| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668192
Identifier: 15668192
GI number: 15668192
Start: 22762
End: 23889
Strand: Direct
Name: 15668192
Synonym: MJ0021
Alternate gene names: NA
Gene position: 22762-23889 (Clockwise)
Preceding gene: 15668189
Following gene: 15668193
Centisome position: 1.37
GC content: 31.03
Gene sequence:
>1128_bases ATGAATGTTGAAGAGATTGAAAAATATTTGGAAGAAAATTTTGATAAATTGCCAGAGGGATGTAAGCAGTGTGTTAAAGG GGGAAAATTAGTTTTATTCATCACAGGAATTTGTAATAACAACTGCTACTACTGTCCTTTATCTGAAAAGAGAAAGAATA AAGATGTAATATATGCCAATGAGAGGTTAATAACTACCGTTGAAGAGGCTATAGAAGAGGCAAAGCTCTGCAGTAGTAAG GGAGTAGGAATAACAGGAGGTAATCCTTTATTAAAAATAAATAGAACTGTAAAATTCTTAAAAGCACTAAAAAAAGAGTT TGATGAATTTCATGCTCATCTATATACAACTCCGGAAACAGTAAATGAAGAGAACTTAAAACTTCTAAAAGAGGCAGATT TAGATGAGATAAGGCTACATCCAACAAAAATATTCAATGAAGGATATGATGAAGAATATATAAAGTTTTTATGTAATAAA TTGAACTTATGCAACAAATACATTGAAGATGTTGGGGTTGAAATTCCAGCAATCCCAAATATGGAAAATGAAATTTTAAA GTTAGCTGAGGCAATTGATGGAATAGCCAAATTTATGAATATCAATGAGCTTGAGTTTTCTGAGGAAAATTATCATGAAT TAGAGAAGAGAGGTTTTATGCCAAAGGATGATGTAAGTAATGCAATTGCTGGCAGTGAAGAAACAGCTTTAAAAGTTATA AAAGAATTTAAAGGTGATTTATTCATTAACTACTGCCCATCAGTTTTAAAAGATGCCATACAGATGAGAAATAGATTAAT AAATAGAGCTAAGAATGTAGCTAAGCCTTATGAGGTTATAACTGAAGATGGCTTACTATTGAGAGGCATTATGATTTTTG ACAATGAGGATGATTTAAAGGAAATGGCTGAGATTTTGGAAGAGAATGAGATAGAGTTTGAAATTATTGATAAAAATATA TGCTTAAATCCATTTATATTAGAGGATATTATTGAAGAGATGAAAAGGCAGAGGTTTCCTATAACATTCTCAGCTTATAT CTCAGAACTCTACCCTACAGCTGATGCTTTAGAAGTAGAGAGAATCCCATTAATAACTAAAAAACTAAAGTTTAGGAGAA GAAGATAG
Upstream 100 bases:
>100_bases TTTAACAGGTTGAATGCAATTTAAATATATTAAGGAACTTTGAAGCTTTTGGCTTCATCTATCCAATAATAAATTACTAT TCAATATTTACGGTGAAAAC
Downstream 100 bases:
>100_bases TTTTTTGCAAAAGTTATTAAAATTACTAAGGTTATTTGAACGCCAAAGGCGTTCATTTCTTCATTAATACTCAAAATGTT TTGCAAAAAACTATAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MNVEEIEKYLEENFDKLPEGCKQCVKGGKLVLFITGICNNNCYYCPLSEKRKNKDVIYANERLITTVEEAIEEAKLCSSK GVGITGGNPLLKINRTVKFLKALKKEFDEFHAHLYTTPETVNEENLKLLKEADLDEIRLHPTKIFNEGYDEEYIKFLCNK LNLCNKYIEDVGVEIPAIPNMENEILKLAEAIDGIAKFMNINELEFSEENYHELEKRGFMPKDDVSNAIAGSEETALKVI KEFKGDLFINYCPSVLKDAIQMRNRLINRAKNVAKPYEVITEDGLLLRGIMIFDNEDDLKEMAEILEENEIEFEIIDKNI CLNPFILEDIIEEMKRQRFPITFSAYISELYPTADALEVERIPLITKKLKFRRRR
Sequences:
>Translated_375_residues MNVEEIEKYLEENFDKLPEGCKQCVKGGKLVLFITGICNNNCYYCPLSEKRKNKDVIYANERLITTVEEAIEEAKLCSSK GVGITGGNPLLKINRTVKFLKALKKEFDEFHAHLYTTPETVNEENLKLLKEADLDEIRLHPTKIFNEGYDEEYIKFLCNK LNLCNKYIEDVGVEIPAIPNMENEILKLAEAIDGIAKFMNINELEFSEENYHELEKRGFMPKDDVSNAIAGSEETALKVI KEFKGDLFINYCPSVLKDAIQMRNRLINRAKNVAKPYEVITEDGLLLRGIMIFDNEDDLKEMAEILEENEIEFEIIDKNI CLNPFILEDIIEEMKRQRFPITFSAYISELYPTADALEVERIPLITKKLKFRRRR >Mature_375_residues MNVEEIEKYLEENFDKLPEGCKQCVKGGKLVLFITGICNNNCYYCPLSEKRKNKDVIYANERLITTVEEAIEEAKLCSSK GVGITGGNPLLKINRTVKFLKALKKEFDEFHAHLYTTPETVNEENLKLLKEADLDEIRLHPTKIFNEGYDEEYIKFLCNK LNLCNKYIEDVGVEIPAIPNMENEILKLAEAIDGIAKFMNINELEFSEENYHELEKRGFMPKDDVSNAIAGSEETALKVI KEFKGDLFINYCPSVLKDAIQMRNRLINRAKNVAKPYEVITEDGLLLRGIMIFDNEDDLKEMAEILEENEIEFEIIDKNI CLNPFILEDIIEEMKRQRFPITFSAYISELYPTADALEVERIPLITKKLKFRRRR
Specific function: Unknown
COG id: COG2108
COG function: function code R; Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the organic radical-activating enzymes family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y021_METJA (Q60332)
Other databases:
- EMBL: L77117 - PIR: E64302 - RefSeq: NP_246984.1 - ProteinModelPortal: Q60332 - SMR: Q60332 - GeneID: 1450859 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0021 - NMPDR: fig|243232.1.peg.21 - TIGR: MJ0021 - HOGENOM: HBG645904 - OMA: DCFYCPL - ProtClustDB: CLSK2749829 - BioCyc: MJAN243232:MJ_0021-MONOMER - InterPro: IPR013785 - InterPro: IPR006638 - InterPro: IPR001989 - InterPro: IPR007197 - Gene3D: G3DSA:3.20.20.70 - SMART: SM00729
Pfam domain/function: PF04055 Radical_SAM
EC number: NA
Molecular weight: Translated: 43447; Mature: 43447
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS01087 RADICAL_ACTIVATING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVEEIEKYLEENFDKLPEGCKQCVKGGKLVLFITGICNNNCYYCPLSEKRKNKDVIYAN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEECCCCCCCCCCCEEEEC ERLITTVEEAIEEAKLCSSKGVGITGGNPLLKINRTVKFLKALKKEFDEFHAHLYTTPET CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEECCCCC VNEENLKLLKEADLDEIRLHPTKIFNEGYDEEYIKFLCNKLNLCNKYIEDVGVEIPAIPN CCHHHHHHHHHCCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC MENEILKLAEAIDGIAKFMNINELEFSEENYHELEKRGFMPKDDVSNAIAGSEETALKVI CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH KEFKGDLFINYCPSVLKDAIQMRNRLINRAKNVAKPYEVITEDGLLLRGIMIFDNEDDLK HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEECCCHHHH EMAEILEENEIEFEIIDKNICLNPFILEDIIEEMKRQRFPITFSAYISELYPTADALEVE HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHH RIPLITKKLKFRRRR HHHHHHHHHHHHCCC >Mature Secondary Structure MNVEEIEKYLEENFDKLPEGCKQCVKGGKLVLFITGICNNNCYYCPLSEKRKNKDVIYAN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEECCCCCCCCCCCEEEEC ERLITTVEEAIEEAKLCSSKGVGITGGNPLLKINRTVKFLKALKKEFDEFHAHLYTTPET CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEECCCCC VNEENLKLLKEADLDEIRLHPTKIFNEGYDEEYIKFLCNKLNLCNKYIEDVGVEIPAIPN CCHHHHHHHHHCCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC MENEILKLAEAIDGIAKFMNINELEFSEENYHELEKRGFMPKDDVSNAIAGSEETALKVI CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH KEFKGDLFINYCPSVLKDAIQMRNRLINRAKNVAKPYEVITEDGLLLRGIMIFDNEDDLK HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEECCCHHHH EMAEILEENEIEFEIIDKNICLNPFILEDIIEEMKRQRFPITFSAYISELYPTADALEVE HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHH RIPLITKKLKFRRRR HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087