Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668218

Identifier: 15668218

GI number: 15668218

Start: 48846

End: 49163

Strand: Direct

Name: 15668218

Synonym: MJ0047.1

Alternate gene names: NA

Gene position: 48846-49163 (Clockwise)

Preceding gene: 15668213

Following gene: 15668222

Centisome position: 2.93

GC content: 33.65

Gene sequence:

>318_bases
TTGAAATATAATACTCATCCGTTTCCATCCTCTATCCATTCTCTAAGAGGTCTGATTTTAATCTTCAGTAAATACTGTTT
TAATGCCTTCAATCTTATCTATTTCCATCCTCCAAGAGGTCTGATTTTAACAATTATTTGGGAAAAGGGAAAAGTATCAA
TAACAGATAAATTTCCATTCCGAAACGGTCTGATTTTAACTAACGCCAAAAACCTCCATTACCCCCAGCATAACAACTGG
ATTTCCATTCCGAAACGGTCTGATTTTAACAGGGCAATCATTCACAACATAATATACTTCATCACTCTTAATATTTAA

Upstream 100 bases:

>100_bases
TTGATAAAGATAAAAACAAAATAACAATAAGCTGATTTTAATTAAAACAGAATCCCATTCCGAAACGGTCTGATTTTAAT
TATCTTATAAATTAAAAGCA

Downstream 100 bases:

>100_bases
GCTTTTCTATACCATATTTTTCTAAGGGTAAATAACCATCTTACAATATAAACCTTTTAGTATTTAAAATTTTATCTCTT
TACTAAAACTAAGCATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKYNTHPFPSSIHSLRGLILIFSKYCFNAFNLIYFHPPRGLILTIIWEKGKVSITDKFPFRNGLILTNAKNLHYPQHNNW
ISIPKRSDFNRAIIHNIIYFITLNI

Sequences:

>Translated_105_residues
MKYNTHPFPSSIHSLRGLILIFSKYCFNAFNLIYFHPPRGLILTIIWEKGKVSITDKFPFRNGLILTNAKNLHYPQHNNW
ISIPKRSDFNRAIIHNIIYFITLNI
>Mature_105_residues
MKYNTHPFPSSIHSLRGLILIFSKYCFNAFNLIYFHPPRGLILTIIWEKGKVSITDKFPFRNGLILTNAKNLHYPQHNNW
ISIPKRSDFNRAIIHNIIYFITLNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y04A_METJA (P81302)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_247011.1
- GeneID:   1450886
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0047.1
- NMPDR:   fig|243232.1.peg.48
- TIGR:   MJ0047.1
- BioCyc:   MJAN243232:MJ_0047.1-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12400; Mature: 12400

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNTHPFPSSIHSLRGLILIFSKYCFNAFNLIYFHPPRGLILTIIWEKGKVSITDKFPF
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEECCCEEEEEECCCC
RNGLILTNAKNLHYPQHNNWISIPKRSDFNRAIIHNIIYFITLNI
CCCEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHEEEEEEEECC
>Mature Secondary Structure
MKYNTHPFPSSIHSLRGLILIFSKYCFNAFNLIYFHPPRGLILTIIWEKGKVSITDKFPF
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEECCCEEEEEECCCC
RNGLILTNAKNLHYPQHNNWISIPKRSDFNRAIIHNIIYFITLNI
CCCEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087