| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668267
Identifier: 15668267
GI number: 15668267
Start: 89964
End: 90752
Strand: Reverse
Name: 15668267
Synonym: MJ0096
Alternate gene names: NA
Gene position: 90752-89964 (Counterclockwise)
Preceding gene: 15668268
Following gene: 15668266
Centisome position: 5.45
GC content: 28.9
Gene sequence:
>789_bases ATGGAAGTAAAAGCCATGGAGATTTTTAAAAAATATCTCTCTTTAAATATTCCAAAAAAGATTTTAATAACCTATTTTTT GTGTTGGGCAGGATTTCTGTTTTCTTTCTCTGTAGGGAAGTTCCTTTTATATTTATCATCTATTTTAAAATCCAATTTTA TATCTGAACCAGCTAAATTAGCTCAAAGTGTTGGAACTGCAAAATTTAACGCTGTTTCTTCAGCTGTATCGAATACTGTT GGGGTAAAAAATGCTTACTTAACTTATGCTCTTTCATATATAGTTTCTAATTTTATGGGGTGTTTGATTATAATGTTTGC TCTTGGAGCACTTGCTTATTTATATAAGAAAGACTTAGAAAAAGCTAAAACACTTGAAGAGAAAGAAGAACTATTTAAGT GTTATCAAAAATATCTATTAATATTATTTATCTTTACTGTCATAAATCCACTGACTGGATTAATTGGAGTAAATCTTCAA TATTCTGATTTAATTGCTGTCCTTCCACATGGATTTTTTGAATTTTTTGGATTTGCCACTGCAGTCGTTGTTGGAGTAGA ATTATCAAATAAAATTCTCCCAATAGTTAAAAGAGAAATAACAAGTAAAAAAATAGTAATTCTTATAGCTTGTTCCTTTA TATTTATCTTTATTGCTGGAATGTTGGAGCCAATTGACTGGTTTATCTATAGCTATGCAAAAGCTTATGGAATTCCCCTA TTAGCTGCCTTTGCAACTGGGTATAAAAACTTATTTTTGTATCTAATTTCTATGCTTTTTAAATCTTGA
Upstream 100 bases:
>100_bases GCTACAAATCCGTTAGGATTTATTTAACCAAAGCGTAGCTTCGGTAATGAAAACCTAACAGTTTCCATCTAAACGTTTAT AAAAAGTTCCAAGGGAAATC
Downstream 100 bases:
>100_bases GGTGATACGATTAAAGTATTGGCTATAGATATATCTGGAAGGCATCATGAAAATGATATATTTTTTAGAGTTTATGCTGG GGTTTTAGTTGAGATTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MEVKAMEIFKKYLSLNIPKKILITYFLCWAGFLFSFSVGKFLLYLSSILKSNFISEPAKLAQSVGTAKFNAVSSAVSNTV GVKNAYLTYALSYIVSNFMGCLIIMFALGALAYLYKKDLEKAKTLEEKEELFKCYQKYLLILFIFTVINPLTGLIGVNLQ YSDLIAVLPHGFFEFFGFATAVVVGVELSNKILPIVKREITSKKIVILIACSFIFIFIAGMLEPIDWFIYSYAKAYGIPL LAAFATGYKNLFLYLISMLFKS
Sequences:
>Translated_262_residues MEVKAMEIFKKYLSLNIPKKILITYFLCWAGFLFSFSVGKFLLYLSSILKSNFISEPAKLAQSVGTAKFNAVSSAVSNTV GVKNAYLTYALSYIVSNFMGCLIIMFALGALAYLYKKDLEKAKTLEEKEELFKCYQKYLLILFIFTVINPLTGLIGVNLQ YSDLIAVLPHGFFEFFGFATAVVVGVELSNKILPIVKREITSKKIVILIACSFIFIFIAGMLEPIDWFIYSYAKAYGIPL LAAFATGYKNLFLYLISMLFKS >Mature_262_residues MEVKAMEIFKKYLSLNIPKKILITYFLCWAGFLFSFSVGKFLLYLSSILKSNFISEPAKLAQSVGTAKFNAVSSAVSNTV GVKNAYLTYALSYIVSNFMGCLIIMFALGALAYLYKKDLEKAKTLEEKEELFKCYQKYLLILFIFTVINPLTGLIGVNLQ YSDLIAVLPHGFFEFFGFATAVVVGVELSNKILPIVKREITSKKIVILIACSFIFIFIAGMLEPIDWFIYSYAKAYGIPL LAAFATGYKNLFLYLISMLFKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y096_METJA (Q57561)
Other databases:
- EMBL: L77117 - PIR: H64311 - RefSeq: NP_247060.1 - ProteinModelPortal: Q57561 - GeneID: 1450935 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0096 - NMPDR: fig|243232.1.peg.97 - TIGR: MJ0096 - HOGENOM: HBG540384 - OMA: SIWYSYF - ProtClustDB: CLSK876068 - BioCyc: MJAN243232:MJ_0096-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29464; Mature: 29464
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc012cb8)-; HASH(0xc0c1fe8)-; HASH(0xc7289f0)-; HASH(0xbeff900)-; HASH(0xbef5bb0)-; HASH(0xbea262c)-;
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKAMEIFKKYLSLNIPKKILITYFLCWAGFLFSFSVGKFLLYLSSILKSNFISEPAKL CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AQSVGTAKFNAVSSAVSNTVGVKNAYLTYALSYIVSNFMGCLIIMFALGALAYLYKKDLE HHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAKTLEEKEELFKCYQKYLLILFIFTVINPLTGLIGVNLQYSDLIAVLPHGFFEFFGFAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AVVVGVELSNKILPIVKREITSKKIVILIACSFIFIFIAGMLEPIDWFIYSYAKAYGIPL HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LAAFATGYKNLFLYLISMLFKS HHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MEVKAMEIFKKYLSLNIPKKILITYFLCWAGFLFSFSVGKFLLYLSSILKSNFISEPAKL CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AQSVGTAKFNAVSSAVSNTVGVKNAYLTYALSYIVSNFMGCLIIMFALGALAYLYKKDLE HHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAKTLEEKEELFKCYQKYLLILFIFTVINPLTGLIGVNLQYSDLIAVLPHGFFEFFGFAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AVVVGVELSNKILPIVKREITSKKIVILIACSFIFIFIAGMLEPIDWFIYSYAKAYGIPL HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LAAFATGYKNLFLYLISMLFKS HHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087