCCCEEEECCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087