| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668224
Identifier: 15668224
GI number: 15668224
Start: 53385
End: 54068
Strand: Reverse
Name: 15668224
Synonym: MJ0053
Alternate gene names: NA
Gene position: 54068-53385 (Counterclockwise)
Preceding gene: 15668225
Following gene: 15668223
Centisome position: 3.25
GC content: 27.34
Gene sequence:
>684_bases ATGGGATTAAGTTTTAATGGTGAAAACATGATTATCTTCGGATTATTTGGAAAAACAGGATGTGGAAAGACAGAAATATT AAATGAATTAAAGAAACATCATCCTGTAATAGATATTGAAGAAATTGCAAGAACAAGAGGGAGTATTTTAGGGGATTTAT ATCACTTAAGTATGAGAAGCCAGGAAGAGTTTGACTATCTAATAAATAAAGAAATTGAAAAGGCTAAAAAATTTGGTTAT GCAGTGGTTGAATATGAGGGAAGGAAGATTGGTGGAGAGAAAAAGCTAAAAATTCCTGAGTTGTTGGCTGATATTAAAAA CTATACTTACAAAATCTTAATTGACTGTCCTTATGAATGCCAGATAAACAGATTAGTCTCCATTTATAAGCCAAAAAATG AAAAAGAGAAAGAAATTTTGATAAACAAATTTTTAATATTAAAGGAGAGTTTTAAAAAGCCAGAGATGATTGAAGCAGTT GATAACATCATTGAACTCATAAAACAAGACAAATACTATGAAGCAGCAAAATTAATTGAAGAAAAACTTTATAGAGAACA TTATATGAGAAATGTGAAAAAGATAAAGCCAGATTTAATTGTTTATAATGAGGATGTTAAAAAATCAGCTAAAATAATTG ATGAATTTATTAAGAAAAAATTAAAGGAGCATAATTTAATTTAA
Upstream 100 bases:
>100_bases GCCCTTGATTTAGAAAAATTTTTTTAACAGATATTGTTACAAAACTAAAAACAATAACTGCTATATATCAGCATTTTTAA TAACATATTTATACCCAGAC
Downstream 100 bases:
>100_bases GAGGGAAAACATGGACGAGGGAATTTTAGCTCGGCTAATAACCTTTACAGAGGATGTTGTTTTATGTATTGTTTTAAATG ATGGGAGGAAGATGATAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGLSFNGENMIIFGLFGKTGCGKTEILNELKKHHPVIDIEEIARTRGSILGDLYHLSMRSQEEFDYLINKEIEKAKKFGY AVVEYEGRKIGGEKKLKIPELLADIKNYTYKILIDCPYECQINRLVSIYKPKNEKEKEILINKFLILKESFKKPEMIEAV DNIIELIKQDKYYEAAKLIEEKLYREHYMRNVKKIKPDLIVYNEDVKKSAKIIDEFIKKKLKEHNLI
Sequences:
>Translated_227_residues MGLSFNGENMIIFGLFGKTGCGKTEILNELKKHHPVIDIEEIARTRGSILGDLYHLSMRSQEEFDYLINKEIEKAKKFGY AVVEYEGRKIGGEKKLKIPELLADIKNYTYKILIDCPYECQINRLVSIYKPKNEKEKEILINKFLILKESFKKPEMIEAV DNIIELIKQDKYYEAAKLIEEKLYREHYMRNVKKIKPDLIVYNEDVKKSAKIIDEFIKKKLKEHNLI >Mature_226_residues GLSFNGENMIIFGLFGKTGCGKTEILNELKKHHPVIDIEEIARTRGSILGDLYHLSMRSQEEFDYLINKEIEKAKKFGYA VVEYEGRKIGGEKKLKIPELLADIKNYTYKILIDCPYECQINRLVSIYKPKNEKEKEILINKFLILKESFKKPEMIEAVD NIIELIKQDKYYEAAKLIEEKLYREHYMRNVKKIKPDLIVYNEDVKKSAKIIDEFIKKKLKEHNLI
Specific function: Unknown
COG id: COG2603
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y053_METJA (Q60360)
Other databases:
- EMBL: L77117 - PIR: E64306 - RefSeq: NP_247017.1 - GeneID: 1450892 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0053 - NMPDR: fig|243232.1.peg.54 - TIGR: MJ0053 - HOGENOM: HBG541263 - OMA: CPYECQI - ProtClustDB: CLSK876049 - BioCyc: MJAN243232:MJ_0053-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26723; Mature: 26592
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSFNGENMIIFGLFGKTGCGKTEILNELKKHHPVIDIEEIARTRGSILGDLYHLSMRS CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC QEEFDYLINKEIEKAKKFGYAVVEYEGRKIGGEKKLKIPELLADIKNYTYKILIDCPYEC HHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCH QINRLVSIYKPKNEKEKEILINKFLILKESFKKPEMIEAVDNIIELIKQDKYYEAAKLIE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH EKLYREHYMRNVKKIKPDLIVYNEDVKKSAKIIDEFIKKKLKEHNLI HHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GLSFNGENMIIFGLFGKTGCGKTEILNELKKHHPVIDIEEIARTRGSILGDLYHLSMRS CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC QEEFDYLINKEIEKAKKFGYAVVEYEGRKIGGEKKLKIPELLADIKNYTYKILIDCPYEC HHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCH QINRLVSIYKPKNEKEKEILINKFLILKESFKKPEMIEAVDNIIELIKQDKYYEAAKLIE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH EKLYREHYMRNVKKIKPDLIVYNEDVKKSAKIIDEFIKKKLKEHNLI HHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087