Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668445

Identifier: 15668445

GI number: 15668445

Start: 256899

End: 257441

Strand: Direct

Name: 15668445

Synonym: MJ0271

Alternate gene names: NA

Gene position: 256899-257441 (Clockwise)

Preceding gene: 15668436

Following gene: 15668446

Centisome position: 15.43

GC content: 23.02

Gene sequence:

>543_bases
ATGGACTTAAAAAGTAATATAAAACTTATATTGGCTACTGATTTATTAGCAGTTTTAATTTTATCTCTATTTATCAAAAA
TTTTAAAATGGTTTTAGCTTTCTTATTGGCAGTGTTTGTAATTTGGTTATTTATTGATAAAAATAATATAAATGAAAGGT
TATATGAGAATTTATTAGCAATGAGTGTTGGATTTATTGAAGGGATTTTGATATTTTTAGGAATTATCTACAATGAGGTA
TTTTTAGATATTACTTTAGGAATATTTGCAATACTTATTTTAATTGTTATGGGGATTTTATTTCCAAAGTATAAGTTAAT
CTTTGAAGTTTTTGATGAATTCGTTGAGCATCTTAAACAAAAATCTGGATTTTTAACTTTAATATCAATTTTCGGAATGT
TACTTACTATTTATGTGTTTTTATTGATATTACCTTCAAAAGAGTTCTGTATTAACGCAGTTGATATTATTAGAACAATA
ATGCTTGTTATTACGGCAAATATGTTTATAATTGAGTTCTATACATTTAAAAAGTTTTCATAG

Upstream 100 bases:

>100_bases
GCATTTTCTTTAGATATAGTTATATTTTTAATGGCAACTTTTGTTTTGAATTTGATATTATCTTTTATCTACTGCTTTAA
AATACACTTAAGGTGAAACT

Downstream 100 bases:

>100_bases
TGAAACAATGAAAAACAAGCTGAAATACTATAGAGCATTGCATAATTTAACTCAGGAGGATTTAGCAAAAAAGTTAGGAG
TTAGTAGGCAAACAATCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MDLKSNIKLILATDLLAVLILSLFIKNFKMVLAFLLAVFVIWLFIDKNNINERLYENLLAMSVGFIEGILIFLGIIYNEV
FLDITLGIFAILILIVMGILFPKYKLIFEVFDEFVEHLKQKSGFLTLISIFGMLLTIYVFLLILPSKEFCINAVDIIRTI
MLVITANMFIIEFYTFKKFS

Sequences:

>Translated_180_residues
MDLKSNIKLILATDLLAVLILSLFIKNFKMVLAFLLAVFVIWLFIDKNNINERLYENLLAMSVGFIEGILIFLGIIYNEV
FLDITLGIFAILILIVMGILFPKYKLIFEVFDEFVEHLKQKSGFLTLISIFGMLLTIYVFLLILPSKEFCINAVDIIRTI
MLVITANMFIIEFYTFKKFS
>Mature_180_residues
MDLKSNIKLILATDLLAVLILSLFIKNFKMVLAFLLAVFVIWLFIDKNNINERLYENLLAMSVGFIEGILIFLGIIYNEV
FLDITLGIFAILILIVMGILFPKYKLIFEVFDEFVEHLKQKSGFLTLISIFGMLLTIYVFLLILPSKEFCINAVDIIRTI
MLVITANMFIIEFYTFKKFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y271_METJA (Q57719)

Other databases:

- EMBL:   L77117
- PIR:   H64333
- RefSeq:   NP_247243.1
- ProteinModelPortal:   Q57719
- GeneID:   1451125
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0271
- NMPDR:   fig|243232.1.peg.280
- TIGR:   MJ0271
- ProtClustDB:   CLSK2749863
- BioCyc:   MJAN243232:MJ_0271-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20813; Mature: 20813

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc41f9c4)-; HASH(0xb664000)-; HASH(0xc66c6a0)-; HASH(0xbf94688)-; HASH(0xb5bef24)-; HASH(0xbfaf7b0)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKSNIKLILATDLLAVLILSLFIKNFKMVLAFLLAVFVIWLFIDKNNINERLYENLLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
MSVGFIEGILIFLGIIYNEVFLDITLGIFAILILIVMGILFPKYKLIFEVFDEFVEHLKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSGFLTLISIFGMLLTIYVFLLILPSKEFCINAVDIIRTIMLVITANMFIIEFYTFKKFS
HCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MDLKSNIKLILATDLLAVLILSLFIKNFKMVLAFLLAVFVIWLFIDKNNINERLYENLLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
MSVGFIEGILIFLGIIYNEVFLDITLGIFAILILIVMGILFPKYKLIFEVFDEFVEHLKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSGFLTLISIFGMLLTIYVFLLILPSKEFCINAVDIIRTIMLVITANMFIIEFYTFKKFS
HCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087