| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 298575366
Identifier: 298575366
GI number: 298575366
Start: 119511
End: 122738
Strand: Reverse
Name: 298575366
Synonym: NA
Alternate gene names: NA
Gene position: 122738-119511 (Counterclockwise)
Preceding gene: 15668296
Following gene: 15668295
Centisome position: 7.37
GC content: 26.55
Gene sequence:
>3228_bases TTGGACTACCTAAAATACGGTATTGAAGTTGTAGTTAAAAAAAGTGAAAAAAGAAAATTTAAACTCATTGATTATAAAAA TATAGATAAAAATACATTTTTTTATTTATGCGAAGCAGAATTTAAAGGAAATCCAAAAAATTCAAGACCTGATATAACTT TGTTCATTAACGGAATCCCTGTTGTAATAATAGAGGCAAAGGCAACATTAAAAATTGACTCTCATTTAGAAGGAATAAGC CAAATAAGAAGATATGAAAAATTTAGCCCTGATTTATTTAGGTTCGTTCAGTTTGCAATATCTTATGGAGAAGAGCAGTT ATATACTCCAACAATGCCAAACTGGTATAAAGAAAATATACACTTACCAGCATACTATTGGAGAATTAGACAAAAAATTA ATGGAAAAAAGGTTGTTAAAGATGACATCTTCTATATCTTAAATCCAAGCATATTGCTTGAAATAATAAGATACTTCATA TTTTACAGAAAAGACGAATACAGCAAAACAAAAACTTTAAGCAAAATCATCGCAAGATACAACCAATACTTTGCCACAAA GAAGGCAATGAAAAGAATAGATGAATATTTAAGTGGAGACAGTAAAAATAAGGGTTTAATTTGGCACTGGCAGGGTAGTG GAAAAACTTACACTATGTTTTTTATAGCAAATTATTTTTTAGACAAATACTTCTCAGAAAATCCTGTTATTTTCTTTGTA GTTGATAGGGTTGATTTAGAAAGGCAGAGTAAAGAGTTTTATGAAGCAATCCAAGAGAAAAAATTTAAAACCATTTTAAA AAGAATTGACAGCATAAATAAGCTTTATGAAGTCATAAAATCAATAAAAATGAGTGAATTAAGTAATAAAGTTATTGTTA GGGGTATTTACACAACAACAATACAAAAATTTCAATATGAAAGAAGTAAAAAAGAAAAGGATAATAATAAGGAAAAGGAT AAAGATGACGAAGATTTGGATTTATCAAAACCCATTGAAGAGATTATCAAAAAAATTGAAGATAAATTAAAAAAAGAAGA AAAAGAAGGAAAAATAAAAGGATTAAAAGACCTTTTAATAATATTGGCATTCATATATCTAAAACATCTAAAAGAAAAAA ACCCTGAAGAATATAAAAAACATATAGAAAACCTAAAAAAACTAAAAGATAAAGATAAAAAAGAAGAATACCTAATAAAC TTAGGAAATATCAAAAGAAAACATATTCTAATACTGATAGATGAAGCTCACAGAACACAATACGGAATTTTGGGAGGTAT GAGAAAAATAACATTTCCAAATGCCATTACATTTGGATTTACAGGAACACCAGTATTTAAAAATGAAAAAAACACATTTA CAGAATTTTCGTATCCAGAAAAGGGAGAGTTTTATTTAGATGTGTATTTCATAGGAGATTCCATAAAAGACAAATTTACC CTCCCATTAACTTATCAAATTGTAAAAGAAGGAGATATCAAATCAGAAGGAATTCAAATTACATTGGATGAAGAAGATAT AAAAGAATTTATTGATGAGTGGATTAAAAGGGGGGAAGATATTAACCTATTTGATAGAAAAAAACTTCCAAAATATATAA ATAAATCAAAAACAATTTTATTAAACCCCAAAAGAATTGATAAAGTTGCAAAATATATAGTTGATAGGATAGAAGAAGAT ACTGAAAACTTCAAATTTAAGGCAATGGTTGTTGCAGTCAATAGATTGGGGTGTGTTAGATTTAAAAAAGCACTTGATAA GTATTTAAAAGAAAAGTTTGGAGATGAGGCAGAGAAATGGGCTGAAGTTGTGATGACATATCACCACAACGAAGAAGAGA AAGAAATTATTGAATACATGAAAAAACTTAAAAAAGAAAGAAATTCTAACGATTTTAATGAGATTAACCAAATTATTAGA GAAGAATTCTTAAATTCAGAAAATCCAAAAATTTTGATAGTTACAGATATGCTTTTAACAGGCTTTGACGCTCCAAGATT AAAGGTTATGTATTTGGATAAACCACTGTATGGGCATAGATTACTACAAGCAATAGCAAGAACTAACAGACCATATCCAG ACAAAGAATTTGGTTTAATAGTTGATTCTGTTGGATTATTTAAAGTTTTAACCGAAACTATGGCATTATACAACATGTTG GCGGAGGAAGAGATTAGGGAAGATTTCAAAAACAATTTAATTAGTTCAATTGATGAGATTTTCCAAGAATTTAAATTAAA GTTAGAAATGGTTAAAGAATCATTAAAAAATTTAAAAATTAACGATGAGGATTTAAGCATAGATGTAAATACTCTTAAAA CTTTAACAAAAAACAAAGATTTCAATAACAATGAGTTAAAAGAAAAATTGGATTTAATTGCATTTTATGCAGAAGACGGA AAAAATGCGAGAATTTTAAAGCTTATAGATGATTTAAAAGCAGTAATCAAACTTTATAAAGCATTAGGTTCTTATCCACA AAAGATTTTTTATATTGAGGATATTGAACTTCTATCCTTCATATATGCTTACTTAATAAAAAAACTAAAGCCAAAAAAGA AATCAAATAGAAAATTCTGGGAGGAATTAATATCATTTATACACAATAAAATGCTTGTTGATGATTTAACTGTAATTGAA GAGATAAATCTCAACCCTGATGATTTAGATAAGATTTTAAAAGAAAATATTGGAAAGAGAGAGATAAAAAGAGCAGTAGC AAATTACTATTTTATTTTAAAAAATAGCATCTTAGATAAACAGCACGACCCAATATATAAGGAAATATTAGAAAGATTGG AAAGATTAAGAAGAGACTGGATTATGAAGAGGATAGATGACAAAATTTATTTGAACGCCATAAAAAACCTTATGGAATTA AAAAACAACTACGATAAAAAAATAAAAGGAAAATCATCAATTGAAAGAATAAAAGAATCAATAAGCACCTATATAGGCGA AAATATATTAAAAGACCAAGATATTAAATTGAACTTAGAAAATACTGAAAAACTAATTACTAAAATGCAAAATTTAAATA AATTATCAAAATTACAAAGAAAAAAATTCAAAAAAGAATTGTCATGTGCATTACTTGAAGATTTATTAAAAGAGCTAAAA GGAAAAATTAAAGATGAAGACGCTAAAAAAGTGGCTGAATTATCAGATAATTTAGTTTCTGAATTCATCTTAAAAGAAAT ATGGGGAGAGAATTATGAAAATCAATGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: Type I restriction-modification enzyme helicase subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1075; Mature: 1075
Protein sequence:
NA
Sequences:
>Translated_1075_residues MDYLKYGIEVVVKKSEKRKFKLIDYKNIDKNTFFYLCEAEFKGNPKNSRPDITLFINGIPVVIIEAKATLKIDSHLEGIS QIRRYEKFSPDLFRFVQFAISYGEEQLYTPTMPNWYKENIHLPAYYWRIRQKINGKKVVKDDIFYILNPSILLEIIRYFI FYRKDEYSKTKTLSKIIARYNQYFATKKAMKRIDEYLSGDSKNKGLIWHWQGSGKTYTMFFIANYFLDKYFSENPVIFFV VDRVDLERQSKEFYEAIQEKKFKTILKRIDSINKLYEVIKSIKMSELSNKVIVRGIYTTTIQKFQYERSKKEKDNNKEKD KDDEDLDLSKPIEEIIKKIEDKLKKEEKEGKIKGLKDLLIILAFIYLKHLKEKNPEEYKKHIENLKKLKDKDKKEEYLIN LGNIKRKHILILIDEAHRTQYGILGGMRKITFPNAITFGFTGTPVFKNEKNTFTEFSYPEKGEFYLDVYFIGDSIKDKFT LPLTYQIVKEGDIKSEGIQITLDEEDIKEFIDEWIKRGEDINLFDRKKLPKYINKSKTILLNPKRIDKVAKYIVDRIEED TENFKFKAMVVAVNRLGCVRFKKALDKYLKEKFGDEAEKWAEVVMTYHHNEEEKEIIEYMKKLKKERNSNDFNEINQIIR EEFLNSENPKILIVTDMLLTGFDAPRLKVMYLDKPLYGHRLLQAIARTNRPYPDKEFGLIVDSVGLFKVLTETMALYNML AEEEIREDFKNNLISSIDEIFQEFKLKLEMVKESLKNLKINDEDLSIDVNTLKTLTKNKDFNNNELKEKLDLIAFYAEDG KNARILKLIDDLKAVIKLYKALGSYPQKIFYIEDIELLSFIYAYLIKKLKPKKKSNRKFWEELISFIHNKMLVDDLTVIE EINLNPDDLDKILKENIGKREIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAIKNLMEL KNNYDKKIKGKSSIERIKESISTYIGENILKDQDIKLNLENTEKLITKMQNLNKLSKLQRKKFKKELSCALLEDLLKELK GKIKDEDAKKVAELSDNLVSEFILKEIWGENYENQ >Mature_1075_residues MDYLKYGIEVVVKKSEKRKFKLIDYKNIDKNTFFYLCEAEFKGNPKNSRPDITLFINGIPVVIIEAKATLKIDSHLEGIS QIRRYEKFSPDLFRFVQFAISYGEEQLYTPTMPNWYKENIHLPAYYWRIRQKINGKKVVKDDIFYILNPSILLEIIRYFI FYRKDEYSKTKTLSKIIARYNQYFATKKAMKRIDEYLSGDSKNKGLIWHWQGSGKTYTMFFIANYFLDKYFSENPVIFFV VDRVDLERQSKEFYEAIQEKKFKTILKRIDSINKLYEVIKSIKMSELSNKVIVRGIYTTTIQKFQYERSKKEKDNNKEKD KDDEDLDLSKPIEEIIKKIEDKLKKEEKEGKIKGLKDLLIILAFIYLKHLKEKNPEEYKKHIENLKKLKDKDKKEEYLIN LGNIKRKHILILIDEAHRTQYGILGGMRKITFPNAITFGFTGTPVFKNEKNTFTEFSYPEKGEFYLDVYFIGDSIKDKFT LPLTYQIVKEGDIKSEGIQITLDEEDIKEFIDEWIKRGEDINLFDRKKLPKYINKSKTILLNPKRIDKVAKYIVDRIEED TENFKFKAMVVAVNRLGCVRFKKALDKYLKEKFGDEAEKWAEVVMTYHHNEEEKEIIEYMKKLKKERNSNDFNEINQIIR EEFLNSENPKILIVTDMLLTGFDAPRLKVMYLDKPLYGHRLLQAIARTNRPYPDKEFGLIVDSVGLFKVLTETMALYNML AEEEIREDFKNNLISSIDEIFQEFKLKLEMVKESLKNLKINDEDLSIDVNTLKTLTKNKDFNNNELKEKLDLIAFYAEDG KNARILKLIDDLKAVIKLYKALGSYPQKIFYIEDIELLSFIYAYLIKKLKPKKKSNRKFWEELISFIHNKMLVDDLTVIE EINLNPDDLDKILKENIGKREIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAIKNLMEL KNNYDKKIKGKSSIERIKESISTYIGENILKDQDIKLNLENTEKLITKMQNLNKLSKLQRKKFKKELSCALLEDLLKELK GKIKDEDAKKVAELSDNLVSEFILKEIWGENYENQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1214
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y124_METJA (Q57588)
Other databases:
- EMBL: L77117 - RefSeq: NP_247089.4 - ProteinModelPortal: Q57588 - REBASE: 3900 - GeneID: 1452609 - GenomeReviews: L77117_GR - TIGR: MJ0124 - HOGENOM: HBG321554 - OMA: MVVAVNR - ProtClustDB: CLSK227886 - BioCyc: MJAN243232:MJ_0124-MONOMER - InterPro: IPR014001 - InterPro: IPR004473 - InterPro: IPR006935 - InterPro: IPR007409 - SMART: SM00487 - TIGRFAMs: TIGR00348
Pfam domain/function: PF04313 HSDR_N; PF04851 ResIII
EC number: NA
Molecular weight: Translated: 127798; Mature: 127798
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYLKYGIEVVVKKSEKRKFKLIDYKNIDKNTFFYLCEAEFKGNPKNSRPDITLFINGIP CCHHHHHHHHEEECCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCC VVIIEAKATLKIDSHLEGISQIRRYEKFSPDLFRFVQFAISYGEEQLYTPTMPNWYKENI EEEEECCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC HLPAYYWRIRQKINGKKVVKDDIFYILNPSILLEIIRYFIFYRKDEYSKTKTLSKIIARY CCHHHHHHHHHHCCCCEEHHHCHHHEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NQYFATKKAMKRIDEYLSGDSKNKGLIWHWQGSGKTYTMFFIANYFLDKYFSENPVIFFV HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHCCCCCEEEEE VDRVDLERQSKEFYEAIQEKKFKTILKRIDSINKLYEVIKSIKMSELSNKVIVRGIYTTT ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH IQKFQYERSKKEKDNNKEKDKDDEDLDLSKPIEEIIKKIEDKLKKEEKEGKIKGLKDLLI HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ILAFIYLKHLKEKNPEEYKKHIENLKKLKDKDKKEEYLINLGNIKRKHILILIDEAHRTQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEEEECCCCHH YGILGGMRKITFPNAITFGFTGTPVFKNEKNTFTEFSYPEKGEFYLDVYFIGDSIKDKFT HHHHCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEE LPLTYQIVKEGDIKSEGIQITLDEEDIKEFIDEWIKRGEDINLFDRKKLPKYINKSKTIL CCEEEEEHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE LNPKRIDKVAKYIVDRIEEDTENFKFKAMVVAVNRLGCVRFKKALDKYLKEKFGDEAEKW ECHHHHHHHHHHHHHHHHHHHHCCEEEHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AEVVMTYHHNEEEKEIIEYMKKLKKERNSNDFNEINQIIREEFLNSENPKILIVTDMLLT HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHH GFDAPRLKVMYLDKPLYGHRLLQAIARTNRPYPDKEFGLIVDSVGLFKVLTETMALYNML CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AEEEIREDFKNNLISSIDEIFQEFKLKLEMVKESLKNLKINDEDLSIDVNTLKTLTKNKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCC FNNNELKEKLDLIAFYAEDGKNARILKLIDDLKAVIKLYKALGSYPQKIFYIEDIELLSF CCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH IYAYLIKKLKPKKKSNRKFWEELISFIHNKMLVDDLTVIEEINLNPDDLDKILKENIGKR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH EIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAIKNLMEL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH KNNYDKKIKGKSSIERIKESISTYIGENILKDQDIKLNLENTEKLITKMQNLNKLSKLQR HHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH KKFKKELSCALLEDLLKELKGKIKDEDAKKVAELSDNLVSEFILKEIWGENYENQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDYLKYGIEVVVKKSEKRKFKLIDYKNIDKNTFFYLCEAEFKGNPKNSRPDITLFINGIP CCHHHHHHHHEEECCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCC VVIIEAKATLKIDSHLEGISQIRRYEKFSPDLFRFVQFAISYGEEQLYTPTMPNWYKENI EEEEECCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC HLPAYYWRIRQKINGKKVVKDDIFYILNPSILLEIIRYFIFYRKDEYSKTKTLSKIIARY CCHHHHHHHHHHCCCCEEHHHCHHHEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NQYFATKKAMKRIDEYLSGDSKNKGLIWHWQGSGKTYTMFFIANYFLDKYFSENPVIFFV HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHCCCCCEEEEE VDRVDLERQSKEFYEAIQEKKFKTILKRIDSINKLYEVIKSIKMSELSNKVIVRGIYTTT ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH IQKFQYERSKKEKDNNKEKDKDDEDLDLSKPIEEIIKKIEDKLKKEEKEGKIKGLKDLLI HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ILAFIYLKHLKEKNPEEYKKHIENLKKLKDKDKKEEYLINLGNIKRKHILILIDEAHRTQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEEEECCCCHH YGILGGMRKITFPNAITFGFTGTPVFKNEKNTFTEFSYPEKGEFYLDVYFIGDSIKDKFT HHHHCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEE LPLTYQIVKEGDIKSEGIQITLDEEDIKEFIDEWIKRGEDINLFDRKKLPKYINKSKTIL CCEEEEEHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE LNPKRIDKVAKYIVDRIEEDTENFKFKAMVVAVNRLGCVRFKKALDKYLKEKFGDEAEKW ECHHHHHHHHHHHHHHHHHHHHCCEEEHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AEVVMTYHHNEEEKEIIEYMKKLKKERNSNDFNEINQIIREEFLNSENPKILIVTDMLLT HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHH GFDAPRLKVMYLDKPLYGHRLLQAIARTNRPYPDKEFGLIVDSVGLFKVLTETMALYNML CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AEEEIREDFKNNLISSIDEIFQEFKLKLEMVKESLKNLKINDEDLSIDVNTLKTLTKNKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCC FNNNELKEKLDLIAFYAEDGKNARILKLIDDLKAVIKLYKALGSYPQKIFYIEDIELLSF CCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH IYAYLIKKLKPKKKSNRKFWEELISFIHNKMLVDDLTVIEEINLNPDDLDKILKENIGKR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH EIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAIKNLMEL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH KNNYDKKIKGKSSIERIKESISTYIGENILKDQDIKLNLENTEKLITKMQNLNKLSKLQR HHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH KKFKKELSCALLEDLLKELKGKIKDEDAKKVAELSDNLVSEFILKEIWGENYENQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087