Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668189

Identifier: 15668189

GI number: 15668189

Start: 17658

End: 19232

Strand: Direct

Name: 15668189

Synonym: MJ0018

Alternate gene names: NA

Gene position: 17658-19232 (Clockwise)

Preceding gene: 15668188

Following gene: 15668192

Centisome position: 1.06

GC content: 28.19

Gene sequence:

>1575_bases
ATGATTTTCAAAAAAAGAAAAGGGCAACTCACATTAGAATTCATTTTATTAATTTTAGGTATGACAGTTGTTGGAATTGT
TATTACTATGGGATTAGTAGAAAAAAGTCCAATATTTATTGGAGATAAACCATTAGAAGTTAAAAAAGAAACTATGGGAT
TGTTCATAAATGAATCGAAATTTAATTTAACAGTTGAAAATACTACAATATCAAATTTAGGTAATAATAATACAGAATCG
AACAACTCAAATAATGAAACTGGTGGAGGGTATCTTTATATAAGAGTTTCAGGAAGTTCAAAAGGTCTAATAACGAAAGA
TTTAATAGTATCTGGAGATGCTAAAGATGTTTCTGGAGACATTTCTAAAACTATAAATAGTAAATGTGTTGAAGAAAATG
CTATTGGAGAAGTTTATGGAGATATATATTTAGAAGGTAGTGCTAATTACAAATTAGGTAATTTATTATGTATAAATAAA
TTCCAGACATATTTAACTGGTAGCGGAAGCTTAAAAGTATATGTTCCGTATATACAGGAATTCATAATAAGGGACAAAAA
TAGCGGAGAATCTCAAATTGGAGGAAGTGTTTCACTTACTGTGGGTAATACAAATATTAATAGATTTTATGTTGAAAAGA
TAACTGGAGGAGCTAAAGTAAAATTTAAGGACTTTGCTATAAATACATTTGAAACTAATAGTGGTAACTTTGGAGGAGGG
GCAGAGACAGTATTTGAAAATGGACGAATATCTACAATGAAATTAGGGGATATTGTAAGTGGAGGAAATGTAAAGTTTAA
AAACGTAAATATTGGAAATATGATAATAAACAATATGATAGGAAGCCCAACATTTGAGCTTTCAAATTCAACAATAAACA
ATATGAAAATAAATAAATTAATTGGCAGCCCAAAAATATTAGTAGAGGATAGTTCAATTATAAATTCCTTAGAAACAGAC
CAATTAGGTGGAAGTGACATTGAAGTTAAAGATGGAAGTATAATAAAAGAAATTACAATACACGGTTCTACCGGAACAAA
CGGGAAGATATTTGTTGGATATGGGGGCAAAGTTGAAAAGTTGTTTGTAGAAGGCAATATCAATTCAAGAATTGATCTTA
AAGGATTTAGTGGGCTTATAGATGTTAGTATTGGAAATATTGCTGGCGGAGGAAAATTATATGTTGATAATGTAATTGGA
AATTCAATATCAACAGGAATTATTGGGAACAATAAGGGATTAGAAATTGAAGATTCAAGTTTGTCAGTTGTGAATATTGA
AGGTGTATCAAATTCTGGAAGTGCATTTATTAAAAATACCCTCATATATCAGTTAAAGATTAATTCATTACCTGATTGGG
GTTCAGATATGACGCTTAATAAAGTTAATATAACAAAATTATCTATTAATGAAATTAGAAATGGAAAACTTACTATTAAA
AATTCAGAAATTGGTGAGTTGCATATTACTAAAATTTCAGGAAAAGGAAAAATAATTGTAAAAAAGTCTTATGTAAATGG
AAAATACTATAAGAAGTTAGTAATCAAAAAGAGTAATTATAAGAAATGGAGTTAA

Upstream 100 bases:

>100_bases
ATAATATTTATCTAAATATTTATATATTATTTGGAAAGAAAAAAGCATATATAACTATTAACTTTTAAAATTTGATATAT
GGGTAATTAGGTGGTGTATA

Downstream 100 bases:

>100_bases
ATCTCCTTTAACTTTTTTCTCAATATATCATTAACTAACTTTCCATCCGCTTTTCCTCTTAGCTTTGCCATACATCTACC
CATTAAAAATCCATAGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MIFKKRKGQLTLEFILLILGMTVVGIVITMGLVEKSPIFIGDKPLEVKKETMGLFINESKFNLTVENTTISNLGNNNTES
NNSNNETGGGYLYIRVSGSSKGLITKDLIVSGDAKDVSGDISKTINSKCVEENAIGEVYGDIYLEGSANYKLGNLLCINK
FQTYLTGSGSLKVYVPYIQEFIIRDKNSGESQIGGSVSLTVGNTNINRFYVEKITGGAKVKFKDFAINTFETNSGNFGGG
AETVFENGRISTMKLGDIVSGGNVKFKNVNIGNMIINNMIGSPTFELSNSTINNMKINKLIGSPKILVEDSSIINSLETD
QLGGSDIEVKDGSIIKEITIHGSTGTNGKIFVGYGGKVEKLFVEGNINSRIDLKGFSGLIDVSIGNIAGGGKLYVDNVIG
NSISTGIIGNNKGLEIEDSSLSVVNIEGVSNSGSAFIKNTLIYQLKINSLPDWGSDMTLNKVNITKLSINEIRNGKLTIK
NSEIGELHITKISGKGKIIVKKSYVNGKYYKKLVIKKSNYKKWS

Sequences:

>Translated_524_residues
MIFKKRKGQLTLEFILLILGMTVVGIVITMGLVEKSPIFIGDKPLEVKKETMGLFINESKFNLTVENTTISNLGNNNTES
NNSNNETGGGYLYIRVSGSSKGLITKDLIVSGDAKDVSGDISKTINSKCVEENAIGEVYGDIYLEGSANYKLGNLLCINK
FQTYLTGSGSLKVYVPYIQEFIIRDKNSGESQIGGSVSLTVGNTNINRFYVEKITGGAKVKFKDFAINTFETNSGNFGGG
AETVFENGRISTMKLGDIVSGGNVKFKNVNIGNMIINNMIGSPTFELSNSTINNMKINKLIGSPKILVEDSSIINSLETD
QLGGSDIEVKDGSIIKEITIHGSTGTNGKIFVGYGGKVEKLFVEGNINSRIDLKGFSGLIDVSIGNIAGGGKLYVDNVIG
NSISTGIIGNNKGLEIEDSSLSVVNIEGVSNSGSAFIKNTLIYQLKINSLPDWGSDMTLNKVNITKLSINEIRNGKLTIK
NSEIGELHITKISGKGKIIVKKSYVNGKYYKKLVIKKSNYKKWS
>Mature_524_residues
MIFKKRKGQLTLEFILLILGMTVVGIVITMGLVEKSPIFIGDKPLEVKKETMGLFINESKFNLTVENTTISNLGNNNTES
NNSNNETGGGYLYIRVSGSSKGLITKDLIVSGDAKDVSGDISKTINSKCVEENAIGEVYGDIYLEGSANYKLGNLLCINK
FQTYLTGSGSLKVYVPYIQEFIIRDKNSGESQIGGSVSLTVGNTNINRFYVEKITGGAKVKFKDFAINTFETNSGNFGGG
AETVFENGRISTMKLGDIVSGGNVKFKNVNIGNMIINNMIGSPTFELSNSTINNMKINKLIGSPKILVEDSSIINSLETD
QLGGSDIEVKDGSIIKEITIHGSTGTNGKIFVGYGGKVEKLFVEGNINSRIDLKGFSGLIDVSIGNIAGGGKLYVDNVIG
NSISTGIIGNNKGLEIEDSSLSVVNIEGVSNSGSAFIKNTLIYQLKINSLPDWGSDMTLNKVNITKLSINEIRNGKLTIK
NSEIGELHITKISGKGKIIVKKSYVNGKYYKKLVIKKSNYKKWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y018_METJA (Q60324)

Other databases:

- EMBL:   L77117
- PIR:   B64302
- RefSeq:   NP_246981.1
- ProteinModelPortal:   Q60324
- GeneID:   1450856
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0018
- NMPDR:   fig|243232.1.peg.18
- TIGR:   MJ0018
- BioCyc:   MJAN243232:MJ_0018-MONOMER
- InterPro:   IPR007166

Pfam domain/function: PF04021 Class_IIIsignal

EC number: NA

Molecular weight: Translated: 56566; Mature: 56566

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xade3ad8)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFKKRKGQLTLEFILLILGMTVVGIVITMGLVEKSPIFIGDKPLEVKKETMGLFINESK
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCEEEEEEECCE
FNLTVENTTISNLGNNNTESNNSNNETGGGYLYIRVSGSSKGLITKDLIVSGDAKDVSGD
EEEEEECCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCH
ISKTINSKCVEENAIGEVYGDIYLEGSANYKLGNLLCINKFQTYLTGSGSLKVYVPYIQE
HHHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCEEEEECEEEEEECCCCEEEEHHHHHH
FIIRDKNSGESQIGGSVSLTVGNTNINRFYVEKITGGAKVKFKDFAINTFETNSGNFGGG
HHEECCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCEEEEEEEEEEEEEECCCCCCCCC
AETVFENGRISTMKLGDIVSGGNVKFKNVNIGNMIINNMIGSPTFELSNSTINNMKINKL
CHHEECCCCEEEEEECCEECCCCEEEEEEEHHHHHHHHHCCCCEEEECCCEECCEEEEEE
IGSPKILVEDSSIINSLETDQLGGSDIEVKDGSIIKEITIHGSTGTNGKIFVGYGGKVEK
CCCCEEEEECHHHHCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCEEEEEECCEEEE
LFVEGNINSRIDLKGFSGLIDVSIGNIAGGGKLYVDNVIGNSISTGIIGNNKGLEIEDSS
EEEECCCCCEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCCEEECCC
LSVVNIEGVSNSGSAFIKNTLIYQLKINSLPDWGSDMTLNKVNITKLSINEIRNGKLTIK
EEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEHHHCCCCEEEEE
NSEIGELHITKISGKGKIIVKKSYVNGKYYKKLVIKKSNYKKWS
CCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCH
>Mature Secondary Structure
MIFKKRKGQLTLEFILLILGMTVVGIVITMGLVEKSPIFIGDKPLEVKKETMGLFINESK
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCEEEEEEECCE
FNLTVENTTISNLGNNNTESNNSNNETGGGYLYIRVSGSSKGLITKDLIVSGDAKDVSGD
EEEEEECCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCH
ISKTINSKCVEENAIGEVYGDIYLEGSANYKLGNLLCINKFQTYLTGSGSLKVYVPYIQE
HHHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCEEEEECEEEEEECCCCEEEEHHHHHH
FIIRDKNSGESQIGGSVSLTVGNTNINRFYVEKITGGAKVKFKDFAINTFETNSGNFGGG
HHEECCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCEEEEEEEEEEEEEECCCCCCCCC
AETVFENGRISTMKLGDIVSGGNVKFKNVNIGNMIINNMIGSPTFELSNSTINNMKINKL
CHHEECCCCEEEEEECCEECCCCEEEEEEEHHHHHHHHHCCCCEEEECCCEECCEEEEEE
IGSPKILVEDSSIINSLETDQLGGSDIEVKDGSIIKEITIHGSTGTNGKIFVGYGGKVEK
CCCCEEEEECHHHHCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCEEEEEECCEEEE
LFVEGNINSRIDLKGFSGLIDVSIGNIAGGGKLYVDNVIGNSISTGIIGNNKGLEIEDSS
EEEECCCCCEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCCEEECCC
LSVVNIEGVSNSGSAFIKNTLIYQLKINSLPDWGSDMTLNKVNITKLSINEIRNGKLTIK
EEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEHHHCCCCEEEEE
NSEIGELHITKISGKGKIIVKKSYVNGKYYKKLVIKKSNYKKWS
CCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087