Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668296

Identifier: 15668296

GI number: 15668296

Start: 123027

End: 123377

Strand: Reverse

Name: 15668296

Synonym: MJ0125

Alternate gene names: NA

Gene position: 123377-123027 (Counterclockwise)

Preceding gene: 15668297

Following gene: 298575366

Centisome position: 7.41

GC content: 28.77

Gene sequence:

>351_bases
ATGCCGAAGAGAGATATAAAGGCATTTTTATATGATATTTTATCCTACATGGATGATATAATTAACTTCACTAAAGATAT
GGATTATGAGGAGTTTATAAACAATAAAGCAATAAAATACGCAGTTATTAGATGCTTAGAAGTTATTGGAGAGGCAGTTA
AAAAGATACCAAAGGATATTAGAGAAAAATATCCACACATCCCATTTAAAGAATTGGCTGGAATGAGGGATAAATTAATC
CACCAATATTTTGGTGTAGATTATTTAACAGTTTGGGAAACTGCAAAATATGAAATTCCAGAGATAAAGAAAGAGTTTGA
AAAGATTATAAAAGACCTTGAAGAAAAATAA

Upstream 100 bases:

>100_bases
TTGGAAATTAAAGTTGATTTAATTACAAAAAACTCTATTCACAACCCTTATGTAAAAAAATCCATTGAAGAAGATTTAAT
TTATATTTAATGGTGGTTAA

Downstream 100 bases:

>100_bases
ATATTGATTCTTTGATTATTCTAATGTGGGGATTATTATGATAAGAGAAGAATATTTAGATGTTGAGAATATAAAAGAAA
AACTTCAAGAAATTGGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MPKRDIKAFLYDILSYMDDIINFTKDMDYEEFINNKAIKYAVIRCLEVIGEAVKKIPKDIREKYPHIPFKELAGMRDKLI
HQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDLEEK

Sequences:

>Translated_116_residues
MPKRDIKAFLYDILSYMDDIINFTKDMDYEEFINNKAIKYAVIRCLEVIGEAVKKIPKDIREKYPHIPFKELAGMRDKLI
HQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDLEEK
>Mature_115_residues
PKRDIKAFLYDILSYMDDIINFTKDMDYEEFINNKAIKYAVIRCLEVIGEAVKKIPKDIREKYPHIPFKELAGMRDKLIH
QYFGVDYLTVWETAKYEIPEIKKEFEKIIKDLEEK

Specific function: Unknown

COG id: COG2361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0331 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008201 [H]

Pfam domain/function: PF01934 DUF86 [H]

EC number: NA

Molecular weight: Translated: 13971; Mature: 13839

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRDIKAFLYDILSYMDDIINFTKDMDYEEFINNKAIKYAVIRCLEVIGEAVKKIPKDI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
REKYPHIPFKELAGMRDKLIHQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDLEEK
HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKRDIKAFLYDILSYMDDIINFTKDMDYEEFINNKAIKYAVIRCLEVIGEAVKKIPKDI
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
REKYPHIPFKELAGMRDKLIHQYFGVDYLTVWETAKYEIPEIKKEFEKIIKDLEEK
HHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]