Click here to switch to the map view.

The map label for this gene is 15668213

Identifier: 15668213

GI number: 15668213

Start: 42755

End: 45112

Strand: Direct

Name: 15668213

Synonym: MJ0043

Alternate gene names: NA

Gene position: 42755-45112 (Clockwise)

Preceding gene: 15668207

Following gene: 15668218

Centisome position: 2.57

GC content: 31.98

Gene sequence:

>2358_bases
ATGATAGCTAATGTTGATTTGCACATCCATTCAAGATTCTCTGGTGGAACATCAAAGGATATGAATGTAGAGAACATCCT
AAAATATGGAAAACTAAAGGGATTAAACATTATTGGAACTGGCGACTGCACACATCCAGATTATTTAGAAGAGATAAAGC
AATACAAAGATAGAGAGCTAATTTTAACTACTGAAATTGAAGATAAAAACAGAGTTCATCACCTTATCTTATTGCCTTCA
ATAAGCAAAGTAGAAGAGCTTAGAGAGATTTTAAAAAAATACTCTAAGGATATTGATAAAGAGGGAAGGCCAAGAGTATC
TATTGGTGGAGCTGAGCTTTTAGAGATTGTTAGAGACGTTGGTGGCTTAATAGGTCCTGCTCATTGCGTTCCTCCAGATA
CACTGCTGATATTAGAAAATGGCTTTAAAAGAATAGTCGATATAAAAGTAGGAGATAAGGTATTAACTCATGAAAATAGG
TTTAAAAAAGTTGAAAAAGTTTATAAAAGAAGATATATTGGAGACATAATAAAGATTAAAGTTAGATACTTCCCAGAGGA
GATAATATTAACTCCTGAACATCCGGTTTATGCAATTAAAACAGAAAAGAGATGTGACGGCTCTCATGGAATTTGTAAAT
TCAACTGCTTAACTCAATATACAAATCCTTCATGTAAAAAGAGGTATAGAAAATATAAGAGAGAATGGATTATAGCTAAG
GATTTAAAAGTGGGCGATGTGATTGTCTATCCAATACCGAATAGAGTGAGAGACATTAAATATCTGTCATTAGATAAGTA
TCTTAGCAATATTAAAAGAGAGTTCTGTAGAAGTAGAATCCCAGAAAAAATTGAAGTTTCTGAAGAGTTTTGTAGATTAG
TTGGATATTTCTTATCTGAAGGTTATTGCTTTAGAGATGGGATAGGATTTGCATTAGGAGAAAATGAGAAAAAAATCATT
GATGATATAGAATATTTGATGAAGAAAATATTCAACTTAAAACCGAAAATAAGAGATGATGGAAGAAGTGAAGGAATAGA
ATTAAAATATTACTCAAGAGTTTTAAGAGATTTCTTTGGAGACATGTTTTATTGTGGAGACGAAAAAAGAGCTTGGAATA
AAGCTTTACCTAATGAGTTTTTATATCTTCCTAAGAATAAACAACTTCAAATATTTATTGGATGGTGGAGAGGAGATAAA
GGTGTAACAACTTCAGAGATTTTAATGAATCAGTTAAGATTGATTTCTTTAAGATTAGGTTTTATAATAACATTTAGCAA
ACATGTTCCAAAAAATCCAAAAATTGGAGATAGAGAAGTTATTAAATACCATGCAAGATGGCAGGGGAGAGTATCAATAT
TGGATGAAAAAATTGTAGATGAGTTAAAAAACGAAGATATTAAGCTTCCAAAAAAAGATGTTAGATATGGATGGATTAAA
GGAAATTACCTATATGCTCCAATTATAAGAATAGGGAGGGAGTATTATGATGGATTTGTATATAACTTGGAGGTTGAAGA
TGATTCAAGCTATGTAACTGTTTCAGGAACTTTACATAACTGCTTTACTCCATGGACATCCCTCTATAAATCTTTTGATT
CAATATATGACTGCTATAACAAAAAACCTGACTTTGTAGAGCTTGGTTTGTCAGCAGATACTGATATGGCAGACATGATT
CCTGAGCTAAGAGATTTGCCATTTTTATCAAATTCAGATGCCCATTCATATCATCCTCATAGATTGGGAAGAGAATTTAA
TCAAATAGAGGTTGATTATATTGGCGGAATTGAAGATAACTTTGAACAAATAAAAAAGGCAATAAAACATAATAAAATTA
TAGCTAACTATGGATTAGACCCAAAATTGGGGAAGTATCATTTAACTGCTTGCTCTAAATGCCACACAAGGTTTAAGTTA
GAAGATGCTAAGAAATATAATTGGAAATGCCCAAAGTGTGGAGGAAGTATAAAGAAAGGAGTTTTAAGTAGAGTTGAAGA
GCTGAGTGATGGAAAGATAGAGCATCCAAAATTTAGACCTCCCTATTATAAGCTAATTCCATTGGCTGAGATGATTAGCC
TAACTATTGGTAAAGGGATATTTACAAAGGCTGTTCAAAGCTTATGGGAGGAGTTTATTAAAAAGTATGGAAATGAGATT
GAGGTTTTGATAAATGCTGATATTGATGAGCTTTCAAAAATACATCCAAAAGTAGCAGAGACAATTAATCTATTTAGGAA
GGGAAAAATATACATCTATCCTGGTGGTGGAGGAGAATATGGAAAAATATCCTTTAAACCTCAAAAAGTAGAGTGGTATA
GGGAGGAGGTAACATTAGATAGATGGTTAAAGCAATAA

Upstream 100 bases:

>100_bases
ATAATAATTTGTATATTTAAATAAATATACATTACTCTAAAAAACAAGTTTTAAAAGTAAGGAAAATTAAGCATTAAAAA
TTAACCATAATGGTGATACA

Downstream 100 bases:

>100_bases
AAACTTATTCTGAAAAATCAATTTCTGTTCCTTCAACCTCCCCCAATAAAGCTTTGTATATATTATTAGCTTTATTTCCA
TTAAATACAAAACCTCTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 785; Mature: 785

Protein sequence:

>785_residues
MIANVDLHIHSRFSGGTSKDMNVENILKYGKLKGLNIIGTGDCTHPDYLEEIKQYKDRELILTTEIEDKNRVHHLILLPS
ISKVEELREILKKYSKDIDKEGRPRVSIGGAELLEIVRDVGGLIGPAHCVPPDTLLILENGFKRIVDIKVGDKVLTHENR
FKKVEKVYKRRYIGDIIKIKVRYFPEEIILTPEHPVYAIKTEKRCDGSHGICKFNCLTQYTNPSCKKRYRKYKREWIIAK
DLKVGDVIVYPIPNRVRDIKYLSLDKYLSNIKREFCRSRIPEKIEVSEEFCRLVGYFLSEGYCFRDGIGFALGENEKKII
DDIEYLMKKIFNLKPKIRDDGRSEGIELKYYSRVLRDFFGDMFYCGDEKRAWNKALPNEFLYLPKNKQLQIFIGWWRGDK
GVTTSEILMNQLRLISLRLGFIITFSKHVPKNPKIGDREVIKYHARWQGRVSILDEKIVDELKNEDIKLPKKDVRYGWIK
GNYLYAPIIRIGREYYDGFVYNLEVEDDSSYVTVSGTLHNCFTPWTSLYKSFDSIYDCYNKKPDFVELGLSADTDMADMI
PELRDLPFLSNSDAHSYHPHRLGREFNQIEVDYIGGIEDNFEQIKKAIKHNKIIANYGLDPKLGKYHLTACSKCHTRFKL
EDAKKYNWKCPKCGGSIKKGVLSRVEELSDGKIEHPKFRPPYYKLIPLAEMISLTIGKGIFTKAVQSLWEEFIKKYGNEI
EVLINADIDELSKIHPKVAETINLFRKGKIYIYPGGGGEYGKISFKPQKVEWYREEVTLDRWLKQ

Sequences:

>Translated_785_residues
MIANVDLHIHSRFSGGTSKDMNVENILKYGKLKGLNIIGTGDCTHPDYLEEIKQYKDRELILTTEIEDKNRVHHLILLPS
ISKVEELREILKKYSKDIDKEGRPRVSIGGAELLEIVRDVGGLIGPAHCVPPDTLLILENGFKRIVDIKVGDKVLTHENR
FKKVEKVYKRRYIGDIIKIKVRYFPEEIILTPEHPVYAIKTEKRCDGSHGICKFNCLTQYTNPSCKKRYRKYKREWIIAK
DLKVGDVIVYPIPNRVRDIKYLSLDKYLSNIKREFCRSRIPEKIEVSEEFCRLVGYFLSEGYCFRDGIGFALGENEKKII
DDIEYLMKKIFNLKPKIRDDGRSEGIELKYYSRVLRDFFGDMFYCGDEKRAWNKALPNEFLYLPKNKQLQIFIGWWRGDK
GVTTSEILMNQLRLISLRLGFIITFSKHVPKNPKIGDREVIKYHARWQGRVSILDEKIVDELKNEDIKLPKKDVRYGWIK
GNYLYAPIIRIGREYYDGFVYNLEVEDDSSYVTVSGTLHNCFTPWTSLYKSFDSIYDCYNKKPDFVELGLSADTDMADMI
PELRDLPFLSNSDAHSYHPHRLGREFNQIEVDYIGGIEDNFEQIKKAIKHNKIIANYGLDPKLGKYHLTACSKCHTRFKL
EDAKKYNWKCPKCGGSIKKGVLSRVEELSDGKIEHPKFRPPYYKLIPLAEMISLTIGKGIFTKAVQSLWEEFIKKYGNEI
EVLINADIDELSKIHPKVAETINLFRKGKIYIYPGGGGEYGKISFKPQKVEWYREEVTLDRWLKQ
>Mature_785_residues
MIANVDLHIHSRFSGGTSKDMNVENILKYGKLKGLNIIGTGDCTHPDYLEEIKQYKDRELILTTEIEDKNRVHHLILLPS
ISKVEELREILKKYSKDIDKEGRPRVSIGGAELLEIVRDVGGLIGPAHCVPPDTLLILENGFKRIVDIKVGDKVLTHENR
FKKVEKVYKRRYIGDIIKIKVRYFPEEIILTPEHPVYAIKTEKRCDGSHGICKFNCLTQYTNPSCKKRYRKYKREWIIAK
DLKVGDVIVYPIPNRVRDIKYLSLDKYLSNIKREFCRSRIPEKIEVSEEFCRLVGYFLSEGYCFRDGIGFALGENEKKII
DDIEYLMKKIFNLKPKIRDDGRSEGIELKYYSRVLRDFFGDMFYCGDEKRAWNKALPNEFLYLPKNKQLQIFIGWWRGDK
GVTTSEILMNQLRLISLRLGFIITFSKHVPKNPKIGDREVIKYHARWQGRVSILDEKIVDELKNEDIKLPKKDVRYGWIK
GNYLYAPIIRIGREYYDGFVYNLEVEDDSSYVTVSGTLHNCFTPWTSLYKSFDSIYDCYNKKPDFVELGLSADTDMADMI
PELRDLPFLSNSDAHSYHPHRLGREFNQIEVDYIGGIEDNFEQIKKAIKHNKIIANYGLDPKLGKYHLTACSKCHTRFKL
EDAKKYNWKCPKCGGSIKKGVLSRVEELSDGKIEHPKFRPPYYKLIPLAEMISLTIGKGIFTKAVQSLWEEFIKKYGNEI
EVLINADIDELSKIHPKVAETINLFRKGKIYIYPGGGGEYGKISFKPQKVEWYREEVTLDRWLKQ

Specific function: Unknown

COG id: COG1372

COG function: function code L; Intein/homing endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DOD-type homing endonuclease domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y043_METJA (Q60348)

Other databases:

- EMBL:   L77117
- PIR:   C64305
- RefSeq:   NP_247006.1
- ProteinModelPortal:   Q60348
- GeneID:   1450881
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0043
- NMPDR:   fig|243232.1.peg.43
- TIGR:   MJ0043
- OMA:   THENRFK
- ProtClustDB:   CLSK2517540
- BioCyc:   MJAN243232:MJ_0043-MONOMER
- InterPro:   IPR005287
- InterPro:   IPR003586
- InterPro:   IPR003587
- InterPro:   IPR006142
- InterPro:   IPR004042
- InterPro:   IPR006141
- InterPro:   IPR003141
- InterPro:   IPR016195
- PRINTS:   PR00379
- SMART:   SM00305
- SMART:   SM00306
- SMART:   SM00481
- TIGRFAMs:   TIGR00375
- TIGRFAMs:   TIGR01443
- TIGRFAMs:   TIGR01445

Pfam domain/function: SSF89550 PHP-like

EC number: NA

Molecular weight: Translated: 91460; Mature: 91460

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS50818 INTEIN_C_TER; PS50819 INTEIN_ENDONUCLEASE; PS50817 INTEIN_N_TER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIANVDLHIHSRFSGGTSKDMNVENILKYGKLKGLNIIGTGDCTHPDYLEEIKQYKDREL
CEEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCEE
ILTTEIEDKNRVHHLILLPSISKVEELREILKKYSKDIDKEGRPRVSIGGAELLEIVRDV
EEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHH
GGLIGPAHCVPPDTLLILENGFKRIVDIKVGDKVLTHENRFKKVEKVYKRRYIGDIIKIK
HHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCHHHCCHHHHHHHHHHHHHHHCCEEEEE
VRYFPEEIILTPEHPVYAIKTEKRCDGSHGICKFNCLTQYTNPSCKKRYRKYKREWIIAK
EEECCCEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHEEEEE
DLKVGDVIVYPIPNRVRDIKYLSLDKYLSNIKREFCRSRIPEKIEVSEEFCRLVGYFLSE
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
GYCFRDGIGFALGENEKKIIDDIEYLMKKIFNLKPKIRDDGRSEGIELKYYSRVLRDFFG
CEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHC
DMFYCGDEKRAWNKALPNEFLYLPKNKQLQIFIGWWRGDKGVTTSEILMNQLRLISLRLG
CEEEECCCHHHHHHCCCCCEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC
FIITFSKHVPKNPKIGDREVIKYHARWQGRVSILDEKIVDELKNEDIKLPKKDVRYGWIK
EEEEECCCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEE
GNYLYAPIIRIGREYYDGFVYNLEVEDDSSYVTVSGTLHNCFTPWTSLYKSFDSIYDCYN
CCEEEHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHC
KKPDFVELGLSADTDMADMIPELRDLPFLSNSDAHSYHPHRLGREFNQIEVDYIGGIEDN
CCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCHH
FEQIKKAIKHNKIIANYGLDPKLGKYHLTACSKCHTRFKLEDAKKYNWKCPKCGGSIKKG
HHHHHHHHHHCCEEEECCCCCCCCCEEHHHHHHHHHCEEECCCCCCCCCCCCCCCHHHHH
VLSRVEELSDGKIEHPKFRPPYYKLIPLAEMISLTIGKGIFTKAVQSLWEEFIKKYGNEI
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEE
EVLINADIDELSKIHPKVAETINLFRKGKIYIYPGGGGEYGKISFKPQKVEWYREEVTLD
EEEEECCHHHHHHHCHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCHHHHHHHHHHHHH
RWLKQ
HHHCC
>Mature Secondary Structure
MIANVDLHIHSRFSGGTSKDMNVENILKYGKLKGLNIIGTGDCTHPDYLEEIKQYKDREL
CEEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCEE
ILTTEIEDKNRVHHLILLPSISKVEELREILKKYSKDIDKEGRPRVSIGGAELLEIVRDV
EEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHH
GGLIGPAHCVPPDTLLILENGFKRIVDIKVGDKVLTHENRFKKVEKVYKRRYIGDIIKIK
HHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCHHHCCHHHHHHHHHHHHHHHCCEEEEE
VRYFPEEIILTPEHPVYAIKTEKRCDGSHGICKFNCLTQYTNPSCKKRYRKYKREWIIAK
EEECCCEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHEEEEE
DLKVGDVIVYPIPNRVRDIKYLSLDKYLSNIKREFCRSRIPEKIEVSEEFCRLVGYFLSE
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
GYCFRDGIGFALGENEKKIIDDIEYLMKKIFNLKPKIRDDGRSEGIELKYYSRVLRDFFG
CEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHC
DMFYCGDEKRAWNKALPNEFLYLPKNKQLQIFIGWWRGDKGVTTSEILMNQLRLISLRLG
CEEEECCCHHHHHHCCCCCEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHC
FIITFSKHVPKNPKIGDREVIKYHARWQGRVSILDEKIVDELKNEDIKLPKKDVRYGWIK
EEEEECCCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEE
GNYLYAPIIRIGREYYDGFVYNLEVEDDSSYVTVSGTLHNCFTPWTSLYKSFDSIYDCYN
CCEEEHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHC
KKPDFVELGLSADTDMADMIPELRDLPFLSNSDAHSYHPHRLGREFNQIEVDYIGGIEDN
CCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCHH
FEQIKKAIKHNKIIANYGLDPKLGKYHLTACSKCHTRFKLEDAKKYNWKCPKCGGSIKKG
HHHHHHHHHHCCEEEECCCCCCCCCEEHHHHHHHHHCEEECCCCCCCCCCCCCCCHHHHH
VLSRVEELSDGKIEHPKFRPPYYKLIPLAEMISLTIGKGIFTKAVQSLWEEFIKKYGNEI
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEE
EVLINADIDELSKIHPKVAETINLFRKGKIYIYPGGGGEYGKISFKPQKVEWYREEVTLD
EEEEECCHHHHHHHCHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCHHHHHHHHHHHHH
RWLKQ
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087