Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is minD [C]

Identifier: 15668341

GI number: 15668341

Start: 171241

End: 172032

Strand: Direct

Name: minD [C]

Synonym: MJ0169

Alternate gene names: 15668341

Gene position: 171241-172032 (Clockwise)

Preceding gene: 15668334

Following gene: 15668345

Centisome position: 10.28

GC content: 32.7

Gene sequence:

>792_bases
GTGATATTTATGATAATTACTATAGCTTCGGGTAAAGGAGGGGTTGGAAAAACTACAACATCAGCATCTTTAGCAGTAGC
ACTTGCTAAATTGGGAAAAAAGGTTTTAGCTATTGATGGAGACATATCAATGGCTAATTTAGGGATTCTATTCAATATGG
AAAAGAAAAAACCCTCTTTACATGAAGTTTTGAGTGAAGAGGCAGATGTTAGGGATGCAATTTACAAACATAAAACTGGA
GTTTATGTATTGCCAACGAGTTTGTCTTTAGAAGGTTATAAGAAATCAGATATTGATTTACTTCCAGATGTGGTTAATGA
GGTAGCTGATGATTTTGATTATGTAATTATAGATGCTCCAGCTGGGTTAAATAGAGAAATGGCTACTCATTTAGCTATTG
CTGATAAACTTTTACTTGTTGTCACCCCAGAGATGTTCTCAATTATTGACGCTGTTAGATTAAAAGAAAGTGCTGAAATG
GCTGGAACACCTTTAATGGGTGTTGTGTTAAATAGGGTTGGTAGAGATTTTGGTGAAATGGGTAGAGATGAGATTGAAAT
GTTAATAAAAGGTAAAGTTTTAGTTGAAGTCCCTGAAGATGAAAATGTTAGGTCAGCAGCTTTAAAAAAGATGAGTGTTA
TTGAATATAGAAAGAATTCTCCAGCTTCTCAAGCTTATATGAAGTTAGCTTCAATAATAGCAGGAGTTCCTATTTACATT
GAAGATGAAATTAAAATAATAAGGAAAGAAAGCTTTATAGATAAAATTAAGAGATTATTTAGGATGTATTAA

Upstream 100 bases:

>100_bases
TGACACTAAAATTATAAAAAACACTATTTATAATGTATGTCACAAATTTAAAATATAATTTTATGAAAGATAGATAAACA
TAAATTAATAGAGTTTAATT

Downstream 100 bases:

>100_bases
TTATCTTGATTTAAAAATTTTAATTATCATCCTTTTCCAAATAAACCGTATATGTTGGGAACGCCCTCTCAATGAACCTT
TCAGTAAAAGCTTCACCAAA

Product: cell division inhibitor MinD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MIFMIITIASGKGGVGKTTTSASLAVALAKLGKKVLAIDGDISMANLGILFNMEKKKPSLHEVLSEEADVRDAIYKHKTG
VYVLPTSLSLEGYKKSDIDLLPDVVNEVADDFDYVIIDAPAGLNREMATHLAIADKLLLVVTPEMFSIIDAVRLKESAEM
AGTPLMGVVLNRVGRDFGEMGRDEIEMLIKGKVLVEVPEDENVRSAALKKMSVIEYRKNSPASQAYMKLASIIAGVPIYI
EDEIKIIRKESFIDKIKRLFRMY

Sequences:

>Translated_263_residues
MIFMIITIASGKGGVGKTTTSASLAVALAKLGKKVLAIDGDISMANLGILFNMEKKKPSLHEVLSEEADVRDAIYKHKTG
VYVLPTSLSLEGYKKSDIDLLPDVVNEVADDFDYVIIDAPAGLNREMATHLAIADKLLLVVTPEMFSIIDAVRLKESAEM
AGTPLMGVVLNRVGRDFGEMGRDEIEMLIKGKVLVEVPEDENVRSAALKKMSVIEYRKNSPASQAYMKLASIIAGVPIYI
EDEIKIIRKESFIDKIKRLFRMY
>Mature_263_residues
MIFMIITIASGKGGVGKTTTSASLAVALAKLGKKVLAIDGDISMANLGILFNMEKKKPSLHEVLSEEADVRDAIYKHKTG
VYVLPTSLSLEGYKKSDIDLLPDVVNEVADDFDYVIIDAPAGLNREMATHLAIADKLLLVVTPEMFSIIDAVRLKESAEM
AGTPLMGVVLNRVGRDFGEMGRDEIEMLIKGKVLVEVPEDENVRSAALKKMSVIEYRKNSPASQAYMKLASIIAGVPIYI
EDEIKIIRKESFIDKIKRLFRMY

Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest

COG id: COG0455

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787423, Length=283, Percent_Identity=31.4487632508834, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): Y169_METJA (Q57633)

Other databases:

- EMBL:   L77117
- PIR:   B64321
- RefSeq:   NP_247137.1
- ProteinModelPortal:   Q57633
- SMR:   Q57633
- GeneID:   1451016
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0169
- NMPDR:   fig|243232.1.peg.174
- TIGR:   MJ0169
- HOGENOM:   HBG691818
- OMA:   NREMATH
- ProtClustDB:   CLSK876098
- BioCyc:   MJAN243232:MJ_0169-MONOMER
- InterPro:   IPR010224
- InterPro:   IPR002586
- TIGRFAMs:   TIGR01969

Pfam domain/function: PF01656 CbiA

EC number: NA

Molecular weight: Translated: 28950; Mature: 28950

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFMIITIASGKGGVGKTTTSASLAVALAKLGKKVLAIDGDISMANLGILFNMEKKKPSL
CEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEEEEEEEECCCCCHH
HEVLSEEADVRDAIYKHKTGVYVLPTSLSLEGYKKSDIDLLPDVVNEVADDFDYVIIDAP
HHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECC
AGLNREMATHLAIADKLLLVVTPEMFSIIDAVRLKESAEMAGTPLMGVVLNRVGRDFGEM
CCCCHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GRDEIEMLIKGKVLVEVPEDENVRSAALKKMSVIEYRKNSPASQAYMKLASIIAGVPIYI
CHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE
EDEIKIIRKESFIDKIKRLFRMY
CCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFMIITIASGKGGVGKTTTSASLAVALAKLGKKVLAIDGDISMANLGILFNMEKKKPSL
CEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEEEEEEEECCCCCHH
HEVLSEEADVRDAIYKHKTGVYVLPTSLSLEGYKKSDIDLLPDVVNEVADDFDYVIIDAP
HHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECC
AGLNREMATHLAIADKLLLVVTPEMFSIIDAVRLKESAEMAGTPLMGVVLNRVGRDFGEM
CCCCHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GRDEIEMLIKGKVLVEVPEDENVRSAALKKMSVIEYRKNSPASQAYMKLASIIAGVPIYI
CHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE
EDEIKIIRKESFIDKIKRLFRMY
CCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087