Click here to switch to the map view.

The map label for this gene is ugpC [C]

Identifier: 15668293

GI number: 15668293

Start: 117067

End: 117852

Strand: Reverse

Name: ugpC [C]

Synonym: MJ0121

Alternate gene names: 15668293

Gene position: 117852-117067 (Counterclockwise)

Preceding gene: 15668294

Following gene: 15668292

Centisome position: 7.08

GC content: 36.64

Gene sequence:

>786_bases
ATGGAAATTAAGGAGATAACAATTATCGGTGGTTATGACAAGAACGGCAATCCAGAACCTGTAAGGGAGGTTACAATAAA
AAGAGGAGAGATTGTCGGTGTTGTTGGGCCAACAGGAAGTGGGAAATCAAATTTAATCAGCGATATAGAGCAGTTAGCTC
AAGGAGATACCATCTCCAAGAGAAGAATTTTAGTTAATGGAGAAGTTCCTCCAATAGAGATGAGAAGAGACCCAAAAAAG
AGAAGAATTGCCCAACTATCTCAAAACATGAATTTTTTAGCAGACATGACTGTAGAGGAGTTTATTTTAATGCATGCGAA
GAGTAGGGGAGTTTATAGAGAAAATATTGTTGATGAAGTCATAGAATTAGCAAATAGATTAACAGGAGAGCCAATAAAGA
AAGACTACAACTTAACAATCCTAAGTGGAGGGCAGTCAAGAAGTTTAATGGTTGCTGATGTAGCTGTAATAAGCGATTCT
CCCATAGTTTTAATAGATGAGATTGAAAACGCTGGAATAAAGAAGCATGAGGCTTTAGAGTTATTGGCAGGATATGGAAA
GATTGTTTTAGTTATAACTCACGACCCTGTCTTGGCTTTAATGACTGATAGAAGGATAGTGATGAGAAACGGAGGAATGC
AGAAGATTATAGAAACTACTGAAGAAGAGAAGGAAATTTCAAGAAAAATAAATGAGGTTGATAACTGGCTACTCTCTTTA
AGAGAAAAGATTAGGTTTGGAGAGAGATTGACTCATGAAGATATAAGCCTAATGGTGAAAGGATGA

Upstream 100 bases:

>100_bases
ATATAAAACTGTTTATCCAATAGTAATTGTAAATAACCTTATAATGTAAATATATATATCAATTTTTCTTATAAGAAAAA
ATAATTTTTAGGATGGGAAT

Downstream 100 bases:

>100_bases
AAGTGGCAATAGTTGCAGGAACCCCTGGAGCTGGAAAGACTTCAGTATTAATTCACACAATAAGAACCTTAATTAATGAA
GGATATAAGCCAGTAGTTGT

Product: SN-glycerol-3-phosphate transport ATP-binding protein UgpC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MEIKEITIIGGYDKNGNPEPVREVTIKRGEIVGVVGPTGSGKSNLISDIEQLAQGDTISKRRILVNGEVPPIEMRRDPKK
RRIAQLSQNMNFLADMTVEEFILMHAKSRGVYRENIVDEVIELANRLTGEPIKKDYNLTILSGGQSRSLMVADVAVISDS
PIVLIDEIENAGIKKHEALELLAGYGKIVLVITHDPVLALMTDRRIVMRNGGMQKIIETTEEEKEISRKINEVDNWLLSL
REKIRFGERLTHEDISLMVKG

Sequences:

>Translated_261_residues
MEIKEITIIGGYDKNGNPEPVREVTIKRGEIVGVVGPTGSGKSNLISDIEQLAQGDTISKRRILVNGEVPPIEMRRDPKK
RRIAQLSQNMNFLADMTVEEFILMHAKSRGVYRENIVDEVIELANRLTGEPIKKDYNLTILSGGQSRSLMVADVAVISDS
PIVLIDEIENAGIKKHEALELLAGYGKIVLVITHDPVLALMTDRRIVMRNGGMQKIIETTEEEKEISRKINEVDNWLLSL
REKIRFGERLTHEDISLMVKG
>Mature_261_residues
MEIKEITIIGGYDKNGNPEPVREVTIKRGEIVGVVGPTGSGKSNLISDIEQLAQGDTISKRRILVNGEVPPIEMRRDPKK
RRIAQLSQNMNFLADMTVEEFILMHAKSRGVYRENIVDEVIELANRLTGEPIKKDYNLTILSGGQSRSLMVADVAVISDS
PIVLIDEIENAGIKKHEALELLAGYGKIVLVITHDPVLALMTDRRIVMRNGGMQKIIETTEEEKEISRKINEVDNWLLSL
REKIRFGERLTHEDISLMVKG

Specific function: Part Of The Binding-Protein-Dependent Transport System For Sn-Glycerol-3-Phosphate. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG1136

COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain

Homologues:

Organism=Escherichia coli, GI87082267, Length=223, Percent_Identity=30.9417040358744, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787105, Length=194, Percent_Identity=28.3505154639175, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y121_METJA (Q57585)

Other databases:

- EMBL:   L77117
- PIR:   A64315
- RefSeq:   NP_247086.1
- ProteinModelPortal:   Q57585
- GeneID:   1450964
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0121
- NMPDR:   fig|243232.1.peg.123
- TIGR:   MJ0121
- HOGENOM:   HBG305787
- OMA:   MAQKDTP
- ProtClustDB:   CLSK876081
- BioCyc:   MJAN243232:MJ_0121-MONOMER
- GO:   GO:0006810
- InterPro:   IPR003439
- InterPro:   IPR003593
- SMART:   SM00382

Pfam domain/function: PF00005 ABC_tran

EC number: NA

Molecular weight: Translated: 29262; Mature: 29262

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKEITIIGGYDKNGNPEPVREVTIKRGEIVGVVGPTGSGKSNLISDIEQLAQGDTISK
CCCEEEEEEECCCCCCCCCHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
RRILVNGEVPPIEMRRDPKKRRIAQLSQNMNFLADMTVEEFILMHAKSRGVYRENIVDEV
CEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IELANRLTGEPIKKDYNLTILSGGQSRSLMVADVAVISDSPIVLIDEIENAGIKKHEALE
HHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHH
LLAGYGKIVLVITHDPVLALMTDRRIVMRNGGMQKIIETTEEEKEISRKINEVDNWLLSL
HHHCCCEEEEEEECCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REKIRFGERLTHEDISLMVKG
HHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MEIKEITIIGGYDKNGNPEPVREVTIKRGEIVGVVGPTGSGKSNLISDIEQLAQGDTISK
CCCEEEEEEECCCCCCCCCHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
RRILVNGEVPPIEMRRDPKKRRIAQLSQNMNFLADMTVEEFILMHAKSRGVYRENIVDEV
CEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IELANRLTGEPIKKDYNLTILSGGQSRSLMVADVAVISDSPIVLIDEIENAGIKKHEALE
HHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHH
LLAGYGKIVLVITHDPVLALMTDRRIVMRNGGMQKIIETTEEEKEISRKINEVDNWLLSL
HHHCCCEEEEEEECCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REKIRFGERLTHEDISLMVKG
HHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087