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The map label for this gene is rpl18e

Identifier: 15668365

GI number: 15668365

Start: 189291

End: 189656

Strand: Direct

Name: rpl18e

Synonym: MJ0193

Alternate gene names: 15668365

Gene position: 189291-189656 (Clockwise)

Preceding gene: 15668364

Following gene: 15668366

Centisome position: 11.37

GC content: 33.88

Gene sequence:

>366_bases
ATGGCAAAGAAAATAACAGCTACAAACCCAAGGTTGGTTAAGTTAATTGAGATATTAAAGCAGGAAAGTTATAAAAATCA
GGCAAAGATTTGGAAGGATATTGCAAGAAGGTTAGCAAAACCAAGAAGAAGGAGAGCAGAGGTAAATTTAAGTAAGATAA
ACAGATACACAAAAGAAGGAGATGTTGTTTTAGTTCCTGGTAAAGTTTTAGGAGCTGGGAAGTTAGAGCACAAGGTTGTC
GTTGCTGCATTTGCATTCTCAGAAACAGCTAAAAAATTAATTAAAGAAGCTGGAGGAGAAGCAATAACAATTGAAGAGCT
AATAAAAAGAAATCCAAAAGGTTCAAATGTTAAAATTATGGCGTAA

Upstream 100 bases:

>100_bases
AGTTAGAAATGATTGAACAATAAAAAACCATTTTCATTCTAATTATTTGTCAAACCTTATAATAATTATAAAAGGTTTGA
AGGAAAACACGGTGATATAT

Downstream 100 bases:

>100_bases
ATATAAACTGGATTAAAACACGGTGATAGTTATGACAGTAATAGATGCTGAAGGAGCGATATTGGGAAGATTGGCTTCAG
AAGTAGCAAAAAGAGTTTTG

Product: 50S ribosomal protein L18e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MAKKITATNPRLVKLIEILKQESYKNQAKIWKDIARRLAKPRRRRAEVNLSKINRYTKEGDVVLVPGKVLGAGKLEHKVV
VAAFAFSETAKKLIKEAGGEAITIEELIKRNPKGSNVKIMA

Sequences:

>Translated_121_residues
MAKKITATNPRLVKLIEILKQESYKNQAKIWKDIARRLAKPRRRRAEVNLSKINRYTKEGDVVLVPGKVLGAGKLEHKVV
VAAFAFSETAKKLIKEAGGEAITIEELIKRNPKGSNVKIMA
>Mature_120_residues
AKKITATNPRLVKLIEILKQESYKNQAKIWKDIARRLAKPRRRRAEVNLSKINRYTKEGDVVLVPGKVLGAGKLEHKVVV
AAFAFSETAKKLIKEAGGEAITIEELIKRNPKGSNVKIMA

Specific function: Unknown

COG id: COG1727

COG function: function code J; Ribosomal protein L18E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L18e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL18E_METJA (P54022)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_247161.1
- ProteinModelPortal:   P54022
- SMR:   P54022
- GeneID:   1451041
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0193
- NMPDR:   fig|243232.1.peg.198
- TIGR:   MJ0193
- HOGENOM:   HBG392438
- OMA:   SKINRYT
- ProtClustDB:   PRK04005
- BioCyc:   MJAN243232:MJ_0193-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00329
- InterPro:   IPR001196
- InterPro:   IPR000039
- InterPro:   IPR021131
- InterPro:   IPR022947
- InterPro:   IPR021132
- PANTHER:   PTHR10934

Pfam domain/function: PF00828 Ribosomal_L18e; SSF52080 Ribosomal_L18e/L15

EC number: NA

Molecular weight: Translated: 13532; Mature: 13401

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: PS01106 RIBOSOMAL_L18E; PS00475 RIBOSOMAL_L15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKITATNPRLVKLIEILKQESYKNQAKIWKDIARRLAKPRRRRAEVNLSKINRYTKEG
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
DVVLVPGKVLGAGKLEHKVVVAAFAFSETAKKLIKEAGGEAITIEELIKRNPKGSNVKIM
CEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCEEEE
A
C
>Mature Secondary Structure 
AKKITATNPRLVKLIEILKQESYKNQAKIWKDIARRLAKPRRRRAEVNLSKINRYTKEG
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
DVVLVPGKVLGAGKLEHKVVVAAFAFSETAKKLIKEAGGEAITIEELIKRNPKGSNVKIM
CEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCEEEE
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087