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The map label for this gene is 15668446

Identifier: 15668446

GI number: 15668446

Start: 257410

End: 257649

Strand: Direct

Name: 15668446

Synonym: MJ0272

Alternate gene names: NA

Gene position: 257410-257649 (Clockwise)

Preceding gene: 15668445

Following gene: 15668447

Centisome position: 15.46

GC content: 29.58

Gene sequence:

>240_bases
TTGAGTTCTATACATTTAAAAAGTTTTCATAGTGAAACAATGAAAAACAAGCTGAAATACTATAGAGCATTGCATAATTT
AACTCAGGAGGATTTAGCAAAAAAGTTAGGAGTTAGTAGGCAAACAATCATCGCCATAGAGAAGGGTAAATACGACCCTT
CTTTAAAATTGGCATTTAAAATAGCCAAGTTTTTTGGTGTTAAGATTGAGGATATATTTATTTATGAAGATGATGAATAA

Upstream 100 bases:

>100_bases
TATGTGTTTTTATTGATATTACCTTCAAAAGAGTTCTGTATTAACGCAGTTGATATTATTAGAACAATAATGCTTGTTAT
TACGGCAAATATGTTTATAA

Downstream 100 bases:

>100_bases
TTATTGGTGAGATTATGATAACTATAGATATTACAAAAAAGGAAGATATCGATGATATGATTAATCTATTAAAACAACTT
TTTGAGATAGAGAAGGATTT

Product: repressor protein YorfE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MSSIHLKSFHSETMKNKLKYYRALHNLTQEDLAKKLGVSRQTIIAIEKGKYDPSLKLAFKIAKFFGVKIEDIFIYEDDE

Sequences:

>Translated_79_residues
MSSIHLKSFHSETMKNKLKYYRALHNLTQEDLAKKLGVSRQTIIAIEKGKYDPSLKLAFKIAKFFGVKIEDIFIYEDDE
>Mature_78_residues
SSIHLKSFHSETMKNKLKYYRALHNLTQEDLAKKLGVSRQTIIAIEKGKYDPSLKLAFKIAKFFGVKIEDIFIYEDDE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 9224; Mature: 9093

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIHLKSFHSETMKNKLKYYRALHNLTQEDLAKKLGVSRQTIIAIEKGKYDPSLKLAFK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHH
IAKFFGVKIEDIFIYEDDE
HHHHHCCEEEEEEEEECCC
>Mature Secondary Structure 
SSIHLKSFHSETMKNKLKYYRALHNLTQEDLAKKLGVSRQTIIAIEKGKYDPSLKLAFK
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHH
IAKFFGVKIEDIFIYEDDE
HHHHHCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]