| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668189
Identifier: 15668189
GI number: 15668189
Start: 17658
End: 19232
Strand: Direct
Name: 15668189
Synonym: MJ0018
Alternate gene names: NA
Gene position: 17658-19232 (Clockwise)
Preceding gene: 15668188
Following gene: 15668192
Centisome position: 1.06
GC content: 28.19
Gene sequence:
>1575_bases ATGATTTTCAAAAAAAGAAAAGGGCAACTCACATTAGAATTCATTTTATTAATTTTAGGTATGACAGTTGTTGGAATTGT TATTACTATGGGATTAGTAGAAAAAAGTCCAATATTTATTGGAGATAAACCATTAGAAGTTAAAAAAGAAACTATGGGAT TGTTCATAAATGAATCGAAATTTAATTTAACAGTTGAAAATACTACAATATCAAATTTAGGTAATAATAATACAGAATCG AACAACTCAAATAATGAAACTGGTGGAGGGTATCTTTATATAAGAGTTTCAGGAAGTTCAAAAGGTCTAATAACGAAAGA TTTAATAGTATCTGGAGATGCTAAAGATGTTTCTGGAGACATTTCTAAAACTATAAATAGTAAATGTGTTGAAGAAAATG CTATTGGAGAAGTTTATGGAGATATATATTTAGAAGGTAGTGCTAATTACAAATTAGGTAATTTATTATGTATAAATAAA TTCCAGACATATTTAACTGGTAGCGGAAGCTTAAAAGTATATGTTCCGTATATACAGGAATTCATAATAAGGGACAAAAA TAGCGGAGAATCTCAAATTGGAGGAAGTGTTTCACTTACTGTGGGTAATACAAATATTAATAGATTTTATGTTGAAAAGA TAACTGGAGGAGCTAAAGTAAAATTTAAGGACTTTGCTATAAATACATTTGAAACTAATAGTGGTAACTTTGGAGGAGGG GCAGAGACAGTATTTGAAAATGGACGAATATCTACAATGAAATTAGGGGATATTGTAAGTGGAGGAAATGTAAAGTTTAA AAACGTAAATATTGGAAATATGATAATAAACAATATGATAGGAAGCCCAACATTTGAGCTTTCAAATTCAACAATAAACA ATATGAAAATAAATAAATTAATTGGCAGCCCAAAAATATTAGTAGAGGATAGTTCAATTATAAATTCCTTAGAAACAGAC CAATTAGGTGGAAGTGACATTGAAGTTAAAGATGGAAGTATAATAAAAGAAATTACAATACACGGTTCTACCGGAACAAA CGGGAAGATATTTGTTGGATATGGGGGCAAAGTTGAAAAGTTGTTTGTAGAAGGCAATATCAATTCAAGAATTGATCTTA AAGGATTTAGTGGGCTTATAGATGTTAGTATTGGAAATATTGCTGGCGGAGGAAAATTATATGTTGATAATGTAATTGGA AATTCAATATCAACAGGAATTATTGGGAACAATAAGGGATTAGAAATTGAAGATTCAAGTTTGTCAGTTGTGAATATTGA AGGTGTATCAAATTCTGGAAGTGCATTTATTAAAAATACCCTCATATATCAGTTAAAGATTAATTCATTACCTGATTGGG GTTCAGATATGACGCTTAATAAAGTTAATATAACAAAATTATCTATTAATGAAATTAGAAATGGAAAACTTACTATTAAA AATTCAGAAATTGGTGAGTTGCATATTACTAAAATTTCAGGAAAAGGAAAAATAATTGTAAAAAAGTCTTATGTAAATGG AAAATACTATAAGAAGTTAGTAATCAAAAAGAGTAATTATAAGAAATGGAGTTAA
Upstream 100 bases:
>100_bases ATAATATTTATCTAAATATTTATATATTATTTGGAAAGAAAAAAGCATATATAACTATTAACTTTTAAAATTTGATATAT GGGTAATTAGGTGGTGTATA
Downstream 100 bases:
>100_bases ATCTCCTTTAACTTTTTTCTCAATATATCATTAACTAACTTTCCATCCGCTTTTCCTCTTAGCTTTGCCATACATCTACC CATTAAAAATCCATAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MIFKKRKGQLTLEFILLILGMTVVGIVITMGLVEKSPIFIGDKPLEVKKETMGLFINESKFNLTVENTTISNLGNNNTES NNSNNETGGGYLYIRVSGSSKGLITKDLIVSGDAKDVSGDISKTINSKCVEENAIGEVYGDIYLEGSANYKLGNLLCINK FQTYLTGSGSLKVYVPYIQEFIIRDKNSGESQIGGSVSLTVGNTNINRFYVEKITGGAKVKFKDFAINTFETNSGNFGGG AETVFENGRISTMKLGDIVSGGNVKFKNVNIGNMIINNMIGSPTFELSNSTINNMKINKLIGSPKILVEDSSIINSLETD QLGGSDIEVKDGSIIKEITIHGSTGTNGKIFVGYGGKVEKLFVEGNINSRIDLKGFSGLIDVSIGNIAGGGKLYVDNVIG NSISTGIIGNNKGLEIEDSSLSVVNIEGVSNSGSAFIKNTLIYQLKINSLPDWGSDMTLNKVNITKLSINEIRNGKLTIK NSEIGELHITKISGKGKIIVKKSYVNGKYYKKLVIKKSNYKKWS
Sequences:
>Translated_524_residues MIFKKRKGQLTLEFILLILGMTVVGIVITMGLVEKSPIFIGDKPLEVKKETMGLFINESKFNLTVENTTISNLGNNNTES NNSNNETGGGYLYIRVSGSSKGLITKDLIVSGDAKDVSGDISKTINSKCVEENAIGEVYGDIYLEGSANYKLGNLLCINK FQTYLTGSGSLKVYVPYIQEFIIRDKNSGESQIGGSVSLTVGNTNINRFYVEKITGGAKVKFKDFAINTFETNSGNFGGG AETVFENGRISTMKLGDIVSGGNVKFKNVNIGNMIINNMIGSPTFELSNSTINNMKINKLIGSPKILVEDSSIINSLETD QLGGSDIEVKDGSIIKEITIHGSTGTNGKIFVGYGGKVEKLFVEGNINSRIDLKGFSGLIDVSIGNIAGGGKLYVDNVIG NSISTGIIGNNKGLEIEDSSLSVVNIEGVSNSGSAFIKNTLIYQLKINSLPDWGSDMTLNKVNITKLSINEIRNGKLTIK NSEIGELHITKISGKGKIIVKKSYVNGKYYKKLVIKKSNYKKWS >Mature_524_residues MIFKKRKGQLTLEFILLILGMTVVGIVITMGLVEKSPIFIGDKPLEVKKETMGLFINESKFNLTVENTTISNLGNNNTES NNSNNETGGGYLYIRVSGSSKGLITKDLIVSGDAKDVSGDISKTINSKCVEENAIGEVYGDIYLEGSANYKLGNLLCINK FQTYLTGSGSLKVYVPYIQEFIIRDKNSGESQIGGSVSLTVGNTNINRFYVEKITGGAKVKFKDFAINTFETNSGNFGGG AETVFENGRISTMKLGDIVSGGNVKFKNVNIGNMIINNMIGSPTFELSNSTINNMKINKLIGSPKILVEDSSIINSLETD QLGGSDIEVKDGSIIKEITIHGSTGTNGKIFVGYGGKVEKLFVEGNINSRIDLKGFSGLIDVSIGNIAGGGKLYVDNVIG NSISTGIIGNNKGLEIEDSSLSVVNIEGVSNSGSAFIKNTLIYQLKINSLPDWGSDMTLNKVNITKLSINEIRNGKLTIK NSEIGELHITKISGKGKIIVKKSYVNGKYYKKLVIKKSNYKKWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y018_METJA (Q60324)
Other databases:
- EMBL: L77117 - PIR: B64302 - RefSeq: NP_246981.1 - ProteinModelPortal: Q60324 - GeneID: 1450856 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0018 - NMPDR: fig|243232.1.peg.18 - TIGR: MJ0018 - BioCyc: MJAN243232:MJ_0018-MONOMER - InterPro: IPR007166
Pfam domain/function: PF04021 Class_IIIsignal
EC number: NA
Molecular weight: Translated: 56566; Mature: 56566
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xade3ad8)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFKKRKGQLTLEFILLILGMTVVGIVITMGLVEKSPIFIGDKPLEVKKETMGLFINESK CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCEEEEEEECCE FNLTVENTTISNLGNNNTESNNSNNETGGGYLYIRVSGSSKGLITKDLIVSGDAKDVSGD EEEEEECCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCH ISKTINSKCVEENAIGEVYGDIYLEGSANYKLGNLLCINKFQTYLTGSGSLKVYVPYIQE HHHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCEEEEECEEEEEECCCCEEEEHHHHHH FIIRDKNSGESQIGGSVSLTVGNTNINRFYVEKITGGAKVKFKDFAINTFETNSGNFGGG HHEECCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCEEEEEEEEEEEEEECCCCCCCCC AETVFENGRISTMKLGDIVSGGNVKFKNVNIGNMIINNMIGSPTFELSNSTINNMKINKL CHHEECCCCEEEEEECCEECCCCEEEEEEEHHHHHHHHHCCCCEEEECCCEECCEEEEEE IGSPKILVEDSSIINSLETDQLGGSDIEVKDGSIIKEITIHGSTGTNGKIFVGYGGKVEK CCCCEEEEECHHHHCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCEEEEEECCEEEE LFVEGNINSRIDLKGFSGLIDVSIGNIAGGGKLYVDNVIGNSISTGIIGNNKGLEIEDSS EEEECCCCCEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCCEEECCC LSVVNIEGVSNSGSAFIKNTLIYQLKINSLPDWGSDMTLNKVNITKLSINEIRNGKLTIK EEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEHHHCCCCEEEEE NSEIGELHITKISGKGKIIVKKSYVNGKYYKKLVIKKSNYKKWS CCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCH >Mature Secondary Structure MIFKKRKGQLTLEFILLILGMTVVGIVITMGLVEKSPIFIGDKPLEVKKETMGLFINESK CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCEEEEEEECCE FNLTVENTTISNLGNNNTESNNSNNETGGGYLYIRVSGSSKGLITKDLIVSGDAKDVSGD EEEEEECCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCH ISKTINSKCVEENAIGEVYGDIYLEGSANYKLGNLLCINKFQTYLTGSGSLKVYVPYIQE HHHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCEEEEECEEEEEECCCCEEEEHHHHHH FIIRDKNSGESQIGGSVSLTVGNTNINRFYVEKITGGAKVKFKDFAINTFETNSGNFGGG HHEECCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCEEEEEEEEEEEEEECCCCCCCCC AETVFENGRISTMKLGDIVSGGNVKFKNVNIGNMIINNMIGSPTFELSNSTINNMKINKL CHHEECCCCEEEEEECCEECCCCEEEEEEEHHHHHHHHHCCCCEEEECCCEECCEEEEEE IGSPKILVEDSSIINSLETDQLGGSDIEVKDGSIIKEITIHGSTGTNGKIFVGYGGKVEK CCCCEEEEECHHHHCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCEEEEEECCEEEE LFVEGNINSRIDLKGFSGLIDVSIGNIAGGGKLYVDNVIGNSISTGIIGNNKGLEIEDSS EEEECCCCCEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCCEEECCC LSVVNIEGVSNSGSAFIKNTLIYQLKINSLPDWGSDMTLNKVNITKLSINEIRNGKLTIK EEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEHHHCCCCEEEEE NSEIGELHITKISGKGKIIVKKSYVNGKYYKKLVIKKSNYKKWS CCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087