Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 298575366

Identifier: 298575366

GI number: 298575366

Start: 119511

End: 122738

Strand: Reverse

Name: 298575366

Synonym: NA

Alternate gene names: NA

Gene position: 122738-119511 (Counterclockwise)

Preceding gene: 15668296

Following gene: 15668295

Centisome position: 7.37

GC content: 26.55

Gene sequence:

>3228_bases
TTGGACTACCTAAAATACGGTATTGAAGTTGTAGTTAAAAAAAGTGAAAAAAGAAAATTTAAACTCATTGATTATAAAAA
TATAGATAAAAATACATTTTTTTATTTATGCGAAGCAGAATTTAAAGGAAATCCAAAAAATTCAAGACCTGATATAACTT
TGTTCATTAACGGAATCCCTGTTGTAATAATAGAGGCAAAGGCAACATTAAAAATTGACTCTCATTTAGAAGGAATAAGC
CAAATAAGAAGATATGAAAAATTTAGCCCTGATTTATTTAGGTTCGTTCAGTTTGCAATATCTTATGGAGAAGAGCAGTT
ATATACTCCAACAATGCCAAACTGGTATAAAGAAAATATACACTTACCAGCATACTATTGGAGAATTAGACAAAAAATTA
ATGGAAAAAAGGTTGTTAAAGATGACATCTTCTATATCTTAAATCCAAGCATATTGCTTGAAATAATAAGATACTTCATA
TTTTACAGAAAAGACGAATACAGCAAAACAAAAACTTTAAGCAAAATCATCGCAAGATACAACCAATACTTTGCCACAAA
GAAGGCAATGAAAAGAATAGATGAATATTTAAGTGGAGACAGTAAAAATAAGGGTTTAATTTGGCACTGGCAGGGTAGTG
GAAAAACTTACACTATGTTTTTTATAGCAAATTATTTTTTAGACAAATACTTCTCAGAAAATCCTGTTATTTTCTTTGTA
GTTGATAGGGTTGATTTAGAAAGGCAGAGTAAAGAGTTTTATGAAGCAATCCAAGAGAAAAAATTTAAAACCATTTTAAA
AAGAATTGACAGCATAAATAAGCTTTATGAAGTCATAAAATCAATAAAAATGAGTGAATTAAGTAATAAAGTTATTGTTA
GGGGTATTTACACAACAACAATACAAAAATTTCAATATGAAAGAAGTAAAAAAGAAAAGGATAATAATAAGGAAAAGGAT
AAAGATGACGAAGATTTGGATTTATCAAAACCCATTGAAGAGATTATCAAAAAAATTGAAGATAAATTAAAAAAAGAAGA
AAAAGAAGGAAAAATAAAAGGATTAAAAGACCTTTTAATAATATTGGCATTCATATATCTAAAACATCTAAAAGAAAAAA
ACCCTGAAGAATATAAAAAACATATAGAAAACCTAAAAAAACTAAAAGATAAAGATAAAAAAGAAGAATACCTAATAAAC
TTAGGAAATATCAAAAGAAAACATATTCTAATACTGATAGATGAAGCTCACAGAACACAATACGGAATTTTGGGAGGTAT
GAGAAAAATAACATTTCCAAATGCCATTACATTTGGATTTACAGGAACACCAGTATTTAAAAATGAAAAAAACACATTTA
CAGAATTTTCGTATCCAGAAAAGGGAGAGTTTTATTTAGATGTGTATTTCATAGGAGATTCCATAAAAGACAAATTTACC
CTCCCATTAACTTATCAAATTGTAAAAGAAGGAGATATCAAATCAGAAGGAATTCAAATTACATTGGATGAAGAAGATAT
AAAAGAATTTATTGATGAGTGGATTAAAAGGGGGGAAGATATTAACCTATTTGATAGAAAAAAACTTCCAAAATATATAA
ATAAATCAAAAACAATTTTATTAAACCCCAAAAGAATTGATAAAGTTGCAAAATATATAGTTGATAGGATAGAAGAAGAT
ACTGAAAACTTCAAATTTAAGGCAATGGTTGTTGCAGTCAATAGATTGGGGTGTGTTAGATTTAAAAAAGCACTTGATAA
GTATTTAAAAGAAAAGTTTGGAGATGAGGCAGAGAAATGGGCTGAAGTTGTGATGACATATCACCACAACGAAGAAGAGA
AAGAAATTATTGAATACATGAAAAAACTTAAAAAAGAAAGAAATTCTAACGATTTTAATGAGATTAACCAAATTATTAGA
GAAGAATTCTTAAATTCAGAAAATCCAAAAATTTTGATAGTTACAGATATGCTTTTAACAGGCTTTGACGCTCCAAGATT
AAAGGTTATGTATTTGGATAAACCACTGTATGGGCATAGATTACTACAAGCAATAGCAAGAACTAACAGACCATATCCAG
ACAAAGAATTTGGTTTAATAGTTGATTCTGTTGGATTATTTAAAGTTTTAACCGAAACTATGGCATTATACAACATGTTG
GCGGAGGAAGAGATTAGGGAAGATTTCAAAAACAATTTAATTAGTTCAATTGATGAGATTTTCCAAGAATTTAAATTAAA
GTTAGAAATGGTTAAAGAATCATTAAAAAATTTAAAAATTAACGATGAGGATTTAAGCATAGATGTAAATACTCTTAAAA
CTTTAACAAAAAACAAAGATTTCAATAACAATGAGTTAAAAGAAAAATTGGATTTAATTGCATTTTATGCAGAAGACGGA
AAAAATGCGAGAATTTTAAAGCTTATAGATGATTTAAAAGCAGTAATCAAACTTTATAAAGCATTAGGTTCTTATCCACA
AAAGATTTTTTATATTGAGGATATTGAACTTCTATCCTTCATATATGCTTACTTAATAAAAAAACTAAAGCCAAAAAAGA
AATCAAATAGAAAATTCTGGGAGGAATTAATATCATTTATACACAATAAAATGCTTGTTGATGATTTAACTGTAATTGAA
GAGATAAATCTCAACCCTGATGATTTAGATAAGATTTTAAAAGAAAATATTGGAAAGAGAGAGATAAAAAGAGCAGTAGC
AAATTACTATTTTATTTTAAAAAATAGCATCTTAGATAAACAGCACGACCCAATATATAAGGAAATATTAGAAAGATTGG
AAAGATTAAGAAGAGACTGGATTATGAAGAGGATAGATGACAAAATTTATTTGAACGCCATAAAAAACCTTATGGAATTA
AAAAACAACTACGATAAAAAAATAAAAGGAAAATCATCAATTGAAAGAATAAAAGAATCAATAAGCACCTATATAGGCGA
AAATATATTAAAAGACCAAGATATTAAATTGAACTTAGAAAATACTGAAAAACTAATTACTAAAATGCAAAATTTAAATA
AATTATCAAAATTACAAAGAAAAAAATTCAAAAAAGAATTGTCATGTGCATTACTTGAAGATTTATTAAAAGAGCTAAAA
GGAAAAATTAAAGATGAAGACGCTAAAAAAGTGGCTGAATTATCAGATAATTTAGTTTCTGAATTCATCTTAAAAGAAAT
ATGGGGAGAGAATTATGAAAATCAATGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: Type I restriction-modification enzyme helicase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1075; Mature: 1075

Protein sequence:
NA

Sequences:

>Translated_1075_residues
MDYLKYGIEVVVKKSEKRKFKLIDYKNIDKNTFFYLCEAEFKGNPKNSRPDITLFINGIPVVIIEAKATLKIDSHLEGIS
QIRRYEKFSPDLFRFVQFAISYGEEQLYTPTMPNWYKENIHLPAYYWRIRQKINGKKVVKDDIFYILNPSILLEIIRYFI
FYRKDEYSKTKTLSKIIARYNQYFATKKAMKRIDEYLSGDSKNKGLIWHWQGSGKTYTMFFIANYFLDKYFSENPVIFFV
VDRVDLERQSKEFYEAIQEKKFKTILKRIDSINKLYEVIKSIKMSELSNKVIVRGIYTTTIQKFQYERSKKEKDNNKEKD
KDDEDLDLSKPIEEIIKKIEDKLKKEEKEGKIKGLKDLLIILAFIYLKHLKEKNPEEYKKHIENLKKLKDKDKKEEYLIN
LGNIKRKHILILIDEAHRTQYGILGGMRKITFPNAITFGFTGTPVFKNEKNTFTEFSYPEKGEFYLDVYFIGDSIKDKFT
LPLTYQIVKEGDIKSEGIQITLDEEDIKEFIDEWIKRGEDINLFDRKKLPKYINKSKTILLNPKRIDKVAKYIVDRIEED
TENFKFKAMVVAVNRLGCVRFKKALDKYLKEKFGDEAEKWAEVVMTYHHNEEEKEIIEYMKKLKKERNSNDFNEINQIIR
EEFLNSENPKILIVTDMLLTGFDAPRLKVMYLDKPLYGHRLLQAIARTNRPYPDKEFGLIVDSVGLFKVLTETMALYNML
AEEEIREDFKNNLISSIDEIFQEFKLKLEMVKESLKNLKINDEDLSIDVNTLKTLTKNKDFNNNELKEKLDLIAFYAEDG
KNARILKLIDDLKAVIKLYKALGSYPQKIFYIEDIELLSFIYAYLIKKLKPKKKSNRKFWEELISFIHNKMLVDDLTVIE
EINLNPDDLDKILKENIGKREIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAIKNLMEL
KNNYDKKIKGKSSIERIKESISTYIGENILKDQDIKLNLENTEKLITKMQNLNKLSKLQRKKFKKELSCALLEDLLKELK
GKIKDEDAKKVAELSDNLVSEFILKEIWGENYENQ
>Mature_1075_residues
MDYLKYGIEVVVKKSEKRKFKLIDYKNIDKNTFFYLCEAEFKGNPKNSRPDITLFINGIPVVIIEAKATLKIDSHLEGIS
QIRRYEKFSPDLFRFVQFAISYGEEQLYTPTMPNWYKENIHLPAYYWRIRQKINGKKVVKDDIFYILNPSILLEIIRYFI
FYRKDEYSKTKTLSKIIARYNQYFATKKAMKRIDEYLSGDSKNKGLIWHWQGSGKTYTMFFIANYFLDKYFSENPVIFFV
VDRVDLERQSKEFYEAIQEKKFKTILKRIDSINKLYEVIKSIKMSELSNKVIVRGIYTTTIQKFQYERSKKEKDNNKEKD
KDDEDLDLSKPIEEIIKKIEDKLKKEEKEGKIKGLKDLLIILAFIYLKHLKEKNPEEYKKHIENLKKLKDKDKKEEYLIN
LGNIKRKHILILIDEAHRTQYGILGGMRKITFPNAITFGFTGTPVFKNEKNTFTEFSYPEKGEFYLDVYFIGDSIKDKFT
LPLTYQIVKEGDIKSEGIQITLDEEDIKEFIDEWIKRGEDINLFDRKKLPKYINKSKTILLNPKRIDKVAKYIVDRIEED
TENFKFKAMVVAVNRLGCVRFKKALDKYLKEKFGDEAEKWAEVVMTYHHNEEEKEIIEYMKKLKKERNSNDFNEINQIIR
EEFLNSENPKILIVTDMLLTGFDAPRLKVMYLDKPLYGHRLLQAIARTNRPYPDKEFGLIVDSVGLFKVLTETMALYNML
AEEEIREDFKNNLISSIDEIFQEFKLKLEMVKESLKNLKINDEDLSIDVNTLKTLTKNKDFNNNELKEKLDLIAFYAEDG
KNARILKLIDDLKAVIKLYKALGSYPQKIFYIEDIELLSFIYAYLIKKLKPKKKSNRKFWEELISFIHNKMLVDDLTVIE
EINLNPDDLDKILKENIGKREIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAIKNLMEL
KNNYDKKIKGKSSIERIKESISTYIGENILKDQDIKLNLENTEKLITKMQNLNKLSKLQRKKFKKELSCALLEDLLKELK
GKIKDEDAKKVAELSDNLVSEFILKEIWGENYENQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1214

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y124_METJA (Q57588)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_247089.4
- ProteinModelPortal:   Q57588
- REBASE:   3900
- GeneID:   1452609
- GenomeReviews:   L77117_GR
- TIGR:   MJ0124
- HOGENOM:   HBG321554
- OMA:   MVVAVNR
- ProtClustDB:   CLSK227886
- BioCyc:   MJAN243232:MJ_0124-MONOMER
- InterPro:   IPR014001
- InterPro:   IPR004473
- InterPro:   IPR006935
- InterPro:   IPR007409
- SMART:   SM00487
- TIGRFAMs:   TIGR00348

Pfam domain/function: PF04313 HSDR_N; PF04851 ResIII

EC number: NA

Molecular weight: Translated: 127798; Mature: 127798

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYLKYGIEVVVKKSEKRKFKLIDYKNIDKNTFFYLCEAEFKGNPKNSRPDITLFINGIP
CCHHHHHHHHEEECCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCC
VVIIEAKATLKIDSHLEGISQIRRYEKFSPDLFRFVQFAISYGEEQLYTPTMPNWYKENI
EEEEECCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC
HLPAYYWRIRQKINGKKVVKDDIFYILNPSILLEIIRYFIFYRKDEYSKTKTLSKIIARY
CCHHHHHHHHHHCCCCEEHHHCHHHEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NQYFATKKAMKRIDEYLSGDSKNKGLIWHWQGSGKTYTMFFIANYFLDKYFSENPVIFFV
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHCCCCCEEEEE
VDRVDLERQSKEFYEAIQEKKFKTILKRIDSINKLYEVIKSIKMSELSNKVIVRGIYTTT
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
IQKFQYERSKKEKDNNKEKDKDDEDLDLSKPIEEIIKKIEDKLKKEEKEGKIKGLKDLLI
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ILAFIYLKHLKEKNPEEYKKHIENLKKLKDKDKKEEYLINLGNIKRKHILILIDEAHRTQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEEEECCCCHH
YGILGGMRKITFPNAITFGFTGTPVFKNEKNTFTEFSYPEKGEFYLDVYFIGDSIKDKFT
HHHHCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEE
LPLTYQIVKEGDIKSEGIQITLDEEDIKEFIDEWIKRGEDINLFDRKKLPKYINKSKTIL
CCEEEEEHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE
LNPKRIDKVAKYIVDRIEEDTENFKFKAMVVAVNRLGCVRFKKALDKYLKEKFGDEAEKW
ECHHHHHHHHHHHHHHHHHHHHCCEEEHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AEVVMTYHHNEEEKEIIEYMKKLKKERNSNDFNEINQIIREEFLNSENPKILIVTDMLLT
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHH
GFDAPRLKVMYLDKPLYGHRLLQAIARTNRPYPDKEFGLIVDSVGLFKVLTETMALYNML
CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AEEEIREDFKNNLISSIDEIFQEFKLKLEMVKESLKNLKINDEDLSIDVNTLKTLTKNKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCC
FNNNELKEKLDLIAFYAEDGKNARILKLIDDLKAVIKLYKALGSYPQKIFYIEDIELLSF
CCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
IYAYLIKKLKPKKKSNRKFWEELISFIHNKMLVDDLTVIEEINLNPDDLDKILKENIGKR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
EIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAIKNLMEL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
KNNYDKKIKGKSSIERIKESISTYIGENILKDQDIKLNLENTEKLITKMQNLNKLSKLQR
HHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH
KKFKKELSCALLEDLLKELKGKIKDEDAKKVAELSDNLVSEFILKEIWGENYENQ
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDYLKYGIEVVVKKSEKRKFKLIDYKNIDKNTFFYLCEAEFKGNPKNSRPDITLFINGIP
CCHHHHHHHHEEECCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCC
VVIIEAKATLKIDSHLEGISQIRRYEKFSPDLFRFVQFAISYGEEQLYTPTMPNWYKENI
EEEEECCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC
HLPAYYWRIRQKINGKKVVKDDIFYILNPSILLEIIRYFIFYRKDEYSKTKTLSKIIARY
CCHHHHHHHHHHCCCCEEHHHCHHHEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NQYFATKKAMKRIDEYLSGDSKNKGLIWHWQGSGKTYTMFFIANYFLDKYFSENPVIFFV
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHCCCCCEEEEE
VDRVDLERQSKEFYEAIQEKKFKTILKRIDSINKLYEVIKSIKMSELSNKVIVRGIYTTT
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
IQKFQYERSKKEKDNNKEKDKDDEDLDLSKPIEEIIKKIEDKLKKEEKEGKIKGLKDLLI
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ILAFIYLKHLKEKNPEEYKKHIENLKKLKDKDKKEEYLINLGNIKRKHILILIDEAHRTQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEEEECCCCHH
YGILGGMRKITFPNAITFGFTGTPVFKNEKNTFTEFSYPEKGEFYLDVYFIGDSIKDKFT
HHHHCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEE
LPLTYQIVKEGDIKSEGIQITLDEEDIKEFIDEWIKRGEDINLFDRKKLPKYINKSKTIL
CCEEEEEHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE
LNPKRIDKVAKYIVDRIEEDTENFKFKAMVVAVNRLGCVRFKKALDKYLKEKFGDEAEKW
ECHHHHHHHHHHHHHHHHHHHHCCEEEHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AEVVMTYHHNEEEKEIIEYMKKLKKERNSNDFNEINQIIREEFLNSENPKILIVTDMLLT
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHH
GFDAPRLKVMYLDKPLYGHRLLQAIARTNRPYPDKEFGLIVDSVGLFKVLTETMALYNML
CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AEEEIREDFKNNLISSIDEIFQEFKLKLEMVKESLKNLKINDEDLSIDVNTLKTLTKNKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCC
FNNNELKEKLDLIAFYAEDGKNARILKLIDDLKAVIKLYKALGSYPQKIFYIEDIELLSF
CCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
IYAYLIKKLKPKKKSNRKFWEELISFIHNKMLVDDLTVIEEINLNPDDLDKILKENIGKR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
EIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAIKNLMEL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
KNNYDKKIKGKSSIERIKESISTYIGENILKDQDIKLNLENTEKLITKMQNLNKLSKLQR
HHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH
KKFKKELSCALLEDLLKELKGKIKDEDAKKVAELSDNLVSEFILKEIWGENYENQ
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087